RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 CHST2Q9Y4C5 530 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 PCDHGA6Q9Y5G7 932 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 TLCD2A6NGC4 264 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 SIGLEC6O43699 453 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 UGT2B11O75310 529 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 DNAJB5O75953 348 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 CBX7O95931 251 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 HTR1AP08908 422 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 ALOX5P09917 674 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 CCNYL3P0C7X3 344 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 RNH1P13489 461 aaKnown RBP3.2□□□□□ -1.9
LIG4-205ENST00000614526 GNSP15586 552 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 CDH2P19022 906 aaPredicted RBP3.2□□□□□ -1.9
LIG4-205ENST00000614526 CHMP24386 653 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 CNR2P34972 360 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 MASP1P48740 699 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 MAN2A2P49641 1150 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 RGS19P49795 217 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 RAB38P57729 211 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 DUSP8Q13202 625 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 NPTX1Q15818 432 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 PRTGQ2VWP7 1150 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 PUS10Q3MIT2 529 aaKnown RBP3.2□□□□□ -1.9
LIG4-205ENST00000614526 PERM1Q5SV97 790 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 DCST2Q5T1A1 773 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 FAHD1Q6P587 224 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 FRRS1Q6ZNA5 592 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 RRM2BQ7LG56 351 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 CCDC103Q8IW40 242 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 RBM12BQ8IXT5 1001 aaKnown RBP3.2□□□□□ -1.9
LIG4-205ENST00000614526 UBALD2Q8IYN6 164 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 GPR135Q8IZ08 494 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 OR2L13Q8N349 312 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 OR4K5Q8NGD3 323 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 OR1L3Q8NH93 324 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 ADAMTS16Q8TE57 1224 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 GRHL3Q8TE85 626 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 THAP3Q8WTV1 239 aaPredicted RBP3.2□□□□□ -1.9
LIG4-205ENST00000614526 APOBEC4Q8WW27 367 aaKnown RBP3.2□□□□□ -1.9
LIG4-205ENST00000614526 DGCR14Q96DF8 476 aaKnown RBP3.2□□□□□ -1.9
LIG4-205ENST00000614526 THAP11Q96EK4 314 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 MCHR1Q99705 422 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 CTRCQ99895 268 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 APOL4Q9BPW4 351 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 POLR2J3Q9H1A7 115 aaKnown RBP3.2□□□□□ -1.9
LIG4-205ENST00000614526 DUSP15Q9H1R2 295 aaPredicted RBP3.2□□□□□ -1.9
LIG4-205ENST00000614526 LYRM4Q9HD34 91 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 THSD1Q9NS62 852 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 CUTCQ9NTM9 273 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 SEMA4GQ9NTN9 838 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 TAS2R16Q9NYV7 291 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.2□□□□□ -1.97e-9■■■■■ 38.5
LIG4-205ENST00000614526 RNF6Q9Y252 685 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 OR10H1Q9Y4A9 318 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 CEPT1Q9Y6K0 416 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 CACNA1HO95180 2353 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 A0A0G2JPF8 293 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 C17orf51A8MQB3 221 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 HNRNPCL2B2RXH8 293 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 HNRNPCL3B7ZW38 293 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 CLDN4O14493 209 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 SLC16A6O15403 523 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 ZNF749O43361 778 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 DUX1O43812 170 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 PIP5K1CO60331 668 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 SRPX2O60687 465 aaPredicted RBP3.2□□□□□ -1.9
LIG4-205ENST00000614526 LGI1O95970 557 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 HNRNPCL4P0DMR1 293 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 ANXA8P13928 327 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 MMP11P24347 488 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 PSMB9P28065 219 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 KRT20P35900 424 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 GPR4P46093 362 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 GSTM5P46439 218 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 HLCSP50747 726 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 ANXA11P50995 505 aaKnown RBP3.2□□□□□ -1.9
LIG4-205ENST00000614526 ZXDAP98168 799 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 MGAT2Q10469 447 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 MAD2L1BPQ15013 274 aaPredicted RBP3.2□□□□□ -1.9
LIG4-205ENST00000614526 NDUFA9Q16795 377 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 RFX4Q33E94 735 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 KCTD21Q4G0X4 260 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 ENTPD8Q5MY95 495 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 TYW3Q6IPR3 259 aaKnown RBP3.2□□□□□ -1.9
LIG4-205ENST00000614526 OGFOD3Q6PK18 319 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 ZNF730Q6ZMV8 503 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 C16orf47Q6ZP98 133 aaPredicted RBP3.2□□□□□ -1.9
LIG4-205ENST00000614526 PLEKHM3Q6ZWE6 761 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 PRICKLE2Q7Z3G6 844 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 ZER1Q7Z7L7 766 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 SPARTQ8N0X7 666 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 BBS10Q8TAM1 723 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 SFXN5Q8TD22 340 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 TANKQ92844 425 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 EFHD2Q96C19 240 aaPredicted RBP3.2□□□□□ -1.9
LIG4-205ENST00000614526 FAM46AQ96IP4 442 aaKnown RBP3.2□□□□□ -1.9
LIG4-205ENST00000614526 DGAT2Q96PD7 388 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 GAL3ST4Q96RP7 486 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 NODALQ96S42 347 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 LHPPQ9H008 270 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms