RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 RGS14O43566 566 aa14.37□□□□□ -0.11
VRK3-221ENST00000600284 SEC22BO75396 215 aa14.37□□□□□ -0.11
VRK3-221ENST00000600284 ZWINTO95229 277 aa14.37□□□□□ -0.11
VRK3-221ENST00000600284 PSMG1O95456 288 aa14.37□□□□□ -0.11
VRK3-221ENST00000600284 IL18BPO95998 194 aa14.37□□□□□ -0.11
VRK3-221ENST00000600284 JUNP05412 331 aaKnown RBP14.37□□□□□ -0.11
VRK3-221ENST00000600284 CYP4B1P13584 511 aa14.37□□□□□ -0.11
VRK3-221ENST00000600284 CTSSP25774 331 aa14.37□□□□□ -0.11
VRK3-221ENST00000600284 OPRM1P35372 400 aa14.37□□□□□ -0.11
VRK3-221ENST00000600284 KIR2DL3P43628 341 aa14.37□□□□□ -0.11
VRK3-221ENST00000600284 ZNF136P52737 540 aa14.37□□□□□ -0.11
VRK3-221ENST00000600284 GFRA1P56159 465 aa14.37□□□□□ -0.11
VRK3-221ENST00000600284 TESK1Q15569 626 aa14.37□□□□□ -0.11
VRK3-221ENST00000600284 PRSS53Q2L4Q9 553 aa14.37□□□□□ -0.11
VRK3-221ENST00000600284 DCST1Q5T197 706 aa14.37□□□□□ -0.11
VRK3-221ENST00000600284 AAGABQ6PD74 315 aa14.37□□□□□ -0.11
VRK3-221ENST00000600284 ADGRE4PQ86SQ3 457 aa14.37□□□□□ -0.11
VRK3-221ENST00000600284 TMEM200AQ86VY9 491 aa14.37□□□□□ -0.11
VRK3-221ENST00000600284 IFNEQ86WN2 208 aa14.37□□□□□ -0.11
VRK3-221ENST00000600284 TRIM42Q8IWZ5 723 aa14.37□□□□□ -0.11
VRK3-221ENST00000600284 CDC26Q8NHZ8 85 aa14.37□□□□□ -0.11
VRK3-221ENST00000600284 EPS8L3Q8TE67 593 aaKnown RBP14.37□□□□□ -0.11
VRK3-221ENST00000600284 RNASE6Q93091 150 aaKnown RBP14.37□□□□□ -0.11
VRK3-221ENST00000600284 ZFP3Q96NJ6 502 aa14.37□□□□□ -0.11
VRK3-221ENST00000600284 GLIPR2Q9H4G4 154 aa14.37□□□□□ -0.11
VRK3-221ENST00000600284 TNFRSF12AQ9NP84 129 aa14.37□□□□□ -0.11
VRK3-221ENST00000600284 C1orf109Q9NX04 203 aa14.37□□□□□ -0.11
VRK3-221ENST00000600284 MKS1Q9NXB0 559 aa14.37□□□□□ -0.11
VRK3-221ENST00000600284 TAS2R10Q9NYW0 307 aa14.37□□□□□ -0.11
VRK3-221ENST00000600284 MRTO4Q9UKD2 239 aaKnown RBP14.37□□□□□ -0.11
VRK3-221ENST00000600284 UPK1AO00322 258 aa14.36□□□□□ -0.11
VRK3-221ENST00000600284 AZIN1O14977 448 aa14.36□□□□□ -0.11
VRK3-221ENST00000600284 TBX19O60806 448 aa14.36□□□□□ -0.11
VRK3-221ENST00000600284 TRIM13O60858 407 aa14.36□□□□□ -0.11
VRK3-221ENST00000600284 NEFHP12036 1026 aa14.36□□□□□ -0.11
VRK3-221ENST00000600284 CHMP24386 653 aa14.36□□□□□ -0.11
VRK3-221ENST00000600284 UQCRC1P31930 480 aa14.36□□□□□ -0.11
VRK3-221ENST00000600284 MC3RP41968 323 aa14.36□□□□□ -0.11
VRK3-221ENST00000600284 GAS1P54826 345 aa14.36□□□□□ -0.11
VRK3-221ENST00000600284 ZNF155Q12901 538 aaPredicted RBP14.36□□□□□ -0.11
VRK3-221ENST00000600284 ZNHIT3Q15649 155 aaPredicted RBP14.36□□□□□ -0.11
VRK3-221ENST00000600284 SPNS3Q6ZMD2 512 aa14.36□□□□□ -0.11
VRK3-221ENST00000600284 C10orf107Q8IVU9 208 aa14.36□□□□□ -0.11
VRK3-221ENST00000600284 C4orf33Q8N1A6 199 aa14.36□□□□□ -0.11
VRK3-221ENST00000600284 RIBC1Q8N443 379 aaPredicted RBP14.36□□□□□ -0.11
VRK3-221ENST00000600284 OR4N2Q8NGD1 307 aa14.36□□□□□ -0.11
VRK3-221ENST00000600284 ELP4Q96EB1 424 aa14.36□□□□□ -0.11
VRK3-221ENST00000600284 AMDHD1Q96NU7 426 aa14.36□□□□□ -0.11
VRK3-221ENST00000600284 IQCGQ9H095 443 aaKnown RBP14.36□□□□□ -0.11
VRK3-221ENST00000600284 C12orf65Q9H3J6 166 aaKnown RBP14.36□□□□□ -0.11
VRK3-221ENST00000600284 LRTM1Q9HBL6 345 aa14.36□□□□□ -0.11
VRK3-221ENST00000600284 SDHAF3Q9NRP4 125 aa14.36□□□□□ -0.11
VRK3-221ENST00000600284 DDX18Q9NVP1 670 aaKnown RBP14.36□□□□□ -0.11
VRK3-221ENST00000600284 FBXL2Q9UKC9 423 aa14.36□□□□□ -0.11
VRK3-221ENST00000600284 CBLCQ9ULV8 474 aa14.36□□□□□ -0.11
VRK3-221ENST00000600284 POLQO75417 2590 aa14.35□□□□□ -0.11
VRK3-221ENST00000600284 FAM221AA4D161 298 aa14.35□□□□□ -0.11
VRK3-221ENST00000600284 ZIC3O60481 467 aa14.35□□□□□ -0.11
VRK3-221ENST00000600284 NME6O75414 186 aaPredicted RBP14.35□□□□□ -0.11
VRK3-221ENST00000600284 CTAG2O75638 210 aa14.35□□□□□ -0.11
VRK3-221ENST00000600284 RCBTB2O95199 551 aa14.35□□□□□ -0.11
VRK3-221ENST00000600284 CHEK2O96017 543 aa14.35□□□□□ -0.11
VRK3-221ENST00000600284 FGF4P08620 206 aa14.35□□□□□ -0.11
VRK3-221ENST00000600284 GRK2P25098 689 aa14.35□□□□□ -0.11
VRK3-221ENST00000600284 PSMD4P55036 377 aaKnown RBP14.35□□□□□ -0.11
VRK3-221ENST00000600284 DSCR4P56555 118 aaPredicted RBP14.35□□□□□ -0.11
VRK3-221ENST00000600284 WNT3P56703 355 aa14.35□□□□□ -0.11
VRK3-221ENST00000600284 EEF1A1P68104 462 aaKnown RBP14.35□□□□□ -0.11
VRK3-221ENST00000600284 PCLAFQ15004 111 aa14.35□□□□□ -0.11
VRK3-221ENST00000600284 BCL2A1Q16548 175 aa14.35□□□□□ -0.11
VRK3-221ENST00000600284 DECR1Q16698 335 aa14.35□□□□□ -0.11
VRK3-221ENST00000600284 EEF1A1P5Q5VTE0 462 aa14.35□□□□□ -0.11
VRK3-221ENST00000600284 CLEC6AQ6EIG7 209 aa14.35□□□□□ -0.11
VRK3-221ENST00000600284 TMEM107Q6UX40 140 aa14.35□□□□□ -0.11
VRK3-221ENST00000600284 Q6ZSR9 355 aa14.35□□□□□ -0.11
VRK3-221ENST00000600284 KIF18BQ86Y91 864 aa14.35□□□□□ -0.11
VRK3-221ENST00000600284 FAM222BQ8WU58 562 aa14.35□□□□□ -0.11
VRK3-221ENST00000600284 WNT2BQ93097 391 aa14.35□□□□□ -0.11
VRK3-221ENST00000600284 EFHD2Q96C19 240 aaPredicted RBP14.35□□□□□ -0.11
VRK3-221ENST00000600284 EGLN2Q96KS0 407 aa14.35□□□□□ -0.11
VRK3-221ENST00000600284 FCRL1Q96LA6 429 aa14.35□□□□□ -0.11
VRK3-221ENST00000600284 TM9SF2Q99805 663 aa14.35□□□□□ -0.11
VRK3-221ENST00000600284 CCT7Q99832 543 aa14.35□□□□□ -0.11
VRK3-221ENST00000600284 TUBA1CQ9BQE3 449 aa14.35□□□□□ -0.11
VRK3-221ENST00000600284 LMF2Q9BU23 707 aaKnown RBP14.35□□□□□ -0.11
VRK3-221ENST00000600284 GATA5Q9BWX5 397 aaPredicted RBP14.35□□□□□ -0.11
VRK3-221ENST00000600284 ACBD3Q9H3P7 528 aa14.35□□□□□ -0.11
VRK3-221ENST00000600284 Q9N2J8 555 aa14.35□□□□□ -0.11
VRK3-221ENST00000600284 JKAMPQ9P055 326 aa14.35□□□□□ -0.11
VRK3-221ENST00000600284 ABCG2Q9UNQ0 655 aa14.35□□□□□ -0.11
VRK3-221ENST00000600284 TMED5Q9Y3A6 229 aa14.35□□□□□ -0.11
VRK3-221ENST00000600284 CCDC168Q8NDH2 2452 aa14.34□□□□□ -0.11
VRK3-221ENST00000600284 H0Y3Z8 333 aa14.34□□□□□ -0.11
VRK3-221ENST00000600284 FADS1O60427 444 aa14.34□□□□□ -0.11
VRK3-221ENST00000600284 NUDT17P0C025 328 aa14.34□□□□□ -0.11
VRK3-221ENST00000600284 DPP4P27487 766 aa14.34□□□□□ -0.11
VRK3-221ENST00000600284 EVI2BP34910 448 aa14.34□□□□□ -0.11
VRK3-221ENST00000600284 CLK3P49761 638 aaKnown RBP14.34□□□□□ -0.11
VRK3-221ENST00000600284 LHX2P50458 406 aa14.34□□□□□ -0.11
VRK3-221ENST00000600284 GAB1Q13480 694 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms