RNA–Protein interactions for RNA: ENST00000600118.5

CHMP2A-206, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-206ENST00000600118 IL33O95760 270 aa11.66□□□□□ -0.54
CHMP2A-206ENST00000600118 IGKV1D-16P01601 117 aa11.66□□□□□ -0.54
CHMP2A-206ENST00000600118 GUSBP08236 651 aa11.66□□□□□ -0.54
CHMP2A-206ENST00000600118 NUDT7P0C024 238 aa11.66□□□□□ -0.54
CHMP2A-206ENST00000600118 SOX3P41225 446 aa11.66□□□□□ -0.54
CHMP2A-206ENST00000600118 CRATP43155 626 aa11.66□□□□□ -0.54
CHMP2A-206ENST00000600118 ANXA11P50995 505 aaKnown RBP11.66□□□□□ -0.54
CHMP2A-206ENST00000600118 SSR4P51571 173 aa11.66□□□□□ -0.54
CHMP2A-206ENST00000600118 POLE2P56282 527 aa11.66□□□□□ -0.54
CHMP2A-206ENST00000600118 NRG3P56975 720 aa11.66□□□□□ -0.54
CHMP2A-206ENST00000600118 DSTNP60981 165 aa11.66□□□□□ -0.54
CHMP2A-206ENST00000600118 POU6F2P78424 691 aaPredicted RBP11.66□□□□□ -0.54
CHMP2A-206ENST00000600118 SLC25A3Q00325 362 aa11.66□□□□□ -0.54
CHMP2A-206ENST00000600118 ADRM1Q16186 407 aa11.66□□□□□ -0.54
CHMP2A-206ENST00000600118 ST3GAL2Q16842 350 aa11.66□□□□□ -0.54
CHMP2A-206ENST00000600118 ZNF791Q3KP31 576 aaPredicted RBP11.66□□□□□ -0.54
CHMP2A-206ENST00000600118 RINLQ6ZS11 566 aa11.66□□□□□ -0.54
CHMP2A-206ENST00000600118 CALHM3Q86XJ0 350 aa11.66□□□□□ -0.54
CHMP2A-206ENST00000600118 GPALPP1Q8IXQ4 340 aa11.66□□□□□ -0.54
CHMP2A-206ENST00000600118 PGAM4Q8N0Y7 254 aa11.66□□□□□ -0.54
CHMP2A-206ENST00000600118 BCORP1Q8N888 145 aa11.66□□□□□ -0.54
CHMP2A-206ENST00000600118 COX18Q8N8Q8 333 aa11.66□□□□□ -0.54
CHMP2A-206ENST00000600118 XAGE5Q8WWM1 108 aa11.66□□□□□ -0.54
CHMP2A-206ENST00000600118 TTC9Q92623 222 aa11.66□□□□□ -0.54
CHMP2A-206ENST00000600118 TMBIM1Q969X1 311 aa11.66□□□□□ -0.54
CHMP2A-206ENST00000600118 SPACA9Q96E40 222 aaPredicted RBP11.66□□□□□ -0.54
CHMP2A-206ENST00000600118 OMA1Q96E52 524 aa11.66□□□□□ -0.54
CHMP2A-206ENST00000600118 RMND5BQ96G75 393 aaPredicted RBP11.66□□□□□ -0.54
CHMP2A-206ENST00000600118 THUMPD3Q9BV44 507 aaKnown RBP11.66□□□□□ -0.54
CHMP2A-206ENST00000600118 C1orf21Q9H246 121 aa11.66□□□□□ -0.54
CHMP2A-206ENST00000600118 ZBTB20Q9HC78 741 aaPredicted RBP11.66□□□□□ -0.54
CHMP2A-206ENST00000600118 A4GALTQ9NPC4 353 aa11.66□□□□□ -0.54
CHMP2A-206ENST00000600118 THUMPD1Q9NXG2 353 aaKnown RBP11.66□□□□□ -0.54
CHMP2A-206ENST00000600118 AP3M1Q9Y2T2 418 aa11.66□□□□□ -0.54
CHMP2A-206ENST00000600118 OR10H1Q9Y4A9 318 aa11.66□□□□□ -0.54
CHMP2A-206ENST00000600118 PCDHGB3Q9Y5G1 929 aa11.66□□□□□ -0.54
CHMP2A-206ENST00000600118 MED13Q9UHV7 2174 aa11.66□□□□□ -0.54
CHMP2A-206ENST00000600118 MAP1BP46821 2468 aaKnown RBP11.66□□□□□ -0.54
CHMP2A-206ENST00000600118 ZZEF1O43149 2961 aa11.66□□□□□ -0.54
CHMP2A-206ENST00000600118 NUP214P35658 2090 aaPredicted RBP11.66□□□□□ -0.54
CHMP2A-206ENST00000600118 USP24Q9UPU5 2620 aa11.65□□□□□ -0.54
CHMP2A-206ENST00000600118 OR6C70A6NIJ9 312 aa11.65□□□□□ -0.54
CHMP2A-206ENST00000600118 MKRN2OSH3BPM6 223 aa11.65□□□□□ -0.54
CHMP2A-206ENST00000600118 NME4O00746 187 aa11.65□□□□□ -0.54
CHMP2A-206ENST00000600118 PPM1BO75688 479 aa11.65□□□□□ -0.54
CHMP2A-206ENST00000600118 AK1P00568 194 aa11.65□□□□□ -0.54
CHMP2A-206ENST00000600118 ALPPP05187 535 aa11.65□□□□□ -0.54
CHMP2A-206ENST00000600118 TFPTP0C1Z6 253 aa11.65□□□□□ -0.54
CHMP2A-206ENST00000600118 ARAFP10398 606 aa11.65□□□□□ -0.54
CHMP2A-206ENST00000600118 HLCSP50747 726 aa11.65□□□□□ -0.54
CHMP2A-206ENST00000600118 SLC7A2P52569 658 aa11.65□□□□□ -0.54
CHMP2A-206ENST00000600118 PLCXD2Q0VAA5 305 aa11.65□□□□□ -0.54
CHMP2A-206ENST00000600118 TUBA3CQ13748 450 aa11.65□□□□□ -0.54
CHMP2A-206ENST00000600118 NTRK2Q16620 822 aa11.65□□□□□ -0.54
CHMP2A-206ENST00000600118 DECR1Q16698 335 aa11.65□□□□□ -0.54
CHMP2A-206ENST00000600118 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.65□□□□□ -0.54
CHMP2A-206ENST00000600118 COL28A1Q2UY09 1125 aa11.65□□□□□ -0.54
CHMP2A-206ENST00000600118 ARHGAP11BQ3KRB8 267 aa11.65□□□□□ -0.54
CHMP2A-206ENST00000600118 DCST2Q5T1A1 773 aa11.65□□□□□ -0.54
CHMP2A-206ENST00000600118 GCNT6Q5T4J0 391 aa11.65□□□□□ -0.54
CHMP2A-206ENST00000600118 ATAD3BQ5T9A4 648 aa11.65□□□□□ -0.54
CHMP2A-206ENST00000600118 TUBA3EQ6PEY2 450 aa11.65□□□□□ -0.54
CHMP2A-206ENST00000600118 C19orf48Q6RUI8 117 aa11.65□□□□□ -0.54
CHMP2A-206ENST00000600118 OPN5Q6U736 354 aa11.65□□□□□ -0.54
CHMP2A-206ENST00000600118 C16orf89Q6UX73 402 aa11.65□□□□□ -0.54
CHMP2A-206ENST00000600118 IGFL3Q6UXB1 125 aa11.65□□□□□ -0.54
CHMP2A-206ENST00000600118 LINC00696Q6ZRV3 163 aa11.65□□□□□ -0.54
CHMP2A-206ENST00000600118 ZAR1Q86SH2 424 aa11.65□□□□□ -0.54
CHMP2A-206ENST00000600118 SERPINA11Q86U17 422 aa11.65□□□□□ -0.54
CHMP2A-206ENST00000600118 ZNF227Q86WZ6 799 aa11.65□□□□□ -0.54
CHMP2A-206ENST00000600118 PTOV1Q86YD1 416 aa11.65□□□□□ -0.54
CHMP2A-206ENST00000600118 DND1Q8IYX4 353 aaKnown RBP11.65□□□□□ -0.54
CHMP2A-206ENST00000600118 PRR22Q8IZ63 422 aa11.65□□□□□ -0.54
CHMP2A-206ENST00000600118 RNF138Q8WVD3 245 aa11.65□□□□□ -0.54
CHMP2A-206ENST00000600118 DIO2Q92813 273 aa11.65□□□□□ -0.54
CHMP2A-206ENST00000600118 HAS2Q92819 552 aa11.65□□□□□ -0.54
CHMP2A-206ENST00000600118 SLC7A6OSQ96CW6 309 aaPredicted RBP11.65□□□□□ -0.54
CHMP2A-206ENST00000600118 SDF2Q99470 211 aa11.65□□□□□ -0.54
CHMP2A-206ENST00000600118 TMEM38AQ9H6F2 299 aa11.65□□□□□ -0.54
CHMP2A-206ENST00000600118 SH2D2AQ9NP31 389 aa11.65□□□□□ -0.54
CHMP2A-206ENST00000600118 EXD2Q9NVH0 621 aa11.65□□□□□ -0.54
CHMP2A-206ENST00000600118 FBXO34Q9NWN3 711 aa11.65□□□□□ -0.54
CHMP2A-206ENST00000600118 NDE1Q9NXR1 346 aa11.65□□□□□ -0.54
CHMP2A-206ENST00000600118 TAS2R1Q9NYW7 299 aa11.65□□□□□ -0.54
CHMP2A-206ENST00000600118 ABI3Q9P2A4 366 aa11.65□□□□□ -0.54
CHMP2A-206ENST00000600118 TMEM181Q9P2C4 612 aa11.65□□□□□ -0.54
CHMP2A-206ENST00000600118 TUBD1Q9UJT1 453 aa11.65□□□□□ -0.54
CHMP2A-206ENST00000600118 LIPT1Q9Y234 373 aa11.65□□□□□ -0.54
CHMP2A-206ENST00000600118 PCDHGB7Q9Y5F8 929 aa11.65□□□□□ -0.54
CHMP2A-206ENST00000600118 CACNA1GO43497 2377 aa11.65□□□□□ -0.54
CHMP2A-206ENST00000600118 EBAG9O00559 213 aa11.64□□□□□ -0.55
CHMP2A-206ENST00000600118 ZIC2O95409 532 aaPredicted RBP11.64□□□□□ -0.55
CHMP2A-206ENST00000600118 WDPCPO95876 746 aa11.64□□□□□ -0.55
CHMP2A-206ENST00000600118 PDGFAP04085 211 aa11.64□□□□□ -0.55
CHMP2A-206ENST00000600118 LCN1P31025 176 aa11.64□□□□□ -0.55
CHMP2A-206ENST00000600118 CD96P40200 585 aa11.64□□□□□ -0.55
CHMP2A-206ENST00000600118 CYB561P49447 251 aa11.64□□□□□ -0.55
CHMP2A-206ENST00000600118 PNLIPRP2P54317 469 aa11.64□□□□□ -0.55
CHMP2A-206ENST00000600118 EEFSECP57772 596 aaKnown RBP11.64□□□□□ -0.55
CHMP2A-206ENST00000600118 RHDQ02161 417 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms