RNA–Protein interactions for RNA: ENST00000609024.5

CHMP4A-211, Transcript of charged multivesicular body protein 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4A, Length 735 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-211ENST00000609024 MRPL1Q9BYD6 325 aaKnown RBP15.63■□□□□ 0.09
CHMP4A-211ENST00000609024 REG4Q9BYZ8 158 aa15.63■□□□□ 0.09
CHMP4A-211ENST00000609024 PTGES2Q9H7Z7 377 aa15.63■□□□□ 0.09
CHMP4A-211ENST00000609024 RNF122Q9H9V4 155 aa15.63■□□□□ 0.09
CHMP4A-211ENST00000609024 STOML1Q9UBI4 398 aa15.63■□□□□ 0.09
CHMP4A-211ENST00000609024 TCRBV9S1A1TA0A576 114 aa15.62■□□□□ 0.09
CHMP4A-211ENST00000609024 H3BML4 177 aa15.62■□□□□ 0.09
CHMP4A-211ENST00000609024 ESRRBO95718 433 aa15.62■□□□□ 0.09
CHMP4A-211ENST00000609024 CGAP01215 116 aa15.62■□□□□ 0.09
CHMP4A-211ENST00000609024 DLG1Q12959 904 aa15.62■□□□□ 0.09
CHMP4A-211ENST00000609024 CALCOCO2Q13137 446 aa15.62■□□□□ 0.09
CHMP4A-211ENST00000609024 TRMT12Q53H54 448 aaKnown RBP15.62■□□□□ 0.09
CHMP4A-211ENST00000609024 C3orf62Q6ZUJ4 267 aa15.62■□□□□ 0.09
CHMP4A-211ENST00000609024 L3MBTL4Q8NA19 623 aa15.62■□□□□ 0.09
CHMP4A-211ENST00000609024 RHEBL1Q8TAI7 183 aa15.62■□□□□ 0.09
CHMP4A-211ENST00000609024 TRPC4APQ8TEL6 797 aa15.62■□□□□ 0.09
CHMP4A-211ENST00000609024 NXNL1Q96CM4 212 aa15.62■□□□□ 0.09
CHMP4A-211ENST00000609024 TACO1Q9BSH4 297 aaKnown RBP15.62■□□□□ 0.09
CHMP4A-211ENST00000609024 DSN1Q9H410 356 aa15.62■□□□□ 0.09
CHMP4A-211ENST00000609024 NOL11Q9H8H0 719 aaKnown RBP15.62■□□□□ 0.09
CHMP4A-211ENST00000609024 SENP1Q9P0U3 644 aa15.62■□□□□ 0.09
CHMP4A-211ENST00000609024 CPSF2Q9P2I0 782 aaKnown RBP15.62■□□□□ 0.09
CHMP4A-211ENST00000609024 ZNF639Q9UID6 485 aa15.62■□□□□ 0.09
CHMP4A-211ENST00000609024 GPR55Q9Y2T6 319 aaPredicted RBP15.62■□□□□ 0.09
CHMP4A-211ENST00000609024 SNX24Q9Y343 169 aa15.62■□□□□ 0.09
CHMP4A-211ENST00000609024 OR10H1Q9Y4A9 318 aa15.62■□□□□ 0.09
CHMP4A-211ENST00000609024 RAI1Q7Z5J4 1906 aaPredicted RBP15.62■□□□□ 0.09
CHMP4A-211ENST00000609024 A0A087X1B8 175 aa15.61■□□□□ 0.09
CHMP4A-211ENST00000609024 CCDC189A1A4V9 331 aa15.61■□□□□ 0.09
CHMP4A-211ENST00000609024 SCO2O43819 266 aa15.61■□□□□ 0.09
CHMP4A-211ENST00000609024 CBX7O95931 251 aa15.61■□□□□ 0.09
CHMP4A-211ENST00000609024 MTHFD2P13995 350 aa15.61■□□□□ 0.09
CHMP4A-211ENST00000609024 PCSK2P16519 638 aa15.61■□□□□ 0.09
CHMP4A-211ENST00000609024 LOXP28300 417 aaPredicted RBP15.61■□□□□ 0.09
CHMP4A-211ENST00000609024 CLK3P49761 638 aaKnown RBP15.61■□□□□ 0.09
CHMP4A-211ENST00000609024 EMDP50402 254 aa15.61■□□□□ 0.09
CHMP4A-211ENST00000609024 PNLIPRP2P54317 469 aa15.61■□□□□ 0.09
CHMP4A-211ENST00000609024 MRPS35P82673 323 aaKnown RBP15.61■□□□□ 0.09
CHMP4A-211ENST00000609024 MGAT2Q10469 447 aa15.61■□□□□ 0.09
CHMP4A-211ENST00000609024 GANABQ14697 944 aaKnown RBP15.61■□□□□ 0.09
CHMP4A-211ENST00000609024 SGO1Q5FBB7 561 aa15.61■□□□□ 0.09
CHMP4A-211ENST00000609024 FRG2Q64ET8 278 aa15.61■□□□□ 0.09
CHMP4A-211ENST00000609024 CCDC91Q7Z6B0 441 aa15.61■□□□□ 0.09
CHMP4A-211ENST00000609024 STK32CQ86UX6 486 aa15.61■□□□□ 0.09
CHMP4A-211ENST00000609024 HIPK1Q86Z02 1210 aa15.61■□□□□ 0.09
CHMP4A-211ENST00000609024 KCTD4Q8WVF5 259 aa15.61■□□□□ 0.09
CHMP4A-211ENST00000609024 AKAP1Q92667 903 aaKnown RBP eCLIP15.61■□□□□ 0.09
CHMP4A-211ENST00000609024 CDK15Q96Q40 435 aa15.61■□□□□ 0.09
CHMP4A-211ENST00000609024 FRG2BQ96QU4 278 aa15.61■□□□□ 0.09
CHMP4A-211ENST00000609024 ELOVL6Q9H5J4 265 aa15.61■□□□□ 0.09
CHMP4A-211ENST00000609024 NMRK1Q9NWW6 199 aa15.61■□□□□ 0.09
CHMP4A-211ENST00000609024 SLC12A4Q9UP95 1085 aa15.61■□□□□ 0.09
CHMP4A-211ENST00000609024 SONP18583 2426 aaKnown RBP15.6■□□□□ 0.09
CHMP4A-211ENST00000609024 FAM159BA6NKW6 160 aa15.6■□□□□ 0.09
CHMP4A-211ENST00000609024 KLF4O43474 513 aa15.6■□□□□ 0.09
CHMP4A-211ENST00000609024 CD5LO43866 347 aa15.6■□□□□ 0.09
CHMP4A-211ENST00000609024 PLAUP00749 431 aa15.6■□□□□ 0.09
CHMP4A-211ENST00000609024 GSTA2P09210 222 aa15.6■□□□□ 0.09
CHMP4A-211ENST00000609024 SUCLG1P53597 346 aaKnown RBP15.6■□□□□ 0.09
CHMP4A-211ENST00000609024 CLDN15P56746 228 aa15.6■□□□□ 0.09
CHMP4A-211ENST00000609024 KRTAP1-1Q07627 177 aa15.6■□□□□ 0.09
CHMP4A-211ENST00000609024 LTB4RQ15722 352 aa15.6■□□□□ 0.09
CHMP4A-211ENST00000609024 C22orf34Q6ZV56 151 aa15.6■□□□□ 0.09
CHMP4A-211ENST00000609024 COMMD6Q7Z4G1 85 aa15.6■□□□□ 0.09
CHMP4A-211ENST00000609024 IGFBPL1Q8WX77 278 aa15.6■□□□□ 0.09
CHMP4A-211ENST00000609024 EFHD2Q96C19 240 aaPredicted RBP15.6■□□□□ 0.09
CHMP4A-211ENST00000609024 ZBED6CLQ96FA7 236 aaPredicted RBP15.6■□□□□ 0.09
CHMP4A-211ENST00000609024 BTBD9Q96Q07 612 aa15.6■□□□□ 0.09
CHMP4A-211ENST00000609024 GIMAP4Q9NUV9 329 aa15.6■□□□□ 0.09
CHMP4A-211ENST00000609024 UTS2RQ9UKP6 389 aa15.6■□□□□ 0.09
CHMP4A-211ENST00000609024 CES1P1Q9UKY3 287 aa15.6■□□□□ 0.09
CHMP4A-211ENST00000609024 ZNF337Q9Y3M9 751 aa15.6■□□□□ 0.09
CHMP4A-211ENST00000609024 USF3Q68DE3 2245 aa15.6■□□□□ 0.09
CHMP4A-211ENST00000609024 H0YC42 278 aa15.59■□□□□ 0.09
CHMP4A-211ENST00000609024 EIF3HO15372 352 aaKnown RBP eCLIP15.59■□□□□ 0.092e-6■□□□□ 9.8
CHMP4A-211ENST00000609024 TSPAN2O60636 221 aa15.59■□□□□ 0.09
CHMP4A-211ENST00000609024 SOX30O94993 753 aa15.59■□□□□ 0.09
CHMP4A-211ENST00000609024 THBDP07204 575 aa15.59■□□□□ 0.09
CHMP4A-211ENST00000609024 TPD52P55327 224 aaPredicted RBP15.59■□□□□ 0.09
CHMP4A-211ENST00000609024 CORO7P57737 925 aa15.59■□□□□ 0.09
CHMP4A-211ENST00000609024 B3GALT5-AS1P59052 145 aa15.59■□□□□ 0.09
CHMP4A-211ENST00000609024 STX5Q13190 355 aa15.59■□□□□ 0.09
CHMP4A-211ENST00000609024 CAPRIN1Q14444 709 aaKnown RBP15.59■□□□□ 0.09
CHMP4A-211ENST00000609024 ACAP2Q15057 778 aa15.59■□□□□ 0.09
CHMP4A-211ENST00000609024 METTL2BQ6P1Q9 378 aaKnown RBP15.59■□□□□ 0.09
CHMP4A-211ENST00000609024 BEND4Q6ZU67 534 aa15.59■□□□□ 0.09
CHMP4A-211ENST00000609024 CYS1Q717R9 158 aa15.59■□□□□ 0.09
CHMP4A-211ENST00000609024 METTL4Q8N3J2 472 aa15.59■□□□□ 0.09
CHMP4A-211ENST00000609024 OR5M1Q8NGP8 315 aa15.59■□□□□ 0.09
CHMP4A-211ENST00000609024 OR6K3Q8NGY3 331 aa15.59■□□□□ 0.09
CHMP4A-211ENST00000609024 FBXW5Q969U6 566 aa15.59■□□□□ 0.09
CHMP4A-211ENST00000609024 ACTR6Q9GZN1 396 aa15.59■□□□□ 0.09
CHMP4A-211ENST00000609024 NGBQ9NPG2 151 aa15.59■□□□□ 0.09
CHMP4A-211ENST00000609024 PLSCR4Q9NRQ2 329 aa15.59■□□□□ 0.09
CHMP4A-211ENST00000609024 A8MV72 311 aaPredicted RBP15.58■□□□□ 0.08
CHMP4A-211ENST00000609024 CCDC188H7C350 402 aa15.58■□□□□ 0.08
CHMP4A-211ENST00000609024 HAX1O00165 279 aa15.58■□□□□ 0.08
CHMP4A-211ENST00000609024 CLOCKO15516 846 aa15.58■□□□□ 0.08
CHMP4A-211ENST00000609024 SIX3O95343 332 aaPredicted RBP15.58■□□□□ 0.08
CHMP4A-211ENST00000609024 FESP07332 822 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms