RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 HYKKA2RU49 373 aa15.89■□□□□ 0.13
SHKBP1-216ENST00000598201 OR2W5A6NFC9 320 aa15.89■□□□□ 0.13
SHKBP1-216ENST00000598201 CLDN24A6NM45 220 aa15.89■□□□□ 0.13
SHKBP1-216ENST00000598201 SYT5O00445 386 aa15.89■□□□□ 0.13
SHKBP1-216ENST00000598201 CDC123O75794 336 aaPredicted RBP15.89■□□□□ 0.13
SHKBP1-216ENST00000598201 SEC14L2O76054 403 aa15.89■□□□□ 0.13
SHKBP1-216ENST00000598201 CHMP24386 653 aa15.89■□□□□ 0.13
SHKBP1-216ENST00000598201 HPCAP84074 193 aa15.89■□□□□ 0.13
SHKBP1-216ENST00000598201 DUSP8Q13202 625 aa15.89■□□□□ 0.13
SHKBP1-216ENST00000598201 DGCR6Q14129 220 aa15.89■□□□□ 0.13
SHKBP1-216ENST00000598201 KCNAB1Q14722 419 aa15.89■□□□□ 0.13
SHKBP1-216ENST00000598201 PTGES3Q15185 160 aaKnown RBP15.89■□□□□ 0.13
SHKBP1-216ENST00000598201 PGBD2Q6P3X8 592 aa15.89■□□□□ 0.13
SHKBP1-216ENST00000598201 METTL27Q8N6F8 245 aaPredicted RBP15.89■□□□□ 0.13
SHKBP1-216ENST00000598201 RHOXF1Q8NHV9 184 aa15.89■□□□□ 0.13
SHKBP1-216ENST00000598201 ZNF675Q8TD23 568 aa15.89■□□□□ 0.13
SHKBP1-216ENST00000598201 PIK3R3Q92569 461 aa15.89■□□□□ 0.13
SHKBP1-216ENST00000598201 PRRC1Q96M27 445 aa15.89■□□□□ 0.13
SHKBP1-216ENST00000598201 SDF2Q99470 211 aa15.89■□□□□ 0.13
SHKBP1-216ENST00000598201 FNDC11Q9BVV2 318 aa15.89■□□□□ 0.13
SHKBP1-216ENST00000598201 SPRTNQ9H040 489 aaPredicted RBP15.89■□□□□ 0.13
SHKBP1-216ENST00000598201 PIGUQ9H490 435 aa15.89■□□□□ 0.13
SHKBP1-216ENST00000598201 FBXO34Q9NWN3 711 aa15.89■□□□□ 0.13
SHKBP1-216ENST00000598201 TPRKBQ9Y3C4 175 aa15.89■□□□□ 0.13
SHKBP1-216ENST00000598201 TMEM184BQ9Y519 407 aaPredicted RBP15.89■□□□□ 0.13
SHKBP1-216ENST00000598201 FAM20BO75063 409 aa15.88■□□□□ 0.13
SHKBP1-216ENST00000598201 ZBTB11O95625 1053 aaPredicted RBP15.88■□□□□ 0.13
SHKBP1-216ENST00000598201 OXSR1O95747 527 aaPredicted RBP15.88■□□□□ 0.13
SHKBP1-216ENST00000598201 AGR2O95994 175 aa15.88■□□□□ 0.13
SHKBP1-216ENST00000598201 ADAP00813 363 aa15.88■□□□□ 0.13
SHKBP1-216ENST00000598201 IGFBP1P08833 259 aaPredicted RBP15.88■□□□□ 0.13
SHKBP1-216ENST00000598201 SLC35E2P0CK97 266 aa15.88■□□□□ 0.13
SHKBP1-216ENST00000598201 GIMD1P0DJR0 217 aa15.88■□□□□ 0.13
SHKBP1-216ENST00000598201 SMIM11AP58511 58 aa15.88■□□□□ 0.13
SHKBP1-216ENST00000598201 HOXC5Q00444 222 aa15.88■□□□□ 0.13
SHKBP1-216ENST00000598201 C12orf43Q96C57 262 aaKnown RBP15.88■□□□□ 0.13
SHKBP1-216ENST00000598201 VCX3AQ9NNX9 186 aa15.88■□□□□ 0.13
SHKBP1-216ENST00000598201 IRAK4Q9NWZ3 460 aa15.88■□□□□ 0.13
SHKBP1-216ENST00000598201 SCN3BQ9NY72 215 aa15.88■□□□□ 0.13
SHKBP1-216ENST00000598201 EPHA6Q9UF33 1036 aa15.88■□□□□ 0.13
SHKBP1-216ENST00000598201 WDR45Q9Y484 360 aa15.88■□□□□ 0.13
SHKBP1-216ENST00000598201 SNX5Q9Y5X3 404 aa15.88■□□□□ 0.13
SHKBP1-216ENST00000598201 TP53BP1Q12888 1972 aaPredicted RBP15.88■□□□□ 0.13
SHKBP1-216ENST00000598201 CBX7O95931 251 aa15.88■□□□□ 0.13
SHKBP1-216ENST00000598201 RNH1P13489 461 aaKnown RBP15.88■□□□□ 0.13
SHKBP1-216ENST00000598201 GABRB1P18505 474 aa15.88■□□□□ 0.13
SHKBP1-216ENST00000598201 DCKP27707 260 aa15.88■□□□□ 0.13
SHKBP1-216ENST00000598201 PRKAR1BP31321 381 aa15.88■□□□□ 0.13
SHKBP1-216ENST00000598201 TTKP33981 857 aa15.88■□□□□ 0.13
SHKBP1-216ENST00000598201 CRISP1P54107 249 aa15.88■□□□□ 0.13
SHKBP1-216ENST00000598201 CFHR1Q03591 330 aa15.88■□□□□ 0.13
SHKBP1-216ENST00000598201 EMX1Q04741 257 aaPredicted RBP15.88■□□□□ 0.13
SHKBP1-216ENST00000598201 NDUFA9Q16795 377 aa15.88■□□□□ 0.13
SHKBP1-216ENST00000598201 DHRS4L2Q6PKH6 230 aa15.88■□□□□ 0.13
SHKBP1-216ENST00000598201 SLC35F3Q8IY50 421 aa15.88■□□□□ 0.13
SHKBP1-216ENST00000598201 ZNF540Q8NDQ6 660 aa15.88■□□□□ 0.13
SHKBP1-216ENST00000598201 PIGKQ92643 395 aa15.88■□□□□ 0.13
SHKBP1-216ENST00000598201 LOXL4Q96JB6 756 aa15.88■□□□□ 0.13
SHKBP1-216ENST00000598201 UCK2Q9BZX2 261 aa15.88■□□□□ 0.13
SHKBP1-216ENST00000598201 RAB33BQ9H082 229 aa15.88■□□□□ 0.13
SHKBP1-216ENST00000598201 MTHFD2LQ9H903 347 aaPredicted RBP15.88■□□□□ 0.13
SHKBP1-216ENST00000598201 PDE7BQ9NP56 450 aa15.88■□□□□ 0.13
SHKBP1-216ENST00000598201 PILRBQ9UKJ0 227 aa15.88■□□□□ 0.13
SHKBP1-216ENST00000598201 MGAT4BQ9UQ53 548 aa15.88■□□□□ 0.13
SHKBP1-216ENST00000598201 PCDHGA10Q9Y5H3 936 aa15.88■□□□□ 0.13
SHKBP1-216ENST00000598201 ASXL3Q9C0F0 2248 aa15.87■□□□□ 0.13
SHKBP1-216ENST00000598201 CABIN1Q9Y6J0 2220 aa15.87■□□□□ 0.13
SHKBP1-216ENST00000598201 MUC6Q6W4X9 2439 aa15.87■□□□□ 0.13
SHKBP1-216ENST00000598201 ZAR1LA6NP61 321 aa15.87■□□□□ 0.13
SHKBP1-216ENST00000598201 SOX14O95416 240 aa15.87■□□□□ 0.13
SHKBP1-216ENST00000598201 NSA2O95478 260 aaKnown RBP15.87■□□□□ 0.13
SHKBP1-216ENST00000598201 NTN1O95631 604 aa15.87■□□□□ 0.13
SHKBP1-216ENST00000598201 ALOX5P09917 674 aa15.87■□□□□ 0.13
SHKBP1-216ENST00000598201 POU1F1P28069 291 aa15.87■□□□□ 0.13
SHKBP1-216ENST00000598201 NBL1P41271 181 aa15.87■□□□□ 0.13
SHKBP1-216ENST00000598201 MAP3K8P41279 467 aa15.87■□□□□ 0.13
SHKBP1-216ENST00000598201 MAP2K4P45985 399 aa15.87■□□□□ 0.13
SHKBP1-216ENST00000598201 AVPR1BP47901 424 aa15.87■□□□□ 0.13
SHKBP1-216ENST00000598201 EPHA4P54764 986 aa15.87■□□□□ 0.13
SHKBP1-216ENST00000598201 BTG2P78543 158 aa15.87■□□□□ 0.13
SHKBP1-216ENST00000598201 BNC1Q01954 994 aa15.87■□□□□ 0.13
SHKBP1-216ENST00000598201 SLC13A2Q13183 592 aa15.87■□□□□ 0.13
SHKBP1-216ENST00000598201 FAM53BQ14153 422 aa15.87■□□□□ 0.13
SHKBP1-216ENST00000598201 INAVAQ3KP66 663 aa15.87■□□□□ 0.13
SHKBP1-216ENST00000598201 SUMF1Q8NBK3 374 aa15.87■□□□□ 0.13
SHKBP1-216ENST00000598201 MORN4Q8NDC4 146 aa15.87■□□□□ 0.13
SHKBP1-216ENST00000598201 MUL1Q969V5 352 aa15.87■□□□□ 0.13
SHKBP1-216ENST00000598201 ZDHHC12Q96GR4 267 aa15.87■□□□□ 0.13
SHKBP1-216ENST00000598201 DGCR6LQ9BY27 220 aa15.87■□□□□ 0.13
SHKBP1-216ENST00000598201 ZNF350Q9GZX5 532 aa15.87■□□□□ 0.13
SHKBP1-216ENST00000598201 ZNF443Q9Y2A4 671 aaPredicted RBP15.87■□□□□ 0.13
SHKBP1-216ENST00000598201 NTNG1Q9Y2I2 539 aa15.87■□□□□ 0.13
SHKBP1-216ENST00000598201 CLDN16Q9Y5I7 305 aa15.87■□□□□ 0.13
SHKBP1-216ENST00000598201 IGHV1OR21-1A0A087WYE8 117 aa15.87■□□□□ 0.13
SHKBP1-216ENST00000598201 OR10H2O60403 315 aa15.87■□□□□ 0.13
SHKBP1-216ENST00000598201 TRMUO75648 421 aaKnown RBP15.87■□□□□ 0.13
SHKBP1-216ENST00000598201 SLITRK5O94991 958 aa15.87■□□□□ 0.13
SHKBP1-216ENST00000598201 INMTO95050 263 aa15.87■□□□□ 0.13
SHKBP1-216ENST00000598201 MT-ND2P03891 347 aa15.87■□□□□ 0.13
SHKBP1-216ENST00000598201 GNSP15586 552 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms