RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 PEX5LQ8IYB4 626 aa20.06■□□□□ 0.8
USP6NL-204ENST00000606752 OR4D11Q8NGI4 311 aa20.06■□□□□ 0.8
USP6NL-204ENST00000606752 VANGL1Q8TAA9 524 aaPredicted RBP20.06■□□□□ 0.8
USP6NL-204ENST00000606752 CYGBQ8WWM9 190 aa20.06■□□□□ 0.8
USP6NL-204ENST00000606752 PMM1Q92871 262 aa20.06■□□□□ 0.8
USP6NL-204ENST00000606752 SENP5Q96HI0 755 aaPredicted RBP20.06■□□□□ 0.8
USP6NL-204ENST00000606752 CACYBPQ9HB71 228 aaKnown RBP20.06■□□□□ 0.8
USP6NL-204ENST00000606752 APMAPQ9HDC9 416 aa20.06■□□□□ 0.8
USP6NL-204ENST00000606752 ACER3Q9NUN7 267 aa20.06■□□□□ 0.8
USP6NL-204ENST00000606752 CTSFQ9UBX1 484 aa20.06■□□□□ 0.8
USP6NL-204ENST00000606752 MKL2Q9ULH7 1088 aa20.06■□□□□ 0.8
USP6NL-204ENST00000606752 ZNF232Q9UNY5 417 aa20.06■□□□□ 0.8
USP6NL-204ENST00000606752 PCDHGA8Q9Y5G5 932 aa20.06■□□□□ 0.8
USP6NL-204ENST00000606752 MAGEA13PA6NCF6 341 aa20.06■□□□□ 0.8
USP6NL-204ENST00000606752 H0YAE9 185 aa20.06■□□□□ 0.8
USP6NL-204ENST00000606752 ONECUT2O95948 504 aa20.06■□□□□ 0.8
USP6NL-204ENST00000606752 CDH12P55289 794 aa20.06■□□□□ 0.8
USP6NL-204ENST00000606752 DCDP81605 110 aaKnown RBP20.06■□□□□ 0.8
USP6NL-204ENST00000606752 GK3PQ14409 553 aa20.06■□□□□ 0.8
USP6NL-204ENST00000606752 NSDHLQ15738 373 aa20.06■□□□□ 0.8
USP6NL-204ENST00000606752 RFX4Q33E94 735 aa20.06■□□□□ 0.8
USP6NL-204ENST00000606752 DHRS4L2Q6PKH6 230 aa20.06■□□□□ 0.8
USP6NL-204ENST00000606752 LAPTM4BQ86VI4 370 aa20.06■□□□□ 0.8
USP6NL-204ENST00000606752 CYP4Z1Q86W10 505 aa20.06■□□□□ 0.8
USP6NL-204ENST00000606752 VRK2Q86Y07 508 aa20.06■□□□□ 0.8
USP6NL-204ENST00000606752 ZNF619Q8N2I2 560 aa20.06■□□□□ 0.8
USP6NL-204ENST00000606752 ZNF615Q8N8J6 731 aa20.06■□□□□ 0.8
USP6NL-204ENST00000606752 PLPP5Q8NEB5 264 aa20.06■□□□□ 0.8
USP6NL-204ENST00000606752 OR4C15Q8NGM1 316 aa20.06■□□□□ 0.8
USP6NL-204ENST00000606752 RNF31Q96EP0 1072 aa20.06■□□□□ 0.8
USP6NL-204ENST00000606752 WFDC6Q9BQY6 131 aa20.06■□□□□ 0.8
USP6NL-204ENST00000606752 VN1R1Q9GZP7 353 aa20.06■□□□□ 0.8
USP6NL-204ENST00000606752 POLE3Q9NRF9 147 aa20.06■□□□□ 0.8
USP6NL-204ENST00000606752 TMEFF2Q9UIK5 374 aaPredicted RBP20.06■□□□□ 0.8
USP6NL-204ENST00000606752 C3orf18Q9UK00 162 aa20.06■□□□□ 0.8
USP6NL-204ENST00000606752 KCND3Q9UK17 655 aa20.06■□□□□ 0.8
USP6NL-204ENST00000606752 HCN4Q9Y3Q4 1203 aa20.06■□□□□ 0.8
USP6NL-204ENST00000606752 SPEGQ15772 3267 aa20.05■□□□□ 0.8
USP6NL-204ENST00000606752 GXYLT2A0PJZ3 443 aa20.05■□□□□ 0.8
USP6NL-204ENST00000606752 TTC36A6NLP5 189 aa20.05■□□□□ 0.8
USP6NL-204ENST00000606752 POLR1CO15160 346 aaPredicted RBP20.05■□□□□ 0.8
USP6NL-204ENST00000606752 UBTFL6P0CB48 400 aaPredicted RBP20.05■□□□□ 0.8
USP6NL-204ENST00000606752 EFNA3P52797 238 aa20.05■□□□□ 0.8
USP6NL-204ENST00000606752 ADARB1P78563 741 aaKnown RBP20.05■□□□□ 0.8
USP6NL-204ENST00000606752 OCA2Q04671 838 aa20.05■□□□□ 0.8
USP6NL-204ENST00000606752 ELAVL1Q15717 326 aaKnown RBP20.05■□□□□ 0.8
USP6NL-204ENST00000606752 ZIK1Q3SY52 487 aaPredicted RBP20.05■□□□□ 0.8
USP6NL-204ENST00000606752 UGT2A3Q6UWM9 527 aa20.05■□□□□ 0.8
USP6NL-204ENST00000606752 RBM45Q8IUH3 476 aaKnown RBP20.05■□□□□ 0.8
USP6NL-204ENST00000606752 LACC1Q8IV20 430 aa20.05■□□□□ 0.8
USP6NL-204ENST00000606752 PRSS58Q8IYP2 241 aa20.05■□□□□ 0.8
USP6NL-204ENST00000606752 BMPERQ8N8U9 685 aa20.05■□□□□ 0.8
USP6NL-204ENST00000606752 SUMF1Q8NBK3 374 aa20.05■□□□□ 0.8
USP6NL-204ENST00000606752 C16orf52Q8NHV5 167 aa20.05■□□□□ 0.8
USP6NL-204ENST00000606752 STT3BQ8TCJ2 826 aa20.05■□□□□ 0.8
USP6NL-204ENST00000606752 PRODH2Q9UF12 536 aa20.05■□□□□ 0.8
USP6NL-204ENST00000606752 SLC13A4Q9UKG4 626 aa20.05■□□□□ 0.8
USP6NL-204ENST00000606752 ORC6Q9Y5N6 252 aa20.05■□□□□ 0.8
USP6NL-204ENST00000606752 CLCA3PQ9Y6N3 262 aa20.05■□□□□ 0.8
USP6NL-204ENST00000606752 SYNDIG1LA6NDD5 238 aa20.04■□□□□ 0.8
USP6NL-204ENST00000606752 AGAP5A6NIR3 686 aa20.04■□□□□ 0.8
USP6NL-204ENST00000606752 M0R3H8 397 aa20.04■□□□□ 0.8
USP6NL-204ENST00000606752 FFAR1O14842 300 aa20.04■□□□□ 0.8
USP6NL-204ENST00000606752 GADD45GO95257 159 aa20.04■□□□□ 0.8
USP6NL-204ENST00000606752 LYNP07948 512 aa20.04■□□□□ 0.8
USP6NL-204ENST00000606752 DAPP51397 102 aa20.04■□□□□ 0.8
USP6NL-204ENST00000606752 CHN2P52757 468 aa20.04■□□□□ 0.8
USP6NL-204ENST00000606752 RAD23AP54725 363 aa20.04■□□□□ 0.8
USP6NL-204ENST00000606752 GANABQ14697 944 aaKnown RBP20.04■□□□□ 0.8
USP6NL-204ENST00000606752 LARS2Q15031 903 aaKnown RBP20.04■□□□□ 0.8
USP6NL-204ENST00000606752 GPR68Q15743 365 aa20.04■□□□□ 0.8
USP6NL-204ENST00000606752 KDM4DQ6B0I6 523 aa20.04■□□□□ 0.8
USP6NL-204ENST00000606752 FIGNL1Q6PIW4 674 aa20.04■□□□□ 0.8
USP6NL-204ENST00000606752 DEF8Q6ZN54 512 aa20.04■□□□□ 0.8
USP6NL-204ENST00000606752 OR52J3Q8NH60 311 aa20.04■□□□□ 0.8
USP6NL-204ENST00000606752 GIPC3Q8TF64 312 aa20.04■□□□□ 0.8
USP6NL-204ENST00000606752 FBXL20Q96IG2 436 aa20.04■□□□□ 0.8
USP6NL-204ENST00000606752 TOR3AQ9H497 397 aa20.04■□□□□ 0.8
USP6NL-204ENST00000606752 FBXO34Q9NWN3 711 aa20.04■□□□□ 0.8
USP6NL-204ENST00000606752 DTX4Q9Y2E6 619 aa20.04■□□□□ 0.8
USP6NL-204ENST00000606752 CACNA1HO95180 2353 aa20.04■□□□□ 0.8
USP6NL-204ENST00000606752 A8MUA0 341 aa20.04■□□□□ 0.8
USP6NL-204ENST00000606752 BRINP1O60477 761 aa20.04■□□□□ 0.8
USP6NL-204ENST00000606752 SEMA7AO75326 666 aa20.04■□□□□ 0.8
USP6NL-204ENST00000606752 KCNK2O95069 426 aa20.04■□□□□ 0.8
USP6NL-204ENST00000606752 CLPSP04118 112 aa20.04■□□□□ 0.8
USP6NL-204ENST00000606752 THBS1P07996 1170 aa20.04■□□□□ 0.8
USP6NL-204ENST00000606752 GUSBP08236 651 aa20.04■□□□□ 0.8
USP6NL-204ENST00000606752 ZGLP1P0C6A0 271 aa20.04■□□□□ 0.8
USP6NL-204ENST00000606752 LIMS1P48059 325 aa20.04■□□□□ 0.8
USP6NL-204ENST00000606752 COLEC12Q5KU26 742 aa20.04■□□□□ 0.8
USP6NL-204ENST00000606752 ZNF385CQ66K41 422 aaPredicted RBP20.04■□□□□ 0.8
USP6NL-204ENST00000606752 FAHD1Q6P587 224 aa20.04■□□□□ 0.8
USP6NL-204ENST00000606752 NAXDQ8IW45 347 aa20.04■□□□□ 0.8
USP6NL-204ENST00000606752 RMND5BQ96G75 393 aaPredicted RBP20.04■□□□□ 0.8
USP6NL-204ENST00000606752 ARHGDIGQ99819 225 aa20.04■□□□□ 0.8
USP6NL-204ENST00000606752 CTRCQ99895 268 aa20.04■□□□□ 0.8
USP6NL-204ENST00000606752 KLHL28Q9NXS3 571 aa20.04■□□□□ 0.8
USP6NL-204ENST00000606752 ACAD8Q9UKU7 415 aa20.04■□□□□ 0.8
USP6NL-204ENST00000606752 ZNF443Q9Y2A4 671 aaPredicted RBP20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms