RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 OR5M10Q6IEU7 315 aa13.72□□□□□ -0.21
LIG1-215ENST00000597901 ANKRD26P1Q6NSI1 321 aa13.72□□□□□ -0.21
LIG1-215ENST00000597901 ZNF551Q7Z340 670 aaPredicted RBP13.72□□□□□ -0.21
LIG1-215ENST00000597901 TRIM42Q8IWZ5 723 aa13.72□□□□□ -0.21
LIG1-215ENST00000597901 OR2L13Q8N349 312 aa13.72□□□□□ -0.21
LIG1-215ENST00000597901 RNF138Q8WVD3 245 aa13.72□□□□□ -0.21
LIG1-215ENST00000597901 CAVIN3Q969G5 261 aa13.72□□□□□ -0.21
LIG1-215ENST00000597901 EFHD2Q96C19 240 aaPredicted RBP13.72□□□□□ -0.21
LIG1-215ENST00000597901 MECRQ9BV79 373 aa13.72□□□□□ -0.21
LIG1-215ENST00000597901 TMEM109Q9BVC6 243 aa13.72□□□□□ -0.21
LIG1-215ENST00000597901 OR2B2Q9GZK3 357 aa13.72□□□□□ -0.21
LIG1-215ENST00000597901 REEP4Q9H6H4 257 aa13.72□□□□□ -0.21
LIG1-215ENST00000597901 MCCC2Q9HCC0 563 aa13.72□□□□□ -0.21
LIG1-215ENST00000597901 MRPS18CQ9Y3D5 142 aaKnown RBP13.72□□□□□ -0.21
LIG1-215ENST00000597901 DNAJC13O75165 2243 aa13.71□□□□□ -0.21
LIG1-215ENST00000597901 TMEM233B4DJY2 109 aa13.71□□□□□ -0.21
LIG1-215ENST00000597901 SYT5O00445 386 aa13.71□□□□□ -0.21
LIG1-215ENST00000597901 ZIC3O60481 467 aa13.71□□□□□ -0.21
LIG1-215ENST00000597901 TBX19O60806 448 aa13.71□□□□□ -0.21
LIG1-215ENST00000597901 PSMG1O95456 288 aa13.71□□□□□ -0.21
LIG1-215ENST00000597901 NEFHP12036 1026 aa13.71□□□□□ -0.21
LIG1-215ENST00000597901 CYP4B1P13584 511 aa13.71□□□□□ -0.21
LIG1-215ENST00000597901 CPN1P15169 458 aa13.71□□□□□ -0.21
LIG1-215ENST00000597901 SDC1P18827 310 aa13.71□□□□□ -0.21
LIG1-215ENST00000597901 CAPN3P20807 821 aa13.71□□□□□ -0.21
LIG1-215ENST00000597901 GCKP35557 465 aa13.71□□□□□ -0.21
LIG1-215ENST00000597901 GAS1P54826 345 aa13.71□□□□□ -0.21
LIG1-215ENST00000597901 DLX5P56178 289 aa13.71□□□□□ -0.21
LIG1-215ENST00000597901 ZNF155Q12901 538 aaPredicted RBP13.71□□□□□ -0.21
LIG1-215ENST00000597901 DCST1Q5T197 706 aa13.71□□□□□ -0.21
LIG1-215ENST00000597901 NSUN5P2Q63ZY6 315 aa13.71□□□□□ -0.21
LIG1-215ENST00000597901 WDR53Q7Z5U6 358 aaPredicted RBP13.71□□□□□ -0.21
LIG1-215ENST00000597901 LACC1Q8IV20 430 aa13.71□□□□□ -0.21
LIG1-215ENST00000597901 DDIASQ8IXT1 998 aa13.71□□□□□ -0.21
LIG1-215ENST00000597901 NAXEQ8NCW5 288 aa13.71□□□□□ -0.21
LIG1-215ENST00000597901 OR14L1PQ8NHC6 308 aa13.71□□□□□ -0.21
LIG1-215ENST00000597901 ZPLD1Q8TCW7 415 aa13.71□□□□□ -0.21
LIG1-215ENST00000597901 TSSK3Q96PN8 268 aa13.71□□□□□ -0.21
LIG1-215ENST00000597901 TRIB1Q96RU8 372 aa13.71□□□□□ -0.21
LIG1-215ENST00000597901 CCT7Q99832 543 aa13.71□□□□□ -0.21
LIG1-215ENST00000597901 CALHM2Q9HA72 323 aa13.71□□□□□ -0.21
LIG1-215ENST00000597901 DDX18Q9NVP1 670 aaKnown RBP13.71□□□□□ -0.21
LIG1-215ENST00000597901 TAS2R10Q9NYW0 307 aa13.71□□□□□ -0.21
LIG1-215ENST00000597901 SH3BP4Q9P0V3 963 aa13.71□□□□□ -0.21
LIG1-215ENST00000597901 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.71□□□□□ -0.21
LIG1-215ENST00000597901 FBXL2Q9UKC9 423 aa13.71□□□□□ -0.21
LIG1-215ENST00000597901 CBLCQ9ULV8 474 aa13.71□□□□□ -0.21
LIG1-215ENST00000597901 WIF1Q9Y5W5 379 aa13.71□□□□□ -0.21
LIG1-215ENST00000597901 V9GYY5 206 aaPredicted RBP13.71□□□□□ -0.21
LIG1-215ENST00000597901 CD8B2A6NJW9 211 aa13.7□□□□□ -0.22
LIG1-215ENST00000597901 LSM1O15116 133 aaKnown RBP13.7□□□□□ -0.22
LIG1-215ENST00000597901 FADS1O60427 444 aa13.7□□□□□ -0.22
LIG1-215ENST00000597901 IL2RAP01589 272 aa13.7□□□□□ -0.22
LIG1-215ENST00000597901 IFI6P09912 130 aa13.7□□□□□ -0.22
LIG1-215ENST00000597901 PRPS2P11908 318 aa13.7□□□□□ -0.22
LIG1-215ENST00000597901 BCKDHAP12694 445 aa13.7□□□□□ -0.22
LIG1-215ENST00000597901 GRK2P25098 689 aa13.7□□□□□ -0.22
LIG1-215ENST00000597901 SRD5A2P31213 254 aa13.7□□□□□ -0.22
LIG1-215ENST00000597901 GABRA3P34903 492 aa13.7□□□□□ -0.22
LIG1-215ENST00000597901 STARP49675 285 aa13.7□□□□□ -0.22
LIG1-215ENST00000597901 GALNTL6Q49A17 601 aa13.7□□□□□ -0.22
LIG1-215ENST00000597901 ZNF385BQ569K4 471 aa13.7□□□□□ -0.22
LIG1-215ENST00000597901 POMZP3Q6PJE2 187 aa13.7□□□□□ -0.22
LIG1-215ENST00000597901 ZCCHC23Q6ZST2 131 aa13.7□□□□□ -0.22
LIG1-215ENST00000597901 TWIST2Q8WVJ9 160 aa13.7□□□□□ -0.22
LIG1-215ENST00000597901 CIDECQ96AQ7 238 aaPredicted RBP13.7□□□□□ -0.22
LIG1-215ENST00000597901 PPCDCQ96CD2 204 aa13.7□□□□□ -0.22
LIG1-215ENST00000597901 ZNF764Q96H86 408 aaPredicted RBP13.7□□□□□ -0.22
LIG1-215ENST00000597901 LMF2Q9BU23 707 aaKnown RBP13.7□□□□□ -0.22
LIG1-215ENST00000597901 PARD6BQ9BYG5 372 aa13.7□□□□□ -0.22
LIG1-215ENST00000597901 ZNF629Q9UEG4 869 aaPredicted RBP13.7□□□□□ -0.22
LIG1-215ENST00000597901 TMED5Q9Y3A6 229 aa13.7□□□□□ -0.22
LIG1-215ENST00000597901 PKDREJQ9NTG1 2253 aa13.7□□□□□ -0.22
LIG1-215ENST00000597901 B4DXG7 233 aa13.69□□□□□ -0.22
LIG1-215ENST00000597901 PIP5K1BO14986 540 aa13.69□□□□□ -0.22
LIG1-215ENST00000597901 PDPK1O15530 556 aa13.69□□□□□ -0.22
LIG1-215ENST00000597901 TYROBPO43914 113 aa13.69□□□□□ -0.22
LIG1-215ENST00000597901 ZNF500O60304 480 aaPredicted RBP13.69□□□□□ -0.22
LIG1-215ENST00000597901 IL33O95760 270 aa13.69□□□□□ -0.22
LIG1-215ENST00000597901 BPGMP07738 259 aa13.69□□□□□ -0.22
LIG1-215ENST00000597901 ARRB2P32121 409 aa13.69□□□□□ -0.22
LIG1-215ENST00000597901 GPC1P35052 558 aa13.69□□□□□ -0.22
LIG1-215ENST00000597901 MANFP55145 182 aaKnown RBP13.69□□□□□ -0.22
LIG1-215ENST00000597901 GFRA1P56159 465 aa13.69□□□□□ -0.22
LIG1-215ENST00000597901 RPL38P63173 70 aaKnown RBP13.69□□□□□ -0.22
LIG1-215ENST00000597901 SRYQ05066 204 aa13.69□□□□□ -0.22
LIG1-215ENST00000597901 HSPB3Q12988 150 aa13.69□□□□□ -0.22
LIG1-215ENST00000597901 ZNHIT3Q15649 155 aaPredicted RBP13.69□□□□□ -0.22
LIG1-215ENST00000597901 DECR1Q16698 335 aa13.69□□□□□ -0.22
LIG1-215ENST00000597901 CES4AQ5XG92 561 aa13.69□□□□□ -0.22
LIG1-215ENST00000597901 ENPP6Q6UWR7 440 aa13.69□□□□□ -0.22
LIG1-215ENST00000597901 ARSKQ6UWY0 536 aa13.69□□□□□ -0.22
LIG1-215ENST00000597901 OR6Y1Q8NGX8 325 aa13.69□□□□□ -0.22
LIG1-215ENST00000597901 CEP70Q8NHQ1 597 aa13.69□□□□□ -0.22
LIG1-215ENST00000597901 CLHC1Q8NHS4 586 aa13.69□□□□□ -0.22
LIG1-215ENST00000597901 ZNF559Q9BR84 538 aa13.69□□□□□ -0.22
LIG1-215ENST00000597901 DSN1Q9H410 356 aa13.69□□□□□ -0.22
LIG1-215ENST00000597901 SLC24A3Q9HC58 644 aa13.69□□□□□ -0.22
LIG1-215ENST00000597901 Q9N2J8 555 aa13.69□□□□□ -0.22
LIG1-215ENST00000597901 SDHAF3Q9NRP4 125 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms