RNA–Protein interactions for RNA: ENST00000607841.5

CTSA-219, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-219ENST00000607841 SF3A3Q12874 501 aaKnown RBP eCLIP13.11□□□□□ -0.31
CTSA-219ENST00000607841 C6orf10Q5SRN2 563 aa13.11□□□□□ -0.31
CTSA-219ENST00000607841 WDR53Q7Z5U6 358 aaPredicted RBP13.11□□□□□ -0.31
CTSA-219ENST00000607841 FUNDC1Q8IVP5 155 aa13.11□□□□□ -0.31
CTSA-219ENST00000607841 COX18Q8N8Q8 333 aa13.11□□□□□ -0.31
CTSA-219ENST00000607841 SLC16A11Q8NCK7 471 aa13.11□□□□□ -0.31
CTSA-219ENST00000607841 OR4N2Q8NGD1 307 aa13.11□□□□□ -0.31
CTSA-219ENST00000607841 GRHL3Q8TE85 626 aa13.11□□□□□ -0.31
CTSA-219ENST00000607841 FAR1Q8WVX9 515 aa13.11□□□□□ -0.31
CTSA-219ENST00000607841 VPS33AQ96AX1 596 aa13.11□□□□□ -0.31
CTSA-219ENST00000607841 ADOQ96SZ5 270 aa13.11□□□□□ -0.31
CTSA-219ENST00000607841 SLC35A5Q9BS91 424 aa13.11□□□□□ -0.31
CTSA-219ENST00000607841 YIPF4Q9BSR8 244 aa13.11□□□□□ -0.31
CTSA-219ENST00000607841 TRIM4Q9C037 500 aa13.11□□□□□ -0.31
CTSA-219ENST00000607841 ZNF385DQ9H6B1 395 aa13.11□□□□□ -0.31
CTSA-219ENST00000607841 OLAHQ9NV23 265 aa13.11□□□□□ -0.31
CTSA-219ENST00000607841 GPATCH2Q9NW75 528 aa13.11□□□□□ -0.31
CTSA-219ENST00000607841 UGT2B11O75310 529 aa13.1□□□□□ -0.31
CTSA-219ENST00000607841 KRT75O95678 551 aa13.1□□□□□ -0.31
CTSA-219ENST00000607841 IL33O95760 270 aa13.1□□□□□ -0.31
CTSA-219ENST00000607841 AGR2O95994 175 aa13.1□□□□□ -0.31
CTSA-219ENST00000607841 ZCCHC18P0CG32 403 aa13.1□□□□□ -0.31
CTSA-219ENST00000607841 ACP2P11117 423 aa13.1□□□□□ -0.31
CTSA-219ENST00000607841 ANXA11P50995 505 aaKnown RBP13.1□□□□□ -0.31
CTSA-219ENST00000607841 GPR85P60893 370 aa13.1□□□□□ -0.31
CTSA-219ENST00000607841 KCNJ2P63252 427 aa13.1□□□□□ -0.31
CTSA-219ENST00000607841 TXNL4AP83876 142 aaKnown RBP13.1□□□□□ -0.31
CTSA-219ENST00000607841 SNTA1Q13424 505 aa13.1□□□□□ -0.31
CTSA-219ENST00000607841 DUSP5Q16690 384 aa13.1□□□□□ -0.31
CTSA-219ENST00000607841 EXOSC6Q5RKV6 272 aaKnown RBP13.1□□□□□ -0.31
CTSA-219ENST00000607841 TMEM81Q6P7N7 255 aa13.1□□□□□ -0.31
CTSA-219ENST00000607841 ANGPTL8Q6UXH0 198 aa13.1□□□□□ -0.31
CTSA-219ENST00000607841 SPATA21Q7Z572 469 aa13.1□□□□□ -0.31
CTSA-219ENST00000607841 ZFP62Q8NB50 900 aaPredicted RBP13.1□□□□□ -0.31
CTSA-219ENST00000607841 OR2M7Q8NG81 312 aa13.1□□□□□ -0.31
CTSA-219ENST00000607841 FBXO30Q8TB52 745 aa13.1□□□□□ -0.31
CTSA-219ENST00000607841 TSPEARQ8WU66 669 aa13.1□□□□□ -0.31
CTSA-219ENST00000607841 C10orf82Q8WW14 230 aa13.1□□□□□ -0.31
CTSA-219ENST00000607841 PIK3R3Q92569 461 aa13.1□□□□□ -0.31
CTSA-219ENST00000607841 HGDQ93099 445 aa13.1□□□□□ -0.31
CTSA-219ENST00000607841 EFHD2Q96C19 240 aaPredicted RBP13.1□□□□□ -0.31
CTSA-219ENST00000607841 NEURL3Q96EH8 262 aa13.1□□□□□ -0.31
CTSA-219ENST00000607841 RMND5BQ96G75 393 aaPredicted RBP13.1□□□□□ -0.31
CTSA-219ENST00000607841 SLC35G5Q96KT7 338 aa13.1□□□□□ -0.31
CTSA-219ENST00000607841 FRMD6Q96NE9 622 aa13.1□□□□□ -0.31
CTSA-219ENST00000607841 TAAR6Q96RI8 345 aa13.1□□□□□ -0.31
CTSA-219ENST00000607841 ELAC2Q9BQ52 826 aaKnown RBP13.1□□□□□ -0.31
CTSA-219ENST00000607841 INPP5KQ9BT40 448 aa13.1□□□□□ -0.31
CTSA-219ENST00000607841 DOHHQ9BU89 302 aa13.1□□□□□ -0.31
CTSA-219ENST00000607841 G6PC3Q9BUM1 346 aa13.1□□□□□ -0.31
CTSA-219ENST00000607841 BTBD2Q9BX70 525 aa13.1□□□□□ -0.31
CTSA-219ENST00000607841 FAM107BQ9H098 131 aa13.1□□□□□ -0.31
CTSA-219ENST00000607841 METTL7AQ9H8H3 244 aa13.1□□□□□ -0.31
CTSA-219ENST00000607841 SERHLQ9NQF3 203 aa13.1□□□□□ -0.31
CTSA-219ENST00000607841 ASF1BQ9NVP2 202 aa13.1□□□□□ -0.31
CTSA-219ENST00000607841 FAM53CQ9NYF3 392 aa13.1□□□□□ -0.31
CTSA-219ENST00000607841 CNOT11Q9UKZ1 510 aaKnown RBP13.1□□□□□ -0.31
CTSA-219ENST00000607841 BOKQ9UMX3 212 aaPredicted RBP13.1□□□□□ -0.31
CTSA-219ENST00000607841 A0A1W2PP18 115 aa13.09□□□□□ -0.31
CTSA-219ENST00000607841 ACOT7O00154 380 aa13.09□□□□□ -0.31
CTSA-219ENST00000607841 CCDC22O60826 627 aa13.09□□□□□ -0.31
CTSA-219ENST00000607841 AK1P00568 194 aa13.09□□□□□ -0.31
CTSA-219ENST00000607841 GSNP06396 782 aa13.09□□□□□ -0.31
CTSA-219ENST00000607841 ZNF24P17028 368 aa13.09□□□□□ -0.31
CTSA-219ENST00000607841 ADSLP30566 484 aaPredicted RBP13.09□□□□□ -0.31
CTSA-219ENST00000607841 LCN1P31025 176 aa13.09□□□□□ -0.31
CTSA-219ENST00000607841 CASP3P42574 277 aa13.09□□□□□ -0.31
CTSA-219ENST00000607841 CDKN2CP42773 168 aa13.09□□□□□ -0.31
CTSA-219ENST00000607841 MAGEA8P43361 318 aa13.09□□□□□ -0.31
CTSA-219ENST00000607841 RFX3P48380 749 aa13.09□□□□□ -0.31
CTSA-219ENST00000607841 CLK3P49761 638 aaKnown RBP13.09□□□□□ -0.31
CTSA-219ENST00000607841 POU6F2P78424 691 aaPredicted RBP13.09□□□□□ -0.31
CTSA-219ENST00000607841 ALDH6A1Q02252 535 aaKnown RBP13.09□□□□□ -0.31
CTSA-219ENST00000607841 PLGLB1Q02325 96 aa13.09□□□□□ -0.31
CTSA-219ENST00000607841 PRR30Q53SZ7 412 aaPredicted RBP13.09□□□□□ -0.31
CTSA-219ENST00000607841 PRAMEF20Q5VT98 475 aa13.09□□□□□ -0.31
CTSA-219ENST00000607841 SAXO2Q658L1 398 aa13.09□□□□□ -0.31
CTSA-219ENST00000607841 SLC30A6Q6NXT4 461 aa13.09□□□□□ -0.31
CTSA-219ENST00000607841 PACS2Q86VP3 889 aa13.09□□□□□ -0.31
CTSA-219ENST00000607841 ATCAYQ86WG3 371 aa13.09□□□□□ -0.31
CTSA-219ENST00000607841 CLEC4FQ8N1N0 589 aa13.09□□□□□ -0.31
CTSA-219ENST00000607841 MIPOL1Q8TD10 442 aa13.09□□□□□ -0.31
CTSA-219ENST00000607841 GTF2H4Q92759 462 aa13.09□□□□□ -0.31
CTSA-219ENST00000607841 PHF12Q96QT6 1004 aa13.09□□□□□ -0.31
CTSA-219ENST00000607841 OR7D2Q96RA2 312 aa13.09□□□□□ -0.31
CTSA-219ENST00000607841 BARD1Q99728 777 aaKnown RBP13.09□□□□□ -0.31
CTSA-219ENST00000607841 ANGPTL4Q9BY76 406 aa13.09□□□□□ -0.31
CTSA-219ENST00000607841 DEPPQ9NTK1 212 aa13.09□□□□□ -0.31
CTSA-219ENST00000607841 EXD2Q9NVH0 621 aa13.09□□□□□ -0.31
CTSA-219ENST00000607841 KLRF1Q9NZS2 232 aa13.09□□□□□ -0.31
CTSA-219ENST00000607841 NTNG1Q9Y2I2 539 aa13.09□□□□□ -0.31
CTSA-219ENST00000607841 NDUFAF1Q9Y375 327 aa13.09□□□□□ -0.31
CTSA-219ENST00000607841 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.09□□□□□ -0.31
CTSA-219ENST00000607841 TLN1Q9Y490 2541 aaKnown RBP13.09□□□□□ -0.31
CTSA-219ENST00000607841 CROCCQ5TZA2 2017 aa13.08□□□□□ -0.31
CTSA-219ENST00000607841 A0A096LPI6 279 aa13.08□□□□□ -0.32
CTSA-219ENST00000607841 GXYLT2A0PJZ3 443 aa13.08□□□□□ -0.32
CTSA-219ENST00000607841 PRAMEF25A6NGN4 478 aa13.08□□□□□ -0.32
CTSA-219ENST00000607841 G3V3Y1 287 aa13.08□□□□□ -0.32
CTSA-219ENST00000607841 ANGPT2O15123 496 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms