RNA–Protein interactions for RNA: ENST00000602660.1

SFXN2-208, Transcript of sideroflexin 2, humanhuman

TSL 2

Gene SFXN2, Length 667 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN2-208ENST00000602660 CSMD1Q96PZ7 3565 aa14.56□□□□□ -0.08
SFXN2-208ENST00000602660 PRR14LQ5THK1 2151 aa14.56□□□□□ -0.08
SFXN2-208ENST00000602660 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.56□□□□□ -0.08
SFXN2-208ENST00000602660 WDR91A4D1P6 747 aa14.56□□□□□ -0.08
SFXN2-208ENST00000602660 C17orf51A8MQB3 221 aa14.56□□□□□ -0.08
SFXN2-208ENST00000602660 TM9SF1O15321 606 aa14.56□□□□□ -0.08
SFXN2-208ENST00000602660 BIRC5O15392 142 aa14.56□□□□□ -0.08
SFXN2-208ENST00000602660 PEX11AO75192 247 aa14.56□□□□□ -0.08
SFXN2-208ENST00000602660 COQ9O75208 318 aa14.56□□□□□ -0.08
SFXN2-208ENST00000602660 REM1O75628 298 aa14.56□□□□□ -0.08
SFXN2-208ENST00000602660 KIR3DL1P43629 444 aa14.56□□□□□ -0.08
SFXN2-208ENST00000602660 PMPCAQ10713 525 aa14.56□□□□□ -0.08
SFXN2-208ENST00000602660 ZNF155Q12901 538 aaPredicted RBP14.56□□□□□ -0.08
SFXN2-208ENST00000602660 HSPB3Q12988 150 aa14.56□□□□□ -0.08
SFXN2-208ENST00000602660 CHI3L2Q15782 390 aa14.56□□□□□ -0.08
SFXN2-208ENST00000602660 TMEM211Q6ICI0 200 aa14.56□□□□□ -0.08
SFXN2-208ENST00000602660 ZNF585AQ6P3V2 769 aa14.56□□□□□ -0.08
SFXN2-208ENST00000602660 HOMEZQ8IX15 550 aa14.56□□□□□ -0.08
SFXN2-208ENST00000602660 NUDT8Q8WV74 236 aa14.56□□□□□ -0.08
SFXN2-208ENST00000602660 MARVELD3Q96A59 401 aa14.56□□□□□ -0.08
SFXN2-208ENST00000602660 EFHD2Q96C19 240 aaPredicted RBP14.56□□□□□ -0.08
SFXN2-208ENST00000602660 PPCDCQ96CD2 204 aa14.56□□□□□ -0.08
SFXN2-208ENST00000602660 GIMAP5Q96F15 307 aa14.56□□□□□ -0.08
SFXN2-208ENST00000602660 PPP3R2Q96LZ3 170 aa14.56□□□□□ -0.08
SFXN2-208ENST00000602660 TTYH2Q9BSA4 534 aa14.56□□□□□ -0.08
SFXN2-208ENST00000602660 LMF2Q9BU23 707 aaKnown RBP14.56□□□□□ -0.08
SFXN2-208ENST00000602660 NTMQ9P121 344 aa14.56□□□□□ -0.08
SFXN2-208ENST00000602660 ACAD8Q9UKU7 415 aa14.56□□□□□ -0.08
SFXN2-208ENST00000602660 PDZD2O15018 2839 aa14.56□□□□□ -0.08
SFXN2-208ENST00000602660 CSMD2Q7Z408 3487 aa14.55□□□□□ -0.08
SFXN2-208ENST00000602660 UQCRHLA0A096LP55 91 aa14.55□□□□□ -0.08
SFXN2-208ENST00000602660 FIGNL2A6NMB9 653 aa14.55□□□□□ -0.08
SFXN2-208ENST00000602660 KDM4EB2RXH2 506 aaPredicted RBP14.55□□□□□ -0.08
SFXN2-208ENST00000602660 HNRNPRO43390 633 aaKnown RBP14.55□□□□□ -0.08
SFXN2-208ENST00000602660 ABCB7O75027 752 aa14.55□□□□□ -0.08
SFXN2-208ENST00000602660 WDR1O75083 606 aa14.55□□□□□ -0.08
SFXN2-208ENST00000602660 SERPINE1P05121 402 aa14.55□□□□□ -0.08
SFXN2-208ENST00000602660 GLI4P10075 376 aa14.55□□□□□ -0.08
SFXN2-208ENST00000602660 CYP4B1P13584 511 aa14.55□□□□□ -0.08
SFXN2-208ENST00000602660 EFNA1P20827 205 aaPredicted RBP14.55□□□□□ -0.08
SFXN2-208ENST00000602660 ELAVL4P26378 380 aaKnown RBP14.55□□□□□ -0.08
SFXN2-208ENST00000602660 ASMTP46597 345 aa14.55□□□□□ -0.08
SFXN2-208ENST00000602660 PNLIPRP2P54317 469 aa14.55□□□□□ -0.08
SFXN2-208ENST00000602660 ABCE1P61221 599 aaKnown RBP14.55□□□□□ -0.08
SFXN2-208ENST00000602660 PSPHP78330 225 aa14.55□□□□□ -0.08
SFXN2-208ENST00000602660 GAB1Q13480 694 aa14.55□□□□□ -0.08
SFXN2-208ENST00000602660 PTGR1Q14914 329 aa14.55□□□□□ -0.08
SFXN2-208ENST00000602660 EIPR1Q53HC9 387 aa14.55□□□□□ -0.08
SFXN2-208ENST00000602660 EXOSC6Q5RKV6 272 aaKnown RBP14.55□□□□□ -0.08
SFXN2-208ENST00000602660 DCST1Q5T197 706 aa14.55□□□□□ -0.08
SFXN2-208ENST00000602660 VASNQ6EMK4 673 aa14.55□□□□□ -0.08
SFXN2-208ENST00000602660 SEM1Q6ZVN7 128 aa14.55□□□□□ -0.08
SFXN2-208ENST00000602660 LARP4Q71RC2 724 aaKnown RBP eCLIP14.55□□□□□ -0.08
SFXN2-208ENST00000602660 CCDC71Q8IV32 467 aaPredicted RBP14.55□□□□□ -0.08
SFXN2-208ENST00000602660 LIX1Q8N485 282 aa14.55□□□□□ -0.08
SFXN2-208ENST00000602660 ZNF781Q8N8C0 355 aa14.55□□□□□ -0.08
SFXN2-208ENST00000602660 OR1J4Q8NGS1 313 aa14.55□□□□□ -0.08
SFXN2-208ENST00000602660 RND1Q92730 232 aa14.55□□□□□ -0.08
SFXN2-208ENST00000602660 MTERF3Q96E29 417 aa14.55□□□□□ -0.08
SFXN2-208ENST00000602660 C1orf50Q9BV19 199 aa14.55□□□□□ -0.08
SFXN2-208ENST00000602660 EXO5Q9H790 373 aa14.55□□□□□ -0.08
SFXN2-208ENST00000602660 SERHLQ9NQF3 203 aa14.55□□□□□ -0.08
SFXN2-208ENST00000602660 SIRT3Q9NTG7 399 aaPredicted RBP14.55□□□□□ -0.08
SFXN2-208ENST00000602660 ACSS1Q9NUB1 689 aaPredicted RBP14.55□□□□□ -0.08
SFXN2-208ENST00000602660 DDX18Q9NVP1 670 aaKnown RBP14.55□□□□□ -0.08
SFXN2-208ENST00000602660 KLRF1Q9NZS2 232 aa14.55□□□□□ -0.08
SFXN2-208ENST00000602660 FLRT3Q9NZU0 649 aa14.55□□□□□ -0.08
SFXN2-208ENST00000602660 SH3BP4Q9P0V3 963 aa14.55□□□□□ -0.08
SFXN2-208ENST00000602660 ATP6V1HQ9UI12 483 aa14.55□□□□□ -0.08
SFXN2-208ENST00000602660 HAO1Q9UJM8 370 aa14.55□□□□□ -0.08
SFXN2-208ENST00000602660 SLC6A5Q9Y345 797 aa14.55□□□□□ -0.08
SFXN2-208ENST00000602660 PCDHGB3Q9Y5G1 929 aa14.55□□□□□ -0.08
SFXN2-208ENST00000602660 WIF1Q9Y5W5 379 aa14.55□□□□□ -0.08
SFXN2-208ENST00000602660 CCDC168Q8NDH2 2452 aa14.54□□□□□ -0.08
SFXN2-208ENST00000602660 TACC2O95359 2948 aa14.54□□□□□ -0.08
SFXN2-208ENST00000602660 TMEM114B3SHH9 223 aa14.54□□□□□ -0.08
SFXN2-208ENST00000602660 SCAMP2O15127 329 aaKnown RBP14.54□□□□□ -0.08
SFXN2-208ENST00000602660 TRAPPC6AO75865 159 aa14.54□□□□□ -0.08
SFXN2-208ENST00000602660 ADH7P40394 386 aa14.54□□□□□ -0.08
SFXN2-208ENST00000602660 WDR4P57081 412 aaKnown RBP14.54□□□□□ -0.08
SFXN2-208ENST00000602660 TFF3Q07654 80 aa14.54□□□□□ -0.08
SFXN2-208ENST00000602660 EFR3AQ14156 821 aa14.54□□□□□ -0.08
SFXN2-208ENST00000602660 CYP27C1Q4G0S4 372 aa14.54□□□□□ -0.08
SFXN2-208ENST00000602660 ATP6AP1LQ52LC2 224 aa14.54□□□□□ -0.08
SFXN2-208ENST00000602660 NHSL2Q5HYW2 709 aa14.54□□□□□ -0.08
SFXN2-208ENST00000602660 WIPI1Q5MNZ9 446 aaPredicted RBP14.54□□□□□ -0.08
SFXN2-208ENST00000602660 C1orf185Q5T7R7 199 aa14.54□□□□□ -0.08
SFXN2-208ENST00000602660 WLSQ5T9L3 541 aa14.54□□□□□ -0.08
SFXN2-208ENST00000602660 B3GNT6Q6ZMB0 384 aa14.54□□□□□ -0.08
SFXN2-208ENST00000602660 HDXQ7Z353 690 aa14.54□□□□□ -0.08
SFXN2-208ENST00000602660 RIMKLAQ8IXN7 391 aa14.54□□□□□ -0.08
SFXN2-208ENST00000602660 ULK2Q8IYT8 1036 aa14.54□□□□□ -0.08
SFXN2-208ENST00000602660 FAM83FQ8NEG4 500 aaPredicted RBP14.54□□□□□ -0.08
SFXN2-208ENST00000602660 OR7A2PQ8NGA2 310 aa14.54□□□□□ -0.08
SFXN2-208ENST00000602660 LILRB4Q8NHJ6 448 aa14.54□□□□□ -0.08
SFXN2-208ENST00000602660 TMCO6Q96DC7 493 aa14.54□□□□□ -0.08
SFXN2-208ENST00000602660 ZBED6CLQ96FA7 236 aaPredicted RBP14.54□□□□□ -0.08
SFXN2-208ENST00000602660 TIMP4Q99727 224 aa14.54□□□□□ -0.08
SFXN2-208ENST00000602660 RTN4RQ9BZR6 473 aa14.54□□□□□ -0.08
SFXN2-208ENST00000602660 OR2B2Q9GZK3 357 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms