RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 CATSPER1Q8NEC5 780 aa18.44■□□□□ 0.54
SHKBP1-222ENST00000600320 NSL1Q96IY1 281 aa18.44■□□□□ 0.54
SHKBP1-222ENST00000600320 GPATCH1Q9BRR8 931 aaKnown RBP18.44■□□□□ 0.54
SHKBP1-222ENST00000600320 RNF32Q9H0A6 362 aa18.44■□□□□ 0.54
SHKBP1-222ENST00000600320 NANOGQ9H9S0 305 aa18.44■□□□□ 0.54
SHKBP1-222ENST00000600320 FBXO34Q9NWN3 711 aa18.44■□□□□ 0.54
SHKBP1-222ENST00000600320 GID8Q9NWU2 228 aa18.44■□□□□ 0.54
SHKBP1-222ENST00000600320 PKD1L2Q7Z442 2459 aa18.44■□□□□ 0.54
SHKBP1-222ENST00000600320 FAM208BQ5VWN6 2430 aa18.43■□□□□ 0.54
SHKBP1-222ENST00000600320 OR5H15A6NDH6 313 aa18.43■□□□□ 0.54
SHKBP1-222ENST00000600320 KCNK2O95069 426 aa18.43■□□□□ 0.54
SHKBP1-222ENST00000600320 NPPAP01160 153 aa18.43■□□□□ 0.54
SHKBP1-222ENST00000600320 GPX2P18283 190 aa18.43■□□□□ 0.54
SHKBP1-222ENST00000600320 PPIBP23284 216 aaKnown RBP18.43■□□□□ 0.54
SHKBP1-222ENST00000600320 PIGAP37287 484 aa18.43■□□□□ 0.54
SHKBP1-222ENST00000600320 CRATP43155 626 aa18.43■□□□□ 0.54
SHKBP1-222ENST00000600320 NRG3P56975 720 aa18.43■□□□□ 0.54
SHKBP1-222ENST00000600320 FBXW4P57775 412 aa18.43■□□□□ 0.54
SHKBP1-222ENST00000600320 OC90Q02509 493 aaPredicted RBP18.43■□□□□ 0.54
SHKBP1-222ENST00000600320 ART3Q13508 389 aa18.43■□□□□ 0.54
SHKBP1-222ENST00000600320 RABL3Q5HYI8 236 aa18.43■□□□□ 0.54
SHKBP1-222ENST00000600320 C8orf82Q6P1X6 216 aaPredicted RBP18.43■□□□□ 0.54
SHKBP1-222ENST00000600320 FIGNL1Q6PIW4 674 aa18.43■□□□□ 0.54
SHKBP1-222ENST00000600320 OPN5Q6U736 354 aa18.43■□□□□ 0.54
SHKBP1-222ENST00000600320 HACD2Q6Y1H2 254 aa18.43■□□□□ 0.54
SHKBP1-222ENST00000600320 ZAR1Q86SH2 424 aa18.43■□□□□ 0.54
SHKBP1-222ENST00000600320 GALNT10Q86SR1 603 aa18.43■□□□□ 0.54
SHKBP1-222ENST00000600320 FAM110BQ8TC76 370 aa18.43■□□□□ 0.54
SHKBP1-222ENST00000600320 XAGE5Q8WWM1 108 aa18.43■□□□□ 0.54
SHKBP1-222ENST00000600320 HAS2Q92819 552 aa18.43■□□□□ 0.54
SHKBP1-222ENST00000600320 EFHD2Q96C19 240 aaPredicted RBP18.43■□□□□ 0.54
SHKBP1-222ENST00000600320 ROPN1LQ96C74 230 aa18.43■□□□□ 0.54
SHKBP1-222ENST00000600320 SPACA9Q96E40 222 aaPredicted RBP18.43■□□□□ 0.54
SHKBP1-222ENST00000600320 SIGLEC12Q96PQ1 595 aa18.43■□□□□ 0.54
SHKBP1-222ENST00000600320 UTP23Q9BRU9 249 aaKnown RBP18.43■□□□□ 0.54
SHKBP1-222ENST00000600320 BTBD2Q9BX70 525 aa18.43■□□□□ 0.54
SHKBP1-222ENST00000600320 ADNPQ9H2P0 1102 aa18.43■□□□□ 0.54
SHKBP1-222ENST00000600320 TRIM45Q9H8W5 580 aaPredicted RBP18.43■□□□□ 0.54
SHKBP1-222ENST00000600320 ZNF71Q9NQZ8 489 aaPredicted RBP18.43■□□□□ 0.54
SHKBP1-222ENST00000600320 ZNF451Q9Y4E5 1061 aa18.43■□□□□ 0.54
SHKBP1-222ENST00000600320 EXPH5Q8NEV8 1989 aa18.42■□□□□ 0.54
SHKBP1-222ENST00000600320 LAMA5O15230 3695 aa18.42■□□□□ 0.54
SHKBP1-222ENST00000600320 ASNA1O43681 348 aa18.42■□□□□ 0.54
SHKBP1-222ENST00000600320 UGT2B11O75310 529 aa18.42■□□□□ 0.54
SHKBP1-222ENST00000600320 REM1O75628 298 aa18.42■□□□□ 0.54
SHKBP1-222ENST00000600320 PPM1BO75688 479 aa18.42■□□□□ 0.54
SHKBP1-222ENST00000600320 ESRRAP11474 423 aaPredicted RBP18.42■□□□□ 0.54
SHKBP1-222ENST00000600320 SLC6A2P23975 617 aa18.42■□□□□ 0.54
SHKBP1-222ENST00000600320 RFX3P48380 749 aa18.42■□□□□ 0.54
SHKBP1-222ENST00000600320 DSTNP60981 165 aa18.42■□□□□ 0.54
SHKBP1-222ENST00000600320 POU6F2P78424 691 aaPredicted RBP18.42■□□□□ 0.54
SHKBP1-222ENST00000600320 ARG2P78540 354 aa18.42■□□□□ 0.54
SHKBP1-222ENST00000600320 MAPK11Q15759 364 aa18.42■□□□□ 0.54
SHKBP1-222ENST00000600320 SPINK14Q6IE38 97 aa18.42■□□□□ 0.54
SHKBP1-222ENST00000600320 HEPHL1Q6MZM0 1159 aa18.42■□□□□ 0.54
SHKBP1-222ENST00000600320 C6orf89Q6UWU4 347 aa18.42■□□□□ 0.54
SHKBP1-222ENST00000600320 OR5M3Q8NGP4 307 aa18.42■□□□□ 0.54
SHKBP1-222ENST00000600320 C9orf43Q8TAL5 461 aaPredicted RBP18.42■□□□□ 0.54
SHKBP1-222ENST00000600320 HGDQ93099 445 aa18.42■□□□□ 0.54
SHKBP1-222ENST00000600320 RAD21L1Q9H4I0 556 aa18.42■□□□□ 0.54
SHKBP1-222ENST00000600320 HPF1Q9NWY4 346 aa18.42■□□□□ 0.54
SHKBP1-222ENST00000600320 FLRT3Q9NZU0 649 aa18.42■□□□□ 0.54
SHKBP1-222ENST00000600320 LRFN1Q9P244 771 aa18.42■□□□□ 0.54
SHKBP1-222ENST00000600320 TUBD1Q9UJT1 453 aa18.42■□□□□ 0.54
SHKBP1-222ENST00000600320 PCDHGB7Q9Y5F8 929 aa18.42■□□□□ 0.54
SHKBP1-222ENST00000600320 DUXAA6NLW8 204 aa18.41■□□□□ 0.54
SHKBP1-222ENST00000600320 EVPLLA8MZ36 301 aa18.41■□□□□ 0.54
SHKBP1-222ENST00000600320 TNFRSF21O75509 655 aa18.41■□□□□ 0.54
SHKBP1-222ENST00000600320 NEURL1O76050 574 aa18.41■□□□□ 0.54
SHKBP1-222ENST00000600320 ZIC2O95409 532 aaPredicted RBP18.41■□□□□ 0.54
SHKBP1-222ENST00000600320 IL33O95760 270 aa18.41■□□□□ 0.54
SHKBP1-222ENST00000600320 BMP2P12643 396 aa18.41■□□□□ 0.54
SHKBP1-222ENST00000600320 NAGAP17050 411 aa18.41■□□□□ 0.54
SHKBP1-222ENST00000600320 CASRP41180 1078 aa18.41■□□□□ 0.54
SHKBP1-222ENST00000600320 MAGEA8P43361 318 aa18.41■□□□□ 0.54
SHKBP1-222ENST00000600320 CYB561P49447 251 aa18.41■□□□□ 0.54
SHKBP1-222ENST00000600320 OR1C1Q15619 314 aa18.41■□□□□ 0.54
SHKBP1-222ENST00000600320 NTRK2Q16620 822 aa18.41■□□□□ 0.54
SHKBP1-222ENST00000600320 DCST2Q5T1A1 773 aa18.41■□□□□ 0.54
SHKBP1-222ENST00000600320 IGFL3Q6UXB1 125 aa18.41■□□□□ 0.54
SHKBP1-222ENST00000600320 GPALPP1Q8IXQ4 340 aa18.41■□□□□ 0.54
SHKBP1-222ENST00000600320 CYP4Z2PQ8N1L4 340 aa18.41■□□□□ 0.54
SHKBP1-222ENST00000600320 RBMXL3Q8N7X1 1067 aaKnown RBP18.41■□□□□ 0.54
SHKBP1-222ENST00000600320 ANKFN1Q8N957 763 aa18.41■□□□□ 0.54
SHKBP1-222ENST00000600320 MDS2Q8NDY4 140 aa18.41■□□□□ 0.54
SHKBP1-222ENST00000600320 CHDHQ8NE62 594 aaPredicted RBP18.41■□□□□ 0.54
SHKBP1-222ENST00000600320 OR10G3Q8NGC4 313 aa18.41■□□□□ 0.54
SHKBP1-222ENST00000600320 OR8J3Q8NGG0 315 aa18.41■□□□□ 0.54
SHKBP1-222ENST00000600320 TMEM125Q96AQ2 219 aa18.41■□□□□ 0.54
SHKBP1-222ENST00000600320 NODALQ96S42 347 aa18.41■□□□□ 0.54
SHKBP1-222ENST00000600320 ADOQ96SZ5 270 aa18.41■□□□□ 0.54
SHKBP1-222ENST00000600320 SDF2Q99470 211 aa18.41■□□□□ 0.54
SHKBP1-222ENST00000600320 THUMPD3Q9BV44 507 aaKnown RBP18.41■□□□□ 0.54
SHKBP1-222ENST00000600320 CMTM6Q9NX76 183 aa18.41■□□□□ 0.54
SHKBP1-222ENST00000600320 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.41■□□□□ 0.54
SHKBP1-222ENST00000600320 ERVH48-1M5A8F1 160 aa18.4■□□□□ 0.54
SHKBP1-222ENST00000600320 CYP4B1P13584 511 aa18.4■□□□□ 0.54
SHKBP1-222ENST00000600320 CALB2P22676 271 aa18.4■□□□□ 0.54
SHKBP1-222ENST00000600320 ANXA11P50995 505 aaKnown RBP18.4■□□□□ 0.54
SHKBP1-222ENST00000600320 GZMMP51124 257 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms