RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 SLC13A4Q9UKG4 626 aa12.4□□□□□ -0.42
MSH6-214ENST00000616033 PCDHGB7Q9Y5F8 929 aa12.4□□□□□ -0.42
MSH6-214ENST00000616033 PEX14O75381 377 aa12.4□□□□□ -0.42
MSH6-214ENST00000616033 AHRP35869 848 aa12.4□□□□□ -0.42
MSH6-214ENST00000616033 DEFA5Q01523 94 aa12.4□□□□□ -0.42
MSH6-214ENST00000616033 LYPLAL1Q5VWZ2 237 aa12.4□□□□□ -0.42
MSH6-214ENST00000616033 TIGD3Q6B0B8 471 aa12.4□□□□□ -0.42
MSH6-214ENST00000616033 QSOX2Q6ZRP7 698 aa12.4□□□□□ -0.42
MSH6-214ENST00000616033 KIAA0907Q7Z7F0 614 aaPredicted RBP12.4□□□□□ -0.42
MSH6-214ENST00000616033 LINC00518Q8N0U6 118 aa12.4□□□□□ -0.42
MSH6-214ENST00000616033 OR13C5Q8NGS8 318 aa12.4□□□□□ -0.42
MSH6-214ENST00000616033 SORCS1Q8WY21 1168 aa12.4□□□□□ -0.42
MSH6-214ENST00000616033 ORAI1Q96D31 301 aa12.4□□□□□ -0.42
MSH6-214ENST00000616033 ABHD1Q96SE0 405 aa12.4□□□□□ -0.42
MSH6-214ENST00000616033 TRMT61BQ9BVS5 477 aaKnown RBP12.4□□□□□ -0.42
MSH6-214ENST00000616033 GSDMCQ9BYG8 508 aa12.4□□□□□ -0.42
MSH6-214ENST00000616033 PIGUQ9H490 435 aa12.4□□□□□ -0.42
MSH6-214ENST00000616033 RANBP3Q9H6Z4 567 aaPredicted RBP12.4□□□□□ -0.42
MSH6-214ENST00000616033 ELAC1Q9H777 363 aaKnown RBP12.4□□□□□ -0.42
MSH6-214ENST00000616033 ZFP64Q9NPA5 681 aa12.4□□□□□ -0.42
MSH6-214ENST00000616033 DIABLOQ9NR28 239 aa12.4□□□□□ -0.42
MSH6-214ENST00000616033 CACNG2Q9Y698 323 aa12.4□□□□□ -0.42
MSH6-214ENST00000616033 PLXND1Q9Y4D7 1925 aa12.39□□□□□ -0.43
MSH6-214ENST00000616033 TCRBV16S1A1N1A0A5B0 115 aa12.39□□□□□ -0.43
MSH6-214ENST00000616033 FAM170BA6NMN3 283 aa12.39□□□□□ -0.43
MSH6-214ENST00000616033 PPM1DO15297 605 aa12.39□□□□□ -0.43
MSH6-214ENST00000616033 SOD1P00441 154 aa12.39□□□□□ -0.43
MSH6-214ENST00000616033 HLA-DPB1P04440 258 aa12.39□□□□□ -0.43
MSH6-214ENST00000616033 PIPP12273 146 aaPredicted RBP12.39□□□□□ -0.43
MSH6-214ENST00000616033 FUT1P19526 365 aa12.39□□□□□ -0.43
MSH6-214ENST00000616033 SLC1A3P43003 542 aa12.39□□□□□ -0.43
MSH6-214ENST00000616033 HYAL4Q2M3T9 481 aa12.39□□□□□ -0.43
MSH6-214ENST00000616033 FAAP20Q6NZ36 180 aa12.39□□□□□ -0.43
MSH6-214ENST00000616033 SERPINA12Q8IW75 414 aa12.39□□□□□ -0.43
MSH6-214ENST00000616033 DUSP18Q8NEJ0 188 aa12.39□□□□□ -0.43
MSH6-214ENST00000616033 LHFPL5Q8TAF8 219 aa12.39□□□□□ -0.43
MSH6-214ENST00000616033 GIMAP1Q8WWP7 306 aa12.39□□□□□ -0.43
MSH6-214ENST00000616033 DDOQ99489 341 aa12.39□□□□□ -0.43
MSH6-214ENST00000616033 ORAI3Q9BRQ5 295 aa12.39□□□□□ -0.43
MSH6-214ENST00000616033 BHLHE41Q9C0J9 482 aaPredicted RBP12.39□□□□□ -0.43
MSH6-214ENST00000616033 SUV39H2Q9H5I1 410 aa12.39□□□□□ -0.43
MSH6-214ENST00000616033 TAAR2Q9P1P5 351 aa12.39□□□□□ -0.43
MSH6-214ENST00000616033 CFAP97Q9P2B7 532 aa12.39□□□□□ -0.43
MSH6-214ENST00000616033 DPP7Q9UHL4 492 aa12.39□□□□□ -0.43
MSH6-214ENST00000616033 STOML2Q9UJZ1 356 aa12.39□□□□□ -0.43
MSH6-214ENST00000616033 ADAM30Q9UKF2 790 aa12.39□□□□□ -0.43
MSH6-214ENST00000616033 TRBV5-4A0A0C4DH59 114 aa12.39□□□□□ -0.43
MSH6-214ENST00000616033 ZNF98A6NK75 572 aa12.39□□□□□ -0.43
MSH6-214ENST00000616033 FAAHO00519 579 aa12.39□□□□□ -0.43
MSH6-214ENST00000616033 IFNA7P01567 189 aa12.39□□□□□ -0.43
MSH6-214ENST00000616033 CBSLP0DN79 551 aa12.39□□□□□ -0.43
MSH6-214ENST00000616033 POU3F2P20265 443 aaPredicted RBP12.39□□□□□ -0.43
MSH6-214ENST00000616033 CBSP35520 551 aa12.39□□□□□ -0.43
MSH6-214ENST00000616033 AP1S2P56377 157 aa12.39□□□□□ -0.43
MSH6-214ENST00000616033 LMAN2Q12907 356 aa12.39□□□□□ -0.43
MSH6-214ENST00000616033 HIST2H2AA3Q6FI13 130 aa12.39□□□□□ -0.43
MSH6-214ENST00000616033 GRHL2Q6ISB3 625 aa12.39□□□□□ -0.43
MSH6-214ENST00000616033 NR2C2APQ86WQ0 139 aa12.39□□□□□ -0.43
MSH6-214ENST00000616033 CHCHD4Q8N4Q1 142 aa12.39□□□□□ -0.43
MSH6-214ENST00000616033 OR2AP1Q8NGE2 309 aa12.39□□□□□ -0.43
MSH6-214ENST00000616033 CD99L2Q8TCZ2 262 aa12.39□□□□□ -0.43
MSH6-214ENST00000616033 TREX2Q9BQ50 279 aaPredicted RBP12.39□□□□□ -0.43
MSH6-214ENST00000616033 OR10A4Q9H209 315 aa12.39□□□□□ -0.43
MSH6-214ENST00000616033 LRFN2Q9ULH4 789 aa12.39□□□□□ -0.43
MSH6-214ENST00000616033 EDARQ9UNE0 448 aa12.39□□□□□ -0.43
MSH6-214ENST00000616033 BAIAP2Q9UQB8 552 aa12.39□□□□□ -0.43
MSH6-214ENST00000616033 CHST2Q9Y4C5 530 aa12.39□□□□□ -0.43
MSH6-214ENST00000616033 NLRC5Q86WI3 1866 aa12.39□□□□□ -0.43
MSH6-214ENST00000616033 LOC285556D6RIA3 1793 aa12.39□□□□□ -0.43
MSH6-214ENST00000616033 E9PQ18 207 aa12.39□□□□□ -0.43
MSH6-214ENST00000616033 MID1O15344 667 aa12.39□□□□□ -0.43
MSH6-214ENST00000616033 PTHLHP12272 177 aa12.39□□□□□ -0.43
MSH6-214ENST00000616033 GABRA5P31644 462 aa12.39□□□□□ -0.43
MSH6-214ENST00000616033 DGCR2P98153 550 aa12.39□□□□□ -0.43
MSH6-214ENST00000616033 PCDH1Q08174 1060 aa12.39□□□□□ -0.43
MSH6-214ENST00000616033 LASP1Q14847 261 aaKnown RBP12.39□□□□□ -0.43
MSH6-214ENST00000616033 GRIN2CQ14957 1233 aa12.39□□□□□ -0.43
MSH6-214ENST00000616033 GRK1Q15835 563 aa12.39□□□□□ -0.43
MSH6-214ENST00000616033 ZNF750Q32MQ0 723 aa12.39□□□□□ -0.43
MSH6-214ENST00000616033 PIP5KL1Q5T9C9 394 aa12.39□□□□□ -0.43
MSH6-214ENST00000616033 SLC24A5Q71RS6 500 aa12.39□□□□□ -0.43
MSH6-214ENST00000616033 HDDC2Q7Z4H3 204 aa12.39□□□□□ -0.43
MSH6-214ENST00000616033 CACUL1Q86Y37 369 aa12.39□□□□□ -0.43
MSH6-214ENST00000616033 TMEM151BQ8IW70 566 aa12.39□□□□□ -0.43
MSH6-214ENST00000616033 ZNF480Q8WV37 535 aa12.39□□□□□ -0.43
MSH6-214ENST00000616033 TINAGL1Q9GZM7 467 aaPredicted RBP12.39□□□□□ -0.43
MSH6-214ENST00000616033 OR51I1Q9H343 314 aa12.39□□□□□ -0.43
MSH6-214ENST00000616033 DPAGT1Q9H3H5 408 aa12.39□□□□□ -0.43
MSH6-214ENST00000616033 WSB2Q9NYS7 404 aaPredicted RBP12.39□□□□□ -0.43
MSH6-214ENST00000616033 ALPK3Q96L96 1907 aa12.38□□□□□ -0.43
MSH6-214ENST00000616033 TO15178 435 aa12.38□□□□□ -0.43
MSH6-214ENST00000616033 TCRBP04435 133 aa12.38□□□□□ -0.43
MSH6-214ENST00000616033 FOSL1P15407 271 aa12.38□□□□□ -0.43
MSH6-214ENST00000616033 LIMS1P48059 325 aa12.38□□□□□ -0.43
MSH6-214ENST00000616033 PXNP49023 591 aaPredicted RBP12.38□□□□□ -0.43
MSH6-214ENST00000616033 PUDPQ08623 228 aa12.38□□□□□ -0.43
MSH6-214ENST00000616033 C12orf73Q69YU5 71 aa12.38□□□□□ -0.43
MSH6-214ENST00000616033 SLC27A4Q6P1M0 643 aa12.38□□□□□ -0.43
MSH6-214ENST00000616033 ZNF782Q6ZMW2 699 aaPredicted RBP12.38□□□□□ -0.43
MSH6-214ENST00000616033 RTL4Q6ZR62 310 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms