RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 KIF25Q9UIL4 384 aa20.64■□□□□ 0.89
POLR2J3-220ENST00000613744 TRBV5-4A0A0C4DH59 114 aa20.63■□□□□ 0.89
POLR2J3-220ENST00000613744 PIPSLA2A3N6 862 aa20.63■□□□□ 0.89
POLR2J3-220ENST00000613744 UPK3BL1B0FP48 263 aa20.63■□□□□ 0.89
POLR2J3-220ENST00000613744 UPK3BL2E5RIL1 263 aa20.63■□□□□ 0.89
POLR2J3-220ENST00000613744 KHNYNO15037 678 aaKnown RBP20.63■□□□□ 0.89
POLR2J3-220ENST00000613744 ADRB3P13945 408 aa20.63■□□□□ 0.89
POLR2J3-220ENST00000613744 HSD3B1P14060 373 aa20.63■□□□□ 0.89
POLR2J3-220ENST00000613744 BPIP17213 487 aa20.63■□□□□ 0.89
POLR2J3-220ENST00000613744 ITGALP20701 1170 aa20.63■□□□□ 0.89
POLR2J3-220ENST00000613744 C5AR1P21730 350 aa20.63■□□□□ 0.89
POLR2J3-220ENST00000613744 HSD3B2P26439 372 aa20.63■□□□□ 0.89
POLR2J3-220ENST00000613744 MVDP53602 400 aa20.63■□□□□ 0.89
POLR2J3-220ENST00000613744 EXOSC2Q13868 293 aaKnown RBP20.63■□□□□ 0.89
POLR2J3-220ENST00000613744 CRTC2Q53ET0 693 aaPredicted RBP20.63■□□□□ 0.89
POLR2J3-220ENST00000613744 OXR1Q8N573 874 aa20.63■□□□□ 0.89
POLR2J3-220ENST00000613744 OR52I1Q8NGK6 324 aa20.63■□□□□ 0.89
POLR2J3-220ENST00000613744 ACOT12Q8WYK0 555 aa20.63■□□□□ 0.89
POLR2J3-220ENST00000613744 GHITMQ9H3K2 345 aa20.63■□□□□ 0.89
POLR2J3-220ENST00000613744 VPS29Q9UBQ0 182 aa20.63■□□□□ 0.89
POLR2J3-220ENST00000613744 TESQ9UGI8 421 aaKnown RBP20.63■□□□□ 0.89
POLR2J3-220ENST00000613744 PRAMEF33A0A0G2JMD5 474 aa20.63■□□□□ 0.89
POLR2J3-220ENST00000613744 CIB4A0PJX0 185 aa20.63■□□□□ 0.89
POLR2J3-220ENST00000613744 J3KTA2 159 aa20.63■□□□□ 0.89
POLR2J3-220ENST00000613744 PRAMEF10O60809 474 aa20.63■□□□□ 0.89
POLR2J3-220ENST00000613744 IFNW1P05000 195 aa20.63■□□□□ 0.89
POLR2J3-220ENST00000613744 CRATP43155 626 aa20.63■□□□□ 0.89
POLR2J3-220ENST00000613744 BDKRB1P46663 353 aa20.63■□□□□ 0.89
POLR2J3-220ENST00000613744 AGFG1P52594 562 aaKnown RBP20.63■□□□□ 0.89
POLR2J3-220ENST00000613744 EEF1A2Q05639 463 aaKnown RBP20.63■□□□□ 0.89
POLR2J3-220ENST00000613744 NFE2L1Q14494 772 aa20.63■□□□□ 0.89
POLR2J3-220ENST00000613744 FLYWCH1Q4VC44 716 aa20.63■□□□□ 0.89
POLR2J3-220ENST00000613744 ZNF655Q8N720 491 aaPredicted RBP20.63■□□□□ 0.89
POLR2J3-220ENST00000613744 FRMD1Q8N878 549 aa20.63■□□□□ 0.89
POLR2J3-220ENST00000613744 RLN3Q8WXF3 142 aa20.63■□□□□ 0.89
POLR2J3-220ENST00000613744 NUMA1Q14980 2115 aa20.62■□□□□ 0.89
POLR2J3-220ENST00000613744 CACNA1IQ9P0X4 2223 aa20.62■□□□□ 0.89
POLR2J3-220ENST00000613744 A0A1W2PRG6 482 aa20.62■□□□□ 0.89
POLR2J3-220ENST00000613744 CASKO14936 926 aa20.62■□□□□ 0.89
POLR2J3-220ENST00000613744 PRKYO43930 277 aa20.62■□□□□ 0.89
POLR2J3-220ENST00000613744 RPS25P62851 125 aaKnown RBP20.62■□□□□ 0.89
POLR2J3-220ENST00000613744 ALDH6A1Q02252 535 aaKnown RBP20.62■□□□□ 0.89
POLR2J3-220ENST00000613744 GPR176Q14439 515 aa20.62■□□□□ 0.89
POLR2J3-220ENST00000613744 PIP5KL1Q5T9C9 394 aa20.62■□□□□ 0.89
POLR2J3-220ENST00000613744 LIPJQ5W064 366 aa20.62■□□□□ 0.89
POLR2J3-220ENST00000613744 TIGD4Q8IY51 512 aa20.62■□□□□ 0.89
POLR2J3-220ENST00000613744 C11orf24Q96F05 449 aaPredicted RBP20.62■□□□□ 0.89
POLR2J3-220ENST00000613744 POLDIP3Q9BY77 421 aaKnown RBP20.62■□□□□ 0.89
POLR2J3-220ENST00000613744 FBRSQ9HAH7 460 aa20.62■□□□□ 0.89
POLR2J3-220ENST00000613744 MAB21L2Q9Y586 359 aa20.62■□□□□ 0.89
POLR2J3-220ENST00000613744 GABRR3A8MPY1 467 aa20.62■□□□□ 0.89
POLR2J3-220ENST00000613744 TSPAN4O14817 238 aa20.62■□□□□ 0.89
POLR2J3-220ENST00000613744 LZTS3O60299 673 aaPredicted RBP20.62■□□□□ 0.89
POLR2J3-220ENST00000613744 XKP51811 444 aa20.62■□□□□ 0.89
POLR2J3-220ENST00000613744 CDKN3Q16667 212 aa20.62■□□□□ 0.89
POLR2J3-220ENST00000613744 SPIN4Q56A73 249 aa20.62■□□□□ 0.89
POLR2J3-220ENST00000613744 AGBL4Q5VU57 503 aa20.62■□□□□ 0.89
POLR2J3-220ENST00000613744 MBOAT1Q6ZNC8 495 aa20.62■□□□□ 0.89
POLR2J3-220ENST00000613744 ASPGQ86U10 573 aa20.62■□□□□ 0.89
POLR2J3-220ENST00000613744 WRAP53Q9BUR4 548 aaKnown RBP20.62■□□□□ 0.89
POLR2J3-220ENST00000613744 ABCG8Q9H221 673 aa20.62■□□□□ 0.89
POLR2J3-220ENST00000613744 FGF20Q9NP95 211 aaPredicted RBP20.62■□□□□ 0.89
POLR2J3-220ENST00000613744 DNAJC11Q9NVH1 559 aa20.62■□□□□ 0.89
POLR2J3-220ENST00000613744 MED9Q9NWA0 146 aa20.62■□□□□ 0.89
POLR2J3-220ENST00000613744 PPIL1Q9Y3C6 166 aa20.62■□□□□ 0.89
POLR2J3-220ENST00000613744 PRSS21Q9Y6M0 314 aa20.62■□□□□ 0.89
POLR2J3-220ENST00000613744 TSPAN11A1L157 253 aa20.61■□□□□ 0.89
POLR2J3-220ENST00000613744 SPINT1O43278 529 aa20.61■□□□□ 0.89
POLR2J3-220ENST00000613744 PPM1BO75688 479 aa20.61■□□□□ 0.89
POLR2J3-220ENST00000613744 SNAPC5O75971 98 aa20.61■□□□□ 0.89
POLR2J3-220ENST00000613744 WDPCPO95876 746 aa20.61■□□□□ 0.89
POLR2J3-220ENST00000613744 C8GP07360 202 aa20.61■□□□□ 0.89
POLR2J3-220ENST00000613744 ICAM2P13598 275 aa20.61■□□□□ 0.89
POLR2J3-220ENST00000613744 ACRV1P26436 265 aa20.61■□□□□ 0.89
POLR2J3-220ENST00000613744 AOAHP28039 575 aa20.61■□□□□ 0.89
POLR2J3-220ENST00000613744 CCT3P49368 545 aaKnown RBP20.61■□□□□ 0.89
POLR2J3-220ENST00000613744 TPMTP51580 245 aa20.61■□□□□ 0.89
POLR2J3-220ENST00000613744 EPHA4P54764 986 aa20.61■□□□□ 0.89
POLR2J3-220ENST00000613744 PCBP3P57721 371 aaKnown RBP20.61■□□□□ 0.89
POLR2J3-220ENST00000613744 ACSM2AQ08AH3 577 aa20.61■□□□□ 0.89
POLR2J3-220ENST00000613744 DMWDQ09019 674 aa20.61■□□□□ 0.89
POLR2J3-220ENST00000613744 ACSM2BQ68CK6 577 aa20.61■□□□□ 0.89
POLR2J3-220ENST00000613744 TRIM40Q6P9F5 258 aa20.61■□□□□ 0.89
POLR2J3-220ENST00000613744 PAQR6Q6TCH4 344 aa20.61■□□□□ 0.89
POLR2J3-220ENST00000613744 RTL4Q6ZR62 310 aa20.61■□□□□ 0.89
POLR2J3-220ENST00000613744 PRICKLE2Q7Z3G6 844 aa20.61■□□□□ 0.89
POLR2J3-220ENST00000613744 FAM160A2Q8N612 972 aaPredicted RBP20.61■□□□□ 0.89
POLR2J3-220ENST00000613744 OR14C36Q8NHC7 312 aa20.61■□□□□ 0.89
POLR2J3-220ENST00000613744 NFKBIDQ8NI38 313 aa20.61■□□□□ 0.89
POLR2J3-220ENST00000613744 PMEPA1Q969W9 287 aa20.61■□□□□ 0.89
POLR2J3-220ENST00000613744 BOCQ9BWV1 1114 aa20.61■□□□□ 0.89
POLR2J3-220ENST00000613744 SLC12A9Q9BXP2 914 aa20.61■□□□□ 0.89
POLR2J3-220ENST00000613744 HDAC8Q9BY41 377 aa20.61■□□□□ 0.89
POLR2J3-220ENST00000613744 GSX2Q9BZM3 304 aa20.61■□□□□ 0.89
POLR2J3-220ENST00000613744 BHLHE41Q9C0J9 482 aaPredicted RBP20.61■□□□□ 0.89
POLR2J3-220ENST00000613744 ZSCAN32Q9NX65 697 aa20.61■□□□□ 0.89
POLR2J3-220ENST00000613744 CYP8B1Q9UNU6 501 aa20.61■□□□□ 0.89
POLR2J3-220ENST00000613744 ANGPT4Q9Y264 503 aa20.61■□□□□ 0.89
POLR2J3-220ENST00000613744 CACNB4O00305 520 aaPredicted RBP20.6■□□□□ 0.89
POLR2J3-220ENST00000613744 FAAHO00519 579 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms