RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 SNRNP40Q96DI7 357 aaKnown RBP12.76□□□□□ -0.37
RNF40-212ENST00000602784 SPDL1Q96EA4 605 aa12.76□□□□□ -0.37
RNF40-212ENST00000602784 NEURL3Q96EH8 262 aa12.76□□□□□ -0.37
RNF40-212ENST00000602784 C16orf58Q96GQ5 468 aa12.76□□□□□ -0.37
RNF40-212ENST00000602784 COL21A1Q96P44 957 aa12.76□□□□□ -0.37
RNF40-212ENST00000602784 TAAR6Q96RI8 345 aa12.76□□□□□ -0.37
RNF40-212ENST00000602784 FAM173AQ9BQD7 235 aa12.76□□□□□ -0.37
RNF40-212ENST00000602784 INPP5KQ9BT40 448 aa12.76□□□□□ -0.37
RNF40-212ENST00000602784 EPN3Q9H201 632 aa12.76□□□□□ -0.37
RNF40-212ENST00000602784 PIGUQ9H490 435 aa12.76□□□□□ -0.37
RNF40-212ENST00000602784 AGPAT4Q9NRZ5 378 aa12.76□□□□□ -0.37
RNF40-212ENST00000602784 RNF103-CHMP3A0A140T963 221 aa12.75□□□□□ -0.37
RNF40-212ENST00000602784 A0A1W2PP18 115 aa12.75□□□□□ -0.37
RNF40-212ENST00000602784 SLC22A2O15244 555 aa12.75□□□□□ -0.37
RNF40-212ENST00000602784 SNX4O95219 450 aa12.75□□□□□ -0.37
RNF40-212ENST00000602784 KCNH1O95259 989 aa12.75□□□□□ -0.37
RNF40-212ENST00000602784 IL33O95760 270 aa12.75□□□□□ -0.37
RNF40-212ENST00000602784 CCL3P10147 92 aa12.75□□□□□ -0.37
RNF40-212ENST00000602784 ACP2P11117 423 aa12.75□□□□□ -0.37
RNF40-212ENST00000602784 IL12BP29460 328 aa12.75□□□□□ -0.37
RNF40-212ENST00000602784 LCN1P31025 176 aa12.75□□□□□ -0.37
RNF40-212ENST00000602784 DUSP5Q16690 384 aa12.75□□□□□ -0.37
RNF40-212ENST00000602784 SAXO2Q658L1 398 aa12.75□□□□□ -0.37
RNF40-212ENST00000602784 ZNF324BQ6AW86 544 aaPredicted RBP12.75□□□□□ -0.37
RNF40-212ENST00000602784 FAM180AQ6UWF9 173 aa12.75□□□□□ -0.37
RNF40-212ENST00000602784 GK5Q6ZS86 529 aa12.75□□□□□ -0.37
RNF40-212ENST00000602784 ZNF621Q6ZSS3 439 aa12.75□□□□□ -0.37
RNF40-212ENST00000602784 WDR53Q7Z5U6 358 aaPredicted RBP12.75□□□□□ -0.37
RNF40-212ENST00000602784 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.75□□□□□ -0.37
RNF40-212ENST00000602784 CPLX4Q7Z7G2 160 aa12.75□□□□□ -0.37
RNF40-212ENST00000602784 BCORP1Q8N888 145 aa12.75□□□□□ -0.37
RNF40-212ENST00000602784 ZFP62Q8NB50 900 aaPredicted RBP12.75□□□□□ -0.37
RNF40-212ENST00000602784 OR2M7Q8NG81 312 aa12.75□□□□□ -0.37
RNF40-212ENST00000602784 OR5M3Q8NGP4 307 aa12.75□□□□□ -0.37
RNF40-212ENST00000602784 OR5AK3PQ8NH89 298 aa12.75□□□□□ -0.37
RNF40-212ENST00000602784 CPT1CQ8TCG5 803 aa12.75□□□□□ -0.37
RNF40-212ENST00000602784 ADAMTS15Q8TE58 950 aa12.75□□□□□ -0.37
RNF40-212ENST00000602784 GRHL3Q8TE85 626 aa12.75□□□□□ -0.37
RNF40-212ENST00000602784 FAR1Q8WVX9 515 aa12.75□□□□□ -0.37
RNF40-212ENST00000602784 GTF2H4Q92759 462 aa12.75□□□□□ -0.37
RNF40-212ENST00000602784 TMCO6Q96DC7 493 aa12.75□□□□□ -0.37
RNF40-212ENST00000602784 FRMD6Q96NE9 622 aa12.75□□□□□ -0.37
RNF40-212ENST00000602784 ADOQ96SZ5 270 aa12.75□□□□□ -0.37
RNF40-212ENST00000602784 ELAC2Q9BQ52 826 aaKnown RBP12.75□□□□□ -0.37
RNF40-212ENST00000602784 SLC35A5Q9BS91 424 aa12.75□□□□□ -0.37
RNF40-212ENST00000602784 BTBD2Q9BX70 525 aa12.75□□□□□ -0.37
RNF40-212ENST00000602784 ANGPTL4Q9BY76 406 aa12.75□□□□□ -0.37
RNF40-212ENST00000602784 SAR1AQ9NR31 198 aa12.75□□□□□ -0.37
RNF40-212ENST00000602784 DEPPQ9NTK1 212 aa12.75□□□□□ -0.37
RNF40-212ENST00000602784 CNOT11Q9UKZ1 510 aaKnown RBP12.75□□□□□ -0.37
RNF40-212ENST00000602784 A0A096LPI6 279 aa12.74□□□□□ -0.37
RNF40-212ENST00000602784 NR5A2O00482 541 aa12.74□□□□□ -0.37
RNF40-212ENST00000602784 ASNA1O43681 348 aa12.74□□□□□ -0.37
RNF40-212ENST00000602784 SNX3O60493 162 aa12.74□□□□□ -0.37
RNF40-212ENST00000602784 UGT2B11O75310 529 aa12.74□□□□□ -0.37
RNF40-212ENST00000602784 KRT75O95678 551 aa12.74□□□□□ -0.37
RNF40-212ENST00000602784 AGR2O95994 175 aa12.74□□□□□ -0.37
RNF40-212ENST00000602784 CAPN3P20807 821 aa12.74□□□□□ -0.37
RNF40-212ENST00000602784 MATN1P21941 496 aa12.74□□□□□ -0.37
RNF40-212ENST00000602784 PTPN6P29350 595 aa12.74□□□□□ -0.37
RNF40-212ENST00000602784 CHI3L1P36222 383 aaPredicted RBP12.74□□□□□ -0.37
RNF40-212ENST00000602784 CASP3P42574 277 aa12.74□□□□□ -0.37
RNF40-212ENST00000602784 CDKN2CP42773 168 aa12.74□□□□□ -0.37
RNF40-212ENST00000602784 MLLT10P55197 1068 aa12.74□□□□□ -0.37
RNF40-212ENST00000602784 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.74□□□□□ -0.37
RNF40-212ENST00000602784 PRICKLE2Q7Z3G6 844 aa12.74□□□□□ -0.37
RNF40-212ENST00000602784 ZNF605Q86T29 641 aa12.74□□□□□ -0.37
RNF40-212ENST00000602784 COX18Q8N8Q8 333 aa12.74□□□□□ -0.37
RNF40-212ENST00000602784 RNF138Q8WVD3 245 aa12.74□□□□□ -0.37
RNF40-212ENST00000602784 PIK3R3Q92569 461 aa12.74□□□□□ -0.37
RNF40-212ENST00000602784 JADE3Q92613 823 aa12.74□□□□□ -0.37
RNF40-212ENST00000602784 YIPF4Q9BSR8 244 aa12.74□□□□□ -0.37
RNF40-212ENST00000602784 G6PC3Q9BUM1 346 aa12.74□□□□□ -0.37
RNF40-212ENST00000602784 PROK2Q9HC23 129 aa12.74□□□□□ -0.37
RNF40-212ENST00000602784 ASF1BQ9NVP2 202 aa12.74□□□□□ -0.37
RNF40-212ENST00000602784 NTNG1Q9Y2I2 539 aa12.74□□□□□ -0.37
RNF40-212ENST00000602784 RP1L1Q8IWN7 2480 aaPredicted RBP12.74□□□□□ -0.37
RNF40-212ENST00000602784 EXPH5Q8NEV8 1989 aa12.74□□□□□ -0.37
RNF40-212ENST00000602784 GXYLT2A0PJZ3 443 aa12.73□□□□□ -0.37
RNF40-212ENST00000602784 SLC28A2O43868 658 aa12.73□□□□□ -0.37
RNF40-212ENST00000602784 HS6ST1O60243 411 aa12.73□□□□□ -0.37
RNF40-212ENST00000602784 CCDC22O60826 627 aa12.73□□□□□ -0.37
RNF40-212ENST00000602784 KCNK2O95069 426 aa12.73□□□□□ -0.37
RNF40-212ENST00000602784 AK1P00568 194 aa12.73□□□□□ -0.37
RNF40-212ENST00000602784 SNRPB2P08579 225 aaKnown RBP12.73□□□□□ -0.37
RNF40-212ENST00000602784 MEOX1P50221 254 aa12.73□□□□□ -0.37
RNF40-212ENST00000602784 ANXA11P50995 505 aaKnown RBP12.73□□□□□ -0.37
RNF40-212ENST00000602784 POU6F2P78424 691 aaPredicted RBP12.73□□□□□ -0.37
RNF40-212ENST00000602784 TLE1Q04724 770 aa12.73□□□□□ -0.37
RNF40-212ENST00000602784 FOXO1Q12778 655 aa12.73□□□□□ -0.37
RNF40-212ENST00000602784 HYAL4Q2M3T9 481 aa12.73□□□□□ -0.37
RNF40-212ENST00000602784 PRR30Q53SZ7 412 aaPredicted RBP12.73□□□□□ -0.37
RNF40-212ENST00000602784 C6orf10Q5SRN2 563 aa12.73□□□□□ -0.37
RNF40-212ENST00000602784 LRIF1Q5T3J3 769 aa12.73□□□□□ -0.37
RNF40-212ENST00000602784 AP1ARQ63HQ0 302 aa12.73□□□□□ -0.37
RNF40-212ENST00000602784 SLC30A6Q6NXT4 461 aa12.73□□□□□ -0.37
RNF40-212ENST00000602784 BNC2Q6ZN30 1099 aaPredicted RBP12.73□□□□□ -0.37
RNF40-212ENST00000602784 CLEC4FQ8N1N0 589 aa12.73□□□□□ -0.37
RNF40-212ENST00000602784 DPP10Q8N608 796 aa12.73□□□□□ -0.37
RNF40-212ENST00000602784 ZFP90Q8TF47 636 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms