RNA–Protein interactions for RNA: ENST00000601150.5

TRIM28-215, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 915 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-215ENST00000601150 PTGS2P35354 604 aa15.43■□□□□ 0.06
TRIM28-215ENST00000601150 CLNS1AP54105 237 aaKnown RBP15.43■□□□□ 0.06
TRIM28-215ENST00000601150 GAB1Q13480 694 aa15.43■□□□□ 0.06
TRIM28-215ENST00000601150 SLC10A1Q14973 349 aa15.43■□□□□ 0.06
TRIM28-215ENST00000601150 DECR1Q16698 335 aa15.43■□□□□ 0.06
TRIM28-215ENST00000601150 NXNQ6DKJ4 435 aa15.43■□□□□ 0.06
TRIM28-215ENST00000601150 ARHGAP11AQ6P4F7 1023 aa15.43■□□□□ 0.06
TRIM28-215ENST00000601150 ZCCHC12Q6PEW1 402 aa15.43■□□□□ 0.06
TRIM28-215ENST00000601150 FJX1Q86VR8 437 aa15.43■□□□□ 0.06
TRIM28-215ENST00000601150 PSMA8Q8TAA3 256 aa15.43■□□□□ 0.06
TRIM28-215ENST00000601150 HOXB13Q92826 284 aaPredicted RBP15.43■□□□□ 0.06
TRIM28-215ENST00000601150 TESCQ96BS2 214 aa15.43■□□□□ 0.06
TRIM28-215ENST00000601150 EFHD2Q96C19 240 aaPredicted RBP15.43■□□□□ 0.06
TRIM28-215ENST00000601150 FAM120BQ96EK7 910 aaKnown RBP15.43■□□□□ 0.06
TRIM28-215ENST00000601150 GIMAP5Q96F15 307 aa15.43■□□□□ 0.06
TRIM28-215ENST00000601150 TMEM41AQ96HV5 264 aa15.43■□□□□ 0.06
TRIM28-215ENST00000601150 MAELQ96JY0 434 aaKnown RBP15.43■□□□□ 0.06
TRIM28-215ENST00000601150 OSBPL11Q9BXB4 747 aa15.43■□□□□ 0.06
TRIM28-215ENST00000601150 NEUROD4Q9HD90 331 aa15.43■□□□□ 0.06
TRIM28-215ENST00000601150 ZCCHC3Q9NUD5 404 aaKnown RBP15.43■□□□□ 0.06
TRIM28-215ENST00000601150 AIG1Q9NVV5 245 aa15.43■□□□□ 0.06
TRIM28-215ENST00000601150 ZNF446Q9NWS9 450 aa15.43■□□□□ 0.06
TRIM28-215ENST00000601150 QPCTLQ9NXS2 382 aa15.43■□□□□ 0.06
TRIM28-215ENST00000601150 KLRF1Q9NZS2 232 aa15.43■□□□□ 0.06
TRIM28-215ENST00000601150 SH3BGRL2Q9UJC5 107 aa15.43■□□□□ 0.06
TRIM28-215ENST00000601150 SNX8Q9Y5X2 465 aa15.43■□□□□ 0.06
TRIM28-215ENST00000601150 DOPEY2Q9Y3R5 2298 aa15.43■□□□□ 0.06
TRIM28-215ENST00000601150 DNAJC13O75165 2243 aa15.43■□□□□ 0.06
TRIM28-215ENST00000601150 WIPF3A6NGB9 483 aa15.42■□□□□ 0.06
TRIM28-215ENST00000601150 CCL21O00585 134 aa15.42■□□□□ 0.06
TRIM28-215ENST00000601150 PRRG2O14669 202 aa15.42■□□□□ 0.06
TRIM28-215ENST00000601150 CFLARO15519 480 aa15.42■□□□□ 0.06
TRIM28-215ENST00000601150 ZNHIT1O43257 154 aa15.42■□□□□ 0.06
TRIM28-215ENST00000601150 ICOSLGO75144 302 aa15.42■□□□□ 0.06
TRIM28-215ENST00000601150 NKX2-2O95096 273 aa15.42■□□□□ 0.06
TRIM28-215ENST00000601150 IGHG3P01860 377 aa15.42■□□□□ 0.06
TRIM28-215ENST00000601150 CELA3AP09093 270 aa15.42■□□□□ 0.06
TRIM28-215ENST00000601150 GDF1P27539 372 aa15.42■□□□□ 0.06
TRIM28-215ENST00000601150 MAP3K8P41279 467 aa15.42■□□□□ 0.06
TRIM28-215ENST00000601150 KIR3DL1P43629 444 aa15.42■□□□□ 0.06
TRIM28-215ENST00000601150 PRIM2P49643 509 aa15.42■□□□□ 0.06
TRIM28-215ENST00000601150 C3AR1Q16581 482 aa15.42■□□□□ 0.06
TRIM28-215ENST00000601150 DPY19L1Q2PZI1 675 aa15.42■□□□□ 0.06
TRIM28-215ENST00000601150 SPDYE7PQ495Y7 208 aa15.42■□□□□ 0.06
TRIM28-215ENST00000601150 SLC9B1Q4ZJI4 515 aa15.42■□□□□ 0.06
TRIM28-215ENST00000601150 OR4F3Q6IEY1 312 aa15.42■□□□□ 0.06
TRIM28-215ENST00000601150 MFSD12Q6NUT3 480 aa15.42■□□□□ 0.06
TRIM28-215ENST00000601150 ANGPTL8Q6UXH0 198 aa15.42■□□□□ 0.06
TRIM28-215ENST00000601150 TRILQ7L0X0 811 aa15.42■□□□□ 0.06
TRIM28-215ENST00000601150 MAVSQ7Z434 540 aa15.42■□□□□ 0.06
TRIM28-215ENST00000601150 OR8J2Q8NGG1 315 aa15.42■□□□□ 0.06
TRIM28-215ENST00000601150 GPR151Q8TDV0 419 aa15.42■□□□□ 0.06
TRIM28-215ENST00000601150 ACTRT2Q8TDY3 377 aa15.42■□□□□ 0.06
TRIM28-215ENST00000601150 SLC9A6Q92581 669 aa15.42■□□□□ 0.06
TRIM28-215ENST00000601150 MOAP1Q96BY2 351 aa15.42■□□□□ 0.06
TRIM28-215ENST00000601150 LDAHQ9H6V9 325 aa15.42■□□□□ 0.06
TRIM28-215ENST00000601150 CXorf36Q9H7Y0 433 aa15.42■□□□□ 0.06
TRIM28-215ENST00000601150 SLCO1B3Q9NPD5 702 aa15.42■□□□□ 0.06
TRIM28-215ENST00000601150 TINAGQ9UJW2 476 aa15.42■□□□□ 0.06
TRIM28-215ENST00000601150 LIPGQ9Y5X9 500 aa15.42■□□□□ 0.06
TRIM28-215ENST00000601150 USH1CQ9Y6N9 552 aa15.42■□□□□ 0.06
TRIM28-215ENST00000601150 DIDO1Q9BTC0 2240 aaKnown RBP15.41■□□□□ 0.06
TRIM28-215ENST00000601150 A0A1B0GVC2 190 aa15.41■□□□□ 0.06
TRIM28-215ENST00000601150 RNASET2O00584 256 aaKnown RBP15.41■□□□□ 0.06
TRIM28-215ENST00000601150 ZNF195O14628 629 aa15.41■□□□□ 0.06
TRIM28-215ENST00000601150 SUSD5O60279 629 aa15.41■□□□□ 0.06
TRIM28-215ENST00000601150 HCN1O60741 890 aa15.41■□□□□ 0.06
TRIM28-215ENST00000601150 KCNH1O95259 989 aa15.41■□□□□ 0.06
TRIM28-215ENST00000601150 IL33O95760 270 aa15.41■□□□□ 0.06
TRIM28-215ENST00000601150 ALOX5P09917 674 aa15.41■□□□□ 0.06
TRIM28-215ENST00000601150 RNF224P0DH78 156 aa15.41■□□□□ 0.06
TRIM28-215ENST00000601150 ACP2P11117 423 aa15.41■□□□□ 0.06
TRIM28-215ENST00000601150 CYP4B1P13584 511 aa15.41■□□□□ 0.06
TRIM28-215ENST00000601150 ELAVL4P26378 380 aaKnown RBP15.41■□□□□ 0.06
TRIM28-215ENST00000601150 PTGDSP41222 190 aa15.41■□□□□ 0.06
TRIM28-215ENST00000601150 CCT3P49368 545 aaKnown RBP15.41■□□□□ 0.06
TRIM28-215ENST00000601150 PSMD4P55036 377 aaKnown RBP15.41■□□□□ 0.06
TRIM28-215ENST00000601150 WNT3P56703 355 aa15.41■□□□□ 0.06
TRIM28-215ENST00000601150 HBA1P69905 142 aa15.41■□□□□ 0.06
TRIM28-215ENST00000601150 FNDC7Q5VTL7 733 aa15.41■□□□□ 0.06
TRIM28-215ENST00000601150 TIGD3Q6B0B8 471 aa15.41■□□□□ 0.06
TRIM28-215ENST00000601150 VPS37AQ8NEZ2 397 aa15.41■□□□□ 0.06
TRIM28-215ENST00000601150 OR56A1Q8NGH5 318 aa15.41■□□□□ 0.06
TRIM28-215ENST00000601150 OR1J4Q8NGS1 313 aa15.41■□□□□ 0.06
TRIM28-215ENST00000601150 FAM57AQ8TBR7 257 aa15.41■□□□□ 0.06
TRIM28-215ENST00000601150 SFXN5Q8TD22 340 aa15.41■□□□□ 0.06
TRIM28-215ENST00000601150 EXO5Q9H790 373 aa15.41■□□□□ 0.06
TRIM28-215ENST00000601150 GALNT9Q9HCQ5 603 aa15.41■□□□□ 0.06
TRIM28-215ENST00000601150 ACKR4Q9NPB9 350 aa15.41■□□□□ 0.06
TRIM28-215ENST00000601150 SUCOQ9UBS9 1254 aaKnown RBP15.41■□□□□ 0.06
TRIM28-215ENST00000601150 C15orf41Q9Y2V0 281 aa15.41■□□□□ 0.06
TRIM28-215ENST00000601150 GPR45Q9Y5Y3 372 aa15.41■□□□□ 0.06
TRIM28-215ENST00000601150 MYO7BQ6PIF6 2116 aa15.41■□□□□ 0.06
TRIM28-215ENST00000601150 TRGV5A0A0B4J1U4 118 aa15.4■□□□□ 0.06
TRIM28-215ENST00000601150 GXYLT2A0PJZ3 443 aa15.4■□□□□ 0.06
TRIM28-215ENST00000601150 C2orf72A6NCS6 295 aa15.4■□□□□ 0.06
TRIM28-215ENST00000601150 OR14I1A6ND48 311 aa15.4■□□□□ 0.06
TRIM28-215ENST00000601150 E9PBE3 544 aa15.4■□□□□ 0.06
TRIM28-215ENST00000601150 AQP7O14520 342 aa15.4■□□□□ 0.06
TRIM28-215ENST00000601150 GNB5O14775 395 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms