RNA–Protein interactions for RNA: ENST00000600310.5

UPF1-209, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-209ENST00000600310 SECISBP2Q96T21 854 aaKnown RBP17.79■□□□□ 0.44
UPF1-209ENST00000600310 SLC6A13Q9NSD5 602 aa17.79■□□□□ 0.44
UPF1-209ENST00000600310 CNIH4Q9P003 139 aa17.79■□□□□ 0.44
UPF1-209ENST00000600310 MRTO4Q9UKD2 239 aaKnown RBP17.79■□□□□ 0.44
UPF1-209ENST00000600310 CHCHD2Q9Y6H1 151 aaPredicted RBP17.79■□□□□ 0.44
UPF1-209ENST00000600310 NUP214P35658 2090 aaPredicted RBP17.78■□□□□ 0.44
UPF1-209ENST00000600310 A0A096LPI6 279 aa17.78■□□□□ 0.44
UPF1-209ENST00000600310 UGT2B11O75310 529 aa17.78■□□□□ 0.44
UPF1-209ENST00000600310 ANP32DO95626 131 aa17.78■□□□□ 0.44
UPF1-209ENST00000600310 CCL3P10147 92 aa17.78■□□□□ 0.44
UPF1-209ENST00000600310 CNR1P21554 472 aa17.78■□□□□ 0.44
UPF1-209ENST00000600310 CHI3L1P36222 383 aaPredicted RBP17.78■□□□□ 0.44
UPF1-209ENST00000600310 PNLIPRP2P54317 469 aa17.78■□□□□ 0.44
UPF1-209ENST00000600310 RPP38P78345 283 aaKnown RBP17.78■□□□□ 0.44
UPF1-209ENST00000600310 MRPS22P82650 360 aaKnown RBP17.78■□□□□ 0.44
UPF1-209ENST00000600310 C19orf57Q0VDD7 668 aa17.78■□□□□ 0.44
UPF1-209ENST00000600310 DECR1Q16698 335 aa17.78■□□□□ 0.44
UPF1-209ENST00000600310 PAGE3Q5JUK9 113 aa17.78■□□□□ 0.44
UPF1-209ENST00000600310 DNAJC14Q6Y2X3 702 aaPredicted RBP17.78■□□□□ 0.44
UPF1-209ENST00000600310 BCORP1Q8N888 145 aa17.78■□□□□ 0.44
UPF1-209ENST00000600310 OR5M3Q8NGP4 307 aa17.78■□□□□ 0.44
UPF1-209ENST00000600310 ZFP90Q8TF47 636 aa17.78■□□□□ 0.44
UPF1-209ENST00000600310 PIK3R3Q92569 461 aa17.78■□□□□ 0.44
UPF1-209ENST00000600310 DIO2Q92813 273 aa17.78■□□□□ 0.44
UPF1-209ENST00000600310 HGDQ93099 445 aa17.78■□□□□ 0.44
UPF1-209ENST00000600310 OTUB1Q96FW1 271 aaPredicted RBP17.78■□□□□ 0.44
UPF1-209ENST00000600310 RMND5BQ96G75 393 aaPredicted RBP17.78■□□□□ 0.44
UPF1-209ENST00000600310 COL21A1Q96P44 957 aa17.78■□□□□ 0.44
UPF1-209ENST00000600310 OR7D2Q96RA2 312 aa17.78■□□□□ 0.44
UPF1-209ENST00000600310 CCT8L2Q96SF2 557 aa17.78■□□□□ 0.44
UPF1-209ENST00000600310 PAIP1Q9H074 479 aaKnown RBP17.78■□□□□ 0.44
UPF1-209ENST00000600310 SERHL2Q9H4I8 314 aa17.78■□□□□ 0.44
UPF1-209ENST00000600310 SACM1LQ9NTJ5 587 aa17.78■□□□□ 0.44
UPF1-209ENST00000600310 LEF1Q9UJU2 399 aaPredicted RBP17.78■□□□□ 0.44
UPF1-209ENST00000600310 CNOT11Q9UKZ1 510 aaKnown RBP17.78■□□□□ 0.44
UPF1-209ENST00000600310 NDUFAF1Q9Y375 327 aa17.78■□□□□ 0.44
UPF1-209ENST00000600310 PIEZO2Q9H5I5 2752 aa17.77■□□□□ 0.44
UPF1-209ENST00000600310 ATMQ13315 3056 aa17.77■□□□□ 0.44
UPF1-209ENST00000600310 ANKRD33BA6NCL7 494 aa17.77■□□□□ 0.44
UPF1-209ENST00000600310 DUXAA6NLW8 204 aa17.77■□□□□ 0.44
UPF1-209ENST00000600310 KCNH1O95259 989 aa17.77■□□□□ 0.44
UPF1-209ENST00000600310 RASAL1O95294 804 aa17.77■□□□□ 0.44
UPF1-209ENST00000600310 KRT75O95678 551 aa17.77■□□□□ 0.44
UPF1-209ENST00000600310 IL33O95760 270 aa17.77■□□□□ 0.44
UPF1-209ENST00000600310 P04436 131 aa17.77■□□□□ 0.44
UPF1-209ENST00000600310 HOXB9P17482 250 aaPredicted RBP17.77■□□□□ 0.44
UPF1-209ENST00000600310 IL12BP29460 328 aa17.77■□□□□ 0.44
UPF1-209ENST00000600310 RPS26P62854 115 aaKnown RBP17.77■□□□□ 0.44
UPF1-209ENST00000600310 EFR3AQ14156 821 aa17.77■□□□□ 0.44
UPF1-209ENST00000600310 GTDC1Q4AE62 458 aa17.77■□□□□ 0.44
UPF1-209ENST00000600310 LRIF1Q5T3J3 769 aa17.77■□□□□ 0.44
UPF1-209ENST00000600310 DESI1Q6ICB0 168 aa17.77■□□□□ 0.44
UPF1-209ENST00000600310 SULF2Q8IWU5 870 aa17.77■□□□□ 0.44
UPF1-209ENST00000600310 FBXW8Q8N3Y1 598 aa17.77■□□□□ 0.44
UPF1-209ENST00000600310 COX18Q8N8Q8 333 aa17.77■□□□□ 0.44
UPF1-209ENST00000600310 FAM110BQ8TC76 370 aa17.77■□□□□ 0.44
UPF1-209ENST00000600310 ADOQ96SZ5 270 aa17.77■□□□□ 0.44
UPF1-209ENST00000600310 BTBD2Q9BX70 525 aa17.77■□□□□ 0.44
UPF1-209ENST00000600310 DEPPQ9NTK1 212 aa17.77■□□□□ 0.44
UPF1-209ENST00000600310 PCDHGB3Q9Y5G1 929 aa17.77■□□□□ 0.44
UPF1-209ENST00000600310 CAPN7Q9Y6W3 813 aa17.77■□□□□ 0.44
UPF1-209ENST00000600310 TTLL8A6PVC2 850 aa17.76■□□□□ 0.43
UPF1-209ENST00000600310 KLRC4-KLRK1H3BQV0 150 aa17.76■□□□□ 0.43
UPF1-209ENST00000600310 ANGPT2O15123 496 aa17.76■□□□□ 0.43
UPF1-209ENST00000600310 PEX1O43933 1283 aa17.76■□□□□ 0.43
UPF1-209ENST00000600310 KCNK2O95069 426 aa17.76■□□□□ 0.43
UPF1-209ENST00000600310 FAM107AO95990 144 aa17.76■□□□□ 0.43
UPF1-209ENST00000600310 C1QCP02747 245 aa17.76■□□□□ 0.43
UPF1-209ENST00000600310 PSMD4P55036 377 aaKnown RBP17.76■□□□□ 0.43
UPF1-209ENST00000600310 POU6F2P78424 691 aaPredicted RBP17.76■□□□□ 0.43
UPF1-209ENST00000600310 TXNL4AP83876 142 aaKnown RBP17.76■□□□□ 0.43
UPF1-209ENST00000600310 MAPRE2Q15555 327 aa17.76■□□□□ 0.43
UPF1-209ENST00000600310 TBCELQ5QJ74 424 aa17.76■□□□□ 0.43
UPF1-209ENST00000600310 TMEM81Q6P7N7 255 aa17.76■□□□□ 0.43
UPF1-209ENST00000600310 PNPLA5Q7Z6Z6 429 aaPredicted RBP17.76■□□□□ 0.43
UPF1-209ENST00000600310 MTDHQ86UE4 582 aaKnown RBP17.76■□□□□ 0.43
UPF1-209ENST00000600310 RNF130Q86XS8 419 aa17.76■□□□□ 0.43
UPF1-209ENST00000600310 CISD2Q8N5K1 135 aaKnown RBP17.76■□□□□ 0.43
UPF1-209ENST00000600310 DPP10Q8N608 796 aa17.76■□□□□ 0.43
UPF1-209ENST00000600310 FAM98AQ8NCA5 519 aaKnown RBP17.76■□□□□ 0.43
UPF1-209ENST00000600310 OR5D16Q8NGK9 328 aa17.76■□□□□ 0.43
UPF1-209ENST00000600310 DNAJB8Q8NHS0 232 aa17.76■□□□□ 0.43
UPF1-209ENST00000600310 CDS1Q92903 461 aa17.76■□□□□ 0.43
UPF1-209ENST00000600310 EFHD2Q96C19 240 aaPredicted RBP17.76■□□□□ 0.43
UPF1-209ENST00000600310 TMCO6Q96DC7 493 aa17.76■□□□□ 0.43
UPF1-209ENST00000600310 TAAR6Q96RI8 345 aa17.76■□□□□ 0.43
UPF1-209ENST00000600310 NODALQ96S42 347 aa17.76■□□□□ 0.43
UPF1-209ENST00000600310 OR51I1Q9H343 314 aa17.76■□□□□ 0.43
UPF1-209ENST00000600310 TPT1P8Q9HAU6 139 aa17.76■□□□□ 0.43
UPF1-209ENST00000600310 PROK2Q9HC23 129 aa17.76■□□□□ 0.43
UPF1-209ENST00000600310 ARMCX1Q9P291 453 aa17.76■□□□□ 0.43
UPF1-209ENST00000600310 ARL2BPQ9Y2Y0 163 aa17.76■□□□□ 0.43
UPF1-209ENST00000600310 PCDHB14Q9Y5E9 798 aa17.76■□□□□ 0.43
UPF1-209ENST00000600310 KCNE3Q9Y6H6 103 aa17.76■□□□□ 0.43
UPF1-209ENST00000600310 COL6A6A6NMZ7 2263 aa17.75■□□□□ 0.43
UPF1-209ENST00000600310 TLN1Q9Y490 2541 aaKnown RBP17.75■□□□□ 0.43
UPF1-209ENST00000600310 ASNA1O43681 348 aa17.75■□□□□ 0.43
UPF1-209ENST00000600310 IGKV1D-16P01601 117 aa17.75■□□□□ 0.43
UPF1-209ENST00000600310 CASP3P42574 277 aa17.75■□□□□ 0.43
UPF1-209ENST00000600310 MAGEA8P43361 318 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms