RNA–Protein interactions for RNA: ENST00000603837.1

LINC01109-201, Transcript of long intergenic non-protein coding RNA 1109, humanhuman

BASIC

Gene LINC01109, Length 3,081 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01109-201ENST00000603837 C11orf54Q9H0W9 315 aaPredicted RBP4.46□□□□□ -1.7
LINC01109-201ENST00000603837 KLHL31Q9H511 634 aa4.46□□□□□ -1.7
LINC01109-201ENST00000603837 GEMIN7Q9H840 131 aaKnown RBP4.46□□□□□ -1.7
LINC01109-201ENST00000603837 TMEM8AQ9HCN3 771 aa4.46□□□□□ -1.7
LINC01109-201ENST00000603837 SPAG4Q9NPE6 437 aa4.46□□□□□ -1.7
LINC01109-201ENST00000603837 DYRK4Q9NR20 520 aa4.46□□□□□ -1.7
LINC01109-201ENST00000603837 FAM49BQ9NUQ9 324 aa4.46□□□□□ -1.7
LINC01109-201ENST00000603837 POT1Q9NUX5 634 aa4.46□□□□□ -1.7
LINC01109-201ENST00000603837 BARHL2Q9NY43 387 aa4.46□□□□□ -1.7
LINC01109-201ENST00000603837 CLEC2DQ9UHP7 191 aa4.46□□□□□ -1.7
LINC01109-201ENST00000603837 FBXL2Q9UKC9 423 aa4.46□□□□□ -1.7
LINC01109-201ENST00000603837 MICAL3Q7RTP6 2002 aa4.46□□□□□ -1.7
LINC01109-201ENST00000603837 K7EQM0 130 aa4.46□□□□□ -1.7
LINC01109-201ENST00000603837 M0QZ92 97 aa4.46□□□□□ -1.7
LINC01109-201ENST00000603837 AGRPO00253 132 aa4.46□□□□□ -1.7
LINC01109-201ENST00000603837 HSPA12AO43301 675 aa4.46□□□□□ -1.7
LINC01109-201ENST00000603837 ECI2O75521 394 aa4.46□□□□□ -1.7
LINC01109-201ENST00000603837 SRP72O76094 671 aaKnown RBP4.46□□□□□ -1.7
LINC01109-201ENST00000603837 KDM4BO94953 1096 aa4.46□□□□□ -1.7
LINC01109-201ENST00000603837 FADS2O95864 444 aaKnown RBP4.46□□□□□ -1.7
LINC01109-201ENST00000603837 CFDP00746 253 aaPredicted RBP4.46□□□□□ -1.7
LINC01109-201ENST00000603837 FGF2P09038 288 aa4.46□□□□□ -1.7
LINC01109-201ENST00000603837 GIMD1P0DJR0 217 aa4.46□□□□□ -1.7
LINC01109-201ENST00000603837 SAGP10523 405 aaPredicted RBP4.46□□□□□ -1.7
LINC01109-201ENST00000603837 LBPP18428 481 aa4.46□□□□□ -1.7
LINC01109-201ENST00000603837 SRMP19623 302 aa4.46□□□□□ -1.7
LINC01109-201ENST00000603837 CCND3P30281 292 aaPredicted RBP4.46□□□□□ -1.7
LINC01109-201ENST00000603837 HOXA13P31271 388 aaPredicted RBP4.46□□□□□ -1.7
LINC01109-201ENST00000603837 TGFBR2P37173 567 aa4.46□□□□□ -1.7
LINC01109-201ENST00000603837 ALDH3B1P43353 468 aa4.46□□□□□ -1.7
LINC01109-201ENST00000603837 RBP2P50120 134 aa4.46□□□□□ -1.7
LINC01109-201ENST00000603837 CD47Q08722 323 aa4.46□□□□□ -1.7
LINC01109-201ENST00000603837 RUNX2Q13950 521 aa4.46□□□□□ -1.7
LINC01109-201ENST00000603837 TAF1AQ15573 450 aaPredicted RBP4.46□□□□□ -1.7
LINC01109-201ENST00000603837 MICBQ29980 383 aa4.46□□□□□ -1.7
LINC01109-201ENST00000603837 CTU2Q2VPK5 515 aaKnown RBP4.46□□□□□ -1.7
LINC01109-201ENST00000603837 KLHL22Q53GT1 634 aa4.46□□□□□ -1.7
LINC01109-201ENST00000603837 LBHQ53QV2 105 aaPredicted RBP4.46□□□□□ -1.7
LINC01109-201ENST00000603837 MARC1Q5VT66 337 aa4.46□□□□□ -1.7
LINC01109-201ENST00000603837 LINC00696Q6ZRV3 163 aa4.46□□□□□ -1.7
LINC01109-201ENST00000603837 CIR1Q86X95 450 aaPredicted RBP4.46□□□□□ -1.7
LINC01109-201ENST00000603837 PPIL6Q8IXY8 311 aa4.46□□□□□ -1.7
LINC01109-201ENST00000603837 LCORLQ8N3X6 602 aa4.46□□□□□ -1.7
LINC01109-201ENST00000603837 ARRDC1Q8N5I2 433 aa4.46□□□□□ -1.7
LINC01109-201ENST00000603837 ATPAF2Q8N5M1 289 aa4.46□□□□□ -1.7
LINC01109-201ENST00000603837 BVESQ8NE79 360 aa4.46□□□□□ -1.7
LINC01109-201ENST00000603837 ZNF555Q8NEP9 628 aa4.46□□□□□ -1.7
LINC01109-201ENST00000603837 MAPK15Q8TD08 544 aa4.46□□□□□ -1.7
LINC01109-201ENST00000603837 CYB5D2Q8WUJ1 264 aa4.46□□□□□ -1.7
LINC01109-201ENST00000603837 FOXRED1Q96CU9 486 aaPredicted RBP4.46□□□□□ -1.7
LINC01109-201ENST00000603837 BSCL2Q96G97 398 aaPredicted RBP4.46□□□□□ -1.7
LINC01109-201ENST00000603837 LRIG1Q96JA1 1093 aa4.46□□□□□ -1.7
LINC01109-201ENST00000603837 CXorf58Q96LI9 332 aa4.46□□□□□ -1.7
LINC01109-201ENST00000603837 ZNF607Q96SK3 696 aa4.46□□□□□ -1.7
LINC01109-201ENST00000603837 ACOX2Q99424 681 aa4.46□□□□□ -1.7
LINC01109-201ENST00000603837 KLHDC3Q9BQ90 382 aa4.46□□□□□ -1.7
LINC01109-201ENST00000603837 WDR83Q9BRX9 315 aaKnown RBP4.46□□□□□ -1.7
LINC01109-201ENST00000603837 PRDM12Q9H4Q4 367 aa4.46□□□□□ -1.7
LINC01109-201ENST00000603837 MRPS30Q9NP92 439 aaKnown RBP4.46□□□□□ -1.7
LINC01109-201ENST00000603837 CHST11Q9NPF2 352 aa4.46□□□□□ -1.7
LINC01109-201ENST00000603837 WASF3Q9UPY6 502 aa4.46□□□□□ -1.7
LINC01109-201ENST00000603837 KAT6AQ92794 2004 aa4.45□□□□□ -1.7
LINC01109-201ENST00000603837 LOC100289279A0A1B0GTE1 492 aa4.45□□□□□ -1.7
LINC01109-201ENST00000603837 ELOVL7A1L3X0 281 aa4.45□□□□□ -1.7
LINC01109-201ENST00000603837 SLC15A5A6NIM6 579 aa4.45□□□□□ -1.7
LINC01109-201ENST00000603837 ERI2A8K979 691 aaKnown RBP4.45□□□□□ -1.7
LINC01109-201ENST00000603837 KCNU1A8MYU2 1149 aa4.45□□□□□ -1.7
LINC01109-201ENST00000603837 AIPO00170 330 aa4.45□□□□□ -1.7
LINC01109-201ENST00000603837 GRID2O43424 1007 aa4.45□□□□□ -1.7
LINC01109-201ENST00000603837 DNPH1O43598 174 aa4.45□□□□□ -1.7
LINC01109-201ENST00000603837 LIASO43766 372 aa4.45□□□□□ -1.7
LINC01109-201ENST00000603837 LALBAP00709 142 aa4.45□□□□□ -1.7
LINC01109-201ENST00000603837 IFNA6P05013 189 aa4.45□□□□□ -1.7
LINC01109-201ENST00000603837 TSPAN8P19075 237 aa4.45□□□□□ -1.7
LINC01109-201ENST00000603837 UCP1P25874 307 aa4.45□□□□□ -1.7
LINC01109-201ENST00000603837 EPHA8P29322 1005 aaPredicted RBP4.45□□□□□ -1.7
LINC01109-201ENST00000603837 SSTR2P30874 369 aa4.45□□□□□ -1.7
LINC01109-201ENST00000603837 KIR2DL3P43628 341 aa4.45□□□□□ -1.7
LINC01109-201ENST00000603837 NR0B1P51843 470 aaKnown RBP4.45□□□□□ -1.7
LINC01109-201ENST00000603837 BCAT1P54687 386 aa4.45□□□□□ -1.7
LINC01109-201ENST00000603837 RPS7P62081 194 aaKnown RBP4.45□□□□□ -1.7
LINC01109-201ENST00000603837 NHLH1Q02575 133 aa4.45□□□□□ -1.7
LINC01109-201ENST00000603837 NFATC4Q14934 902 aa4.45□□□□□ -1.7
LINC01109-201ENST00000603837 SNAPC1Q16533 368 aa4.45□□□□□ -1.7
LINC01109-201ENST00000603837 KCNMB1Q16558 191 aa4.45□□□□□ -1.7
LINC01109-201ENST00000603837 SGCBQ16585 318 aa4.45□□□□□ -1.7
LINC01109-201ENST00000603837 NTRK2Q16620 822 aa4.45□□□□□ -1.7
LINC01109-201ENST00000603837 SLC35F1Q5T1Q4 408 aa4.45□□□□□ -1.7
LINC01109-201ENST00000603837 GCNT6Q5T4J0 391 aa4.45□□□□□ -1.7
LINC01109-201ENST00000603837 KIAA0930Q6ICG6 404 aaPredicted RBP4.45□□□□□ -1.7
LINC01109-201ENST00000603837 RGS7BPQ6MZT1 257 aaPredicted RBP4.45□□□□□ -1.7
LINC01109-201ENST00000603837 UQCC3Q6UW78 93 aa4.45□□□□□ -1.7
LINC01109-201ENST00000603837 CLEC9AQ6UXN8 241 aa4.45□□□□□ -1.7
LINC01109-201ENST00000603837 SERPINA13PQ6UXR4 307 aa4.45□□□□□ -1.7
LINC01109-201ENST00000603837 PIWIL4Q7Z3Z4 852 aaKnown RBP4.45□□□□□ -1.7
LINC01109-201ENST00000603837 GHDCQ8N2G8 530 aa4.45□□□□□ -1.7
LINC01109-201ENST00000603837 PLA2G15Q8NCC3 412 aa4.45□□□□□ -1.7
LINC01109-201ENST00000603837 OR9A2Q8NGT5 310 aa4.45□□□□□ -1.7
LINC01109-201ENST00000603837 ITFG1Q8TB96 612 aa4.45□□□□□ -1.7
LINC01109-201ENST00000603837 WDR20Q8TBZ3 569 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms