RNA–Protein interactions for RNA: ENST00000597724.6

SSBP4-204, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-204ENST00000597724 OR5P2Q8WZ92 322 aa15.31■□□□□ 0.04
SSBP4-204ENST00000597724 GIMAP5Q96F15 307 aa15.31■□□□□ 0.04
SSBP4-204ENST00000597724 C3orf14Q9HBI5 128 aa15.31■□□□□ 0.04
SSBP4-204ENST00000597724 GALNT9Q9HCQ5 603 aa15.31■□□□□ 0.04
SSBP4-204ENST00000597724 Q9N2J8 555 aa15.31■□□□□ 0.04
SSBP4-204ENST00000597724 ACKR4Q9NPB9 350 aa15.31■□□□□ 0.04
SSBP4-204ENST00000597724 SIRT3Q9NTG7 399 aaPredicted RBP15.31■□□□□ 0.04
SSBP4-204ENST00000597724 MARCOQ9UEW3 520 aaPredicted RBP15.31■□□□□ 0.04
SSBP4-204ENST00000597724 LIPGQ9Y5X9 500 aa15.31■□□□□ 0.04
SSBP4-204ENST00000597724 PRAMEF25A6NGN4 478 aa15.3■□□□□ 0.04
SSBP4-204ENST00000597724 TRPC5OSA6NMA1 111 aa15.3■□□□□ 0.04
SSBP4-204ENST00000597724 HMGB1P1B2RPK0 211 aaPredicted RBP15.3■□□□□ 0.04
SSBP4-204ENST00000597724 ANKRD28O15084 1053 aa15.3■□□□□ 0.04
SSBP4-204ENST00000597724 HCN1O60741 890 aa15.3■□□□□ 0.04
SSBP4-204ENST00000597724 SASH3O75995 380 aa15.3■□□□□ 0.04
SSBP4-204ENST00000597724 NKX2-2O95096 273 aa15.3■□□□□ 0.04
SSBP4-204ENST00000597724 EPHA3P29320 983 aa15.3■□□□□ 0.04
SSBP4-204ENST00000597724 IL12BP29460 328 aa15.3■□□□□ 0.04
SSBP4-204ENST00000597724 MASP1P48740 699 aa15.3■□□□□ 0.04
SSBP4-204ENST00000597724 PRKAG1P54619 331 aa15.3■□□□□ 0.04
SSBP4-204ENST00000597724 LSM12Q3MHD2 195 aaKnown RBP15.3■□□□□ 0.04
SSBP4-204ENST00000597724 CDRT4Q8N9R6 151 aa15.3■□□□□ 0.04
SSBP4-204ENST00000597724 RNF138Q8WVD3 245 aa15.3■□□□□ 0.04
SSBP4-204ENST00000597724 HOXB13Q92826 284 aaPredicted RBP15.3■□□□□ 0.04
SSBP4-204ENST00000597724 EFHD2Q96C19 240 aaPredicted RBP15.3■□□□□ 0.04
SSBP4-204ENST00000597724 FAM120BQ96EK7 910 aaKnown RBP15.3■□□□□ 0.04
SSBP4-204ENST00000597724 CCDC120Q96HB5 630 aa15.3■□□□□ 0.04
SSBP4-204ENST00000597724 GNRHR2Q96P88 292 aa15.3■□□□□ 0.04
SSBP4-204ENST00000597724 PHF12Q96QT6 1004 aa15.3■□□□□ 0.04
SSBP4-204ENST00000597724 DUSP26Q9BV47 211 aa15.3■□□□□ 0.04
SSBP4-204ENST00000597724 OSBPL11Q9BXB4 747 aa15.3■□□□□ 0.04
SSBP4-204ENST00000597724 UBQLN3Q9H347 655 aa15.3■□□□□ 0.04
SSBP4-204ENST00000597724 WDR55Q9H6Y2 383 aaPredicted RBP15.3■□□□□ 0.04
SSBP4-204ENST00000597724 EQTNQ9NQ60 294 aa15.3■□□□□ 0.04
SSBP4-204ENST00000597724 KLRF1Q9NZS2 232 aa15.3■□□□□ 0.04
SSBP4-204ENST00000597724 SUCOQ9UBS9 1254 aaKnown RBP15.3■□□□□ 0.04
SSBP4-204ENST00000597724 B4GALT7Q9UBV7 327 aa15.3■□□□□ 0.04
SSBP4-204ENST00000597724 CBLCQ9ULV8 474 aa15.3■□□□□ 0.04
SSBP4-204ENST00000597724 C15orf41Q9Y2V0 281 aa15.3■□□□□ 0.04
SSBP4-204ENST00000597724 NUP214P35658 2090 aaPredicted RBP15.29■□□□□ 0.04
SSBP4-204ENST00000597724 C2orf72A6NCS6 295 aa15.29■□□□□ 0.04
SSBP4-204ENST00000597724 OR14I1A6ND48 311 aa15.29■□□□□ 0.04
SSBP4-204ENST00000597724 AQP7O14520 342 aa15.29■□□□□ 0.04
SSBP4-204ENST00000597724 ADAM10O14672 748 aa15.29■□□□□ 0.04
SSBP4-204ENST00000597724 GNB5O14775 395 aa15.29■□□□□ 0.04
SSBP4-204ENST00000597724 TPOP07202 933 aa15.29■□□□□ 0.04
SSBP4-204ENST00000597724 ALDOCP09972 364 aaKnown RBP15.29■□□□□ 0.04
SSBP4-204ENST00000597724 CYP4B1P13584 511 aa15.29■□□□□ 0.04
SSBP4-204ENST00000597724 ELAVL4P26378 380 aaKnown RBP15.29■□□□□ 0.04
SSBP4-204ENST00000597724 GABRA3P34903 492 aa15.29■□□□□ 0.04
SSBP4-204ENST00000597724 MAN2A2P49641 1150 aa15.29■□□□□ 0.04
SSBP4-204ENST00000597724 MRPS22P82650 360 aaKnown RBP15.29■□□□□ 0.04
SSBP4-204ENST00000597724 PRR5P85299 388 aa15.29■□□□□ 0.04
SSBP4-204ENST00000597724 DECR1Q16698 335 aa15.29■□□□□ 0.04
SSBP4-204ENST00000597724 PGS1Q32NB8 556 aa15.29■□□□□ 0.04
SSBP4-204ENST00000597724 VPS26BQ4G0F5 336 aa15.29■□□□□ 0.04
SSBP4-204ENST00000597724 EMC4Q5J8M3 183 aa15.29■□□□□ 0.04
SSBP4-204ENST00000597724 EXOSC6Q5RKV6 272 aaKnown RBP15.29■□□□□ 0.04
SSBP4-204ENST00000597724 TIGD3Q6B0B8 471 aa15.29■□□□□ 0.04
SSBP4-204ENST00000597724 MFSD12Q6NUT3 480 aa15.29■□□□□ 0.04
SSBP4-204ENST00000597724 MTFR2Q6P444 385 aa15.29■□□□□ 0.04
SSBP4-204ENST00000597724 CD163Q86VB7 1156 aa15.29■□□□□ 0.04
SSBP4-204ENST00000597724 OR8J2Q8NGG1 315 aa15.29■□□□□ 0.04
SSBP4-204ENST00000597724 OR1J4Q8NGS1 313 aa15.29■□□□□ 0.04
SSBP4-204ENST00000597724 PIWIL2Q8TC59 973 aaKnown RBP15.29■□□□□ 0.04
SSBP4-204ENST00000597724 MS4A4EQ96PG1 132 aa15.29■□□□□ 0.04
SSBP4-204ENST00000597724 DPY30Q9C005 99 aa15.29■□□□□ 0.04
SSBP4-204ENST00000597724 LDAHQ9H6V9 325 aa15.29■□□□□ 0.04
SSBP4-204ENST00000597724 CXorf36Q9H7Y0 433 aa15.29■□□□□ 0.04
SSBP4-204ENST00000597724 MEMO1Q9Y316 297 aa15.29■□□□□ 0.04
SSBP4-204ENST00000597724 HRH3Q9Y5N1 445 aa15.29■□□□□ 0.04
SSBP4-204ENST00000597724 FREM3P0C091 2139 aa15.29■□□□□ 0.04
SSBP4-204ENST00000597724 PCNX1Q96RV3 2341 aa15.28■□□□□ 0.04
SSBP4-204ENST00000597724 TRGV5A0A0B4J1U4 118 aa15.28■□□□□ 0.04
SSBP4-204ENST00000597724 GOLGA8QA0A0J9YX86 632 aa15.28■□□□□ 0.04
SSBP4-204ENST00000597724 GXYLT2A0PJZ3 443 aa15.28■□□□□ 0.04
SSBP4-204ENST00000597724 GOLGA8OA6NCC3 632 aa15.28■□□□□ 0.04
SSBP4-204ENST00000597724 NPIPA2E9PIF3 369 aa15.28■□□□□ 0.04
SSBP4-204ENST00000597724 E9PLN8 166 aa15.28■□□□□ 0.04
SSBP4-204ENST00000597724 GOLGA8NF8WBI6 632 aa15.28■□□□□ 0.04
SSBP4-204ENST00000597724 NPIPA3F8WFD2 350 aa15.28■□□□□ 0.04
SSBP4-204ENST00000597724 ZNF195O14628 629 aa15.28■□□□□ 0.04
SSBP4-204ENST00000597724 IL33O95760 270 aa15.28■□□□□ 0.04
SSBP4-204ENST00000597724 C6orf47O95873 294 aa15.28■□□□□ 0.04
SSBP4-204ENST00000597724 HPNP05981 417 aa15.28■□□□□ 0.04
SSBP4-204ENST00000597724 ESRRAP11474 423 aaPredicted RBP15.28■□□□□ 0.04
SSBP4-204ENST00000597724 GDF1P27539 372 aa15.28■□□□□ 0.04
SSBP4-204ENST00000597724 PTPN6P29350 595 aa15.28■□□□□ 0.04
SSBP4-204ENST00000597724 CCT3P49368 545 aaKnown RBP15.28■□□□□ 0.04
SSBP4-204ENST00000597724 GXYLT1Q4G148 440 aa15.28■□□□□ 0.04
SSBP4-204ENST00000597724 OR4F3Q6IEY1 312 aa15.28■□□□□ 0.04
SSBP4-204ENST00000597724 ZCCHC12Q6PEW1 402 aa15.28■□□□□ 0.04
SSBP4-204ENST00000597724 ANGPTL8Q6UXH0 198 aa15.28■□□□□ 0.04
SSBP4-204ENST00000597724 C3P1Q6ZMU1 363 aa15.28■□□□□ 0.04
SSBP4-204ENST00000597724 SZRD1Q7Z422 152 aa15.28■□□□□ 0.04
SSBP4-204ENST00000597724 SPATA19Q7Z5L4 167 aa15.28■□□□□ 0.04
SSBP4-204ENST00000597724 WDSUB1Q8N9V3 476 aa15.28■□□□□ 0.04
SSBP4-204ENST00000597724 SLC16A11Q8NCK7 471 aa15.28■□□□□ 0.04
SSBP4-204ENST00000597724 NEIL3Q8TAT5 605 aa15.28■□□□□ 0.04
SSBP4-204ENST00000597724 GPR151Q8TDV0 419 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms