RNA–Protein interactions for RNA: ENST00000597618.5

TRIM28-210, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-210ENST00000597618 TEX9Q8N6V9 391 aa9.08□□□□□ -0.96
TRIM28-210ENST00000597618 FADS6Q8N9I5 356 aa9.08□□□□□ -0.96
TRIM28-210ENST00000597618 LILRB1Q8NHL6 650 aaPredicted RBP9.08□□□□□ -0.96
TRIM28-210ENST00000597618 RNF138Q8WVD3 245 aa9.08□□□□□ -0.96
TRIM28-210ENST00000597618 GMPPAQ96IJ6 420 aaPredicted RBP9.08□□□□□ -0.96
TRIM28-210ENST00000597618 UBXN10Q96LJ8 280 aa9.08□□□□□ -0.96
TRIM28-210ENST00000597618 BTBD9Q96Q07 612 aa9.08□□□□□ -0.96
TRIM28-210ENST00000597618 SERPINI1Q99574 410 aa9.08□□□□□ -0.96
TRIM28-210ENST00000597618 SHARPINQ9H0F6 387 aa9.08□□□□□ -0.96
TRIM28-210ENST00000597618 ALG2Q9H553 416 aa9.08□□□□□ -0.96
TRIM28-210ENST00000597618 ESRP2Q9H6T0 727 aaKnown RBP9.08□□□□□ -0.96
TRIM28-210ENST00000597618 ALG9Q9H6U8 611 aa9.08□□□□□ -0.96
TRIM28-210ENST00000597618 SMYD2Q9NRG4 433 aa9.08□□□□□ -0.96
TRIM28-210ENST00000597618 PPP4R1LQ9P1A2 415 aa9.08□□□□□ -0.96
TRIM28-210ENST00000597618 WHRNQ9P202 907 aa9.08□□□□□ -0.96
TRIM28-210ENST00000597618 TXNDC16Q9P2K2 825 aa9.08□□□□□ -0.96
TRIM28-210ENST00000597618 ZNF639Q9UID6 485 aa9.08□□□□□ -0.96
TRIM28-210ENST00000597618 ADAM29Q9UKF5 820 aa9.08□□□□□ -0.96
TRIM28-210ENST00000597618 GPR55Q9Y2T6 319 aaPredicted RBP9.08□□□□□ -0.96
TRIM28-210ENST00000597618 MTO1Q9Y2Z2 717 aaKnown RBP9.08□□□□□ -0.96
TRIM28-210ENST00000597618 ZNF337Q9Y3M9 751 aa9.08□□□□□ -0.96
TRIM28-210ENST00000597618 C1orf226A1L170 272 aa9.07□□□□□ -0.96
TRIM28-210ENST00000597618 OR2M5A3KFT3 312 aa9.07□□□□□ -0.96
TRIM28-210ENST00000597618 GOLGA6L6A8MZA4 724 aa9.07□□□□□ -0.96
TRIM28-210ENST00000597618 B4DXG7 233 aa9.07□□□□□ -0.96
TRIM28-210ENST00000597618 UBXN8O00124 270 aa9.07□□□□□ -0.96
TRIM28-210ENST00000597618 GPRIN2O60269 458 aa9.07□□□□□ -0.96
TRIM28-210ENST00000597618 TSPAN2O60636 221 aa9.07□□□□□ -0.96
TRIM28-210ENST00000597618 GUCY1B2O75343 617 aa9.07□□□□□ -0.96
TRIM28-210ENST00000597618 IL11P20809 199 aa9.07□□□□□ -0.96
TRIM28-210ENST00000597618 FEN1P39748 380 aaKnown RBP9.07□□□□□ -0.96
TRIM28-210ENST00000597618 EMDP50402 254 aa9.07□□□□□ -0.96
TRIM28-210ENST00000597618 GAS1P54826 345 aa9.07□□□□□ -0.96
TRIM28-210ENST00000597618 GPX6P59796 221 aa9.07□□□□□ -0.96
TRIM28-210ENST00000597618 RAB10P61026 200 aa9.07□□□□□ -0.96
TRIM28-210ENST00000597618 VLDLRP98155 873 aa9.07□□□□□ -0.96
TRIM28-210ENST00000597618 ZNF844Q08AG5 666 aa9.07□□□□□ -0.96
TRIM28-210ENST00000597618 FAPQ12884 760 aa9.07□□□□□ -0.96
TRIM28-210ENST00000597618 ZKSCAN8Q15776 578 aaPredicted RBP9.07□□□□□ -0.96
TRIM28-210ENST00000597618 SGCBQ16585 318 aa9.07□□□□□ -0.96
TRIM28-210ENST00000597618 NRF1Q16656 503 aa9.07□□□□□ -0.96
TRIM28-210ENST00000597618 ZNF672Q499Z4 452 aaPredicted RBP9.07□□□□□ -0.96
TRIM28-210ENST00000597618 ALKBH2Q6NS38 261 aa9.07□□□□□ -0.96
TRIM28-210ENST00000597618 PPP4R4Q6NUP7 873 aa9.07□□□□□ -0.96
TRIM28-210ENST00000597618 SLC48A1Q6P1K1 146 aa9.07□□□□□ -0.96
TRIM28-210ENST00000597618 DNAJC14Q6Y2X3 702 aaPredicted RBP9.07□□□□□ -0.96
TRIM28-210ENST00000597618 PAGE2Q7Z2X7 111 aa9.07□□□□□ -0.96
TRIM28-210ENST00000597618 SPC24Q8NBT2 197 aa9.07□□□□□ -0.96
TRIM28-210ENST00000597618 FBXO36Q8NEA4 188 aa9.07□□□□□ -0.96
TRIM28-210ENST00000597618 STEAP2Q8NFT2 490 aa9.07□□□□□ -0.96
TRIM28-210ENST00000597618 OR2M3Q8NG83 312 aa9.07□□□□□ -0.96
TRIM28-210ENST00000597618 WDR20Q8TBZ3 569 aa9.07□□□□□ -0.96
TRIM28-210ENST00000597618 C11orf24Q96F05 449 aaPredicted RBP9.07□□□□□ -0.96
TRIM28-210ENST00000597618 TNFRSF13CQ96RJ3 184 aa9.07□□□□□ -0.96
TRIM28-210ENST00000597618 GPR22Q99680 433 aa9.07□□□□□ -0.96
TRIM28-210ENST00000597618 NTMT1Q9BV86 223 aa9.07□□□□□ -0.96
TRIM28-210ENST00000597618 PRRG4Q9BZD6 226 aa9.07□□□□□ -0.96
TRIM28-210ENST00000597618 DSN1Q9H410 356 aa9.07□□□□□ -0.96
TRIM28-210ENST00000597618 PTGES2Q9H7Z7 377 aa9.07□□□□□ -0.96
TRIM28-210ENST00000597618 ZBTB26Q9HCK0 441 aa9.07□□□□□ -0.96
TRIM28-210ENST00000597618 NGBQ9NPG2 151 aa9.07□□□□□ -0.96
TRIM28-210ENST00000597618 FAIMQ9NVQ4 179 aa9.07□□□□□ -0.96
TRIM28-210ENST00000597618 PCDHA9Q9Y5H5 950 aa9.07□□□□□ -0.96
TRIM28-210ENST00000597618 AP4B1Q9Y6B7 739 aa9.07□□□□□ -0.96
TRIM28-210ENST00000597618 IGHV4-30-2A0A087WSY4 118 aa9.06□□□□□ -0.96
TRIM28-210ENST00000597618 A0A096LNT2 108 aa9.06□□□□□ -0.96
TRIM28-210ENST00000597618 C17orf51A8MQB3 221 aa9.06□□□□□ -0.96
TRIM28-210ENST00000597618 SYCE1LA8MT33 242 aa9.06□□□□□ -0.96
TRIM28-210ENST00000597618 NDUFS7O75251 213 aa9.06□□□□□ -0.96
TRIM28-210ENST00000597618 ERAL1O75616 437 aaKnown RBP9.06□□□□□ -0.96
TRIM28-210ENST00000597618 BCAS2O75934 225 aaPredicted RBP9.06□□□□□ -0.96
TRIM28-210ENST00000597618 KLK1P06870 262 aa9.06□□□□□ -0.96
TRIM28-210ENST00000597618 CT45A8P0DMV1 189 aa9.06□□□□□ -0.96
TRIM28-210ENST00000597618 CT45A9P0DMV2 189 aa9.06□□□□□ -0.96
TRIM28-210ENST00000597618 PCSK2P16519 638 aa9.06□□□□□ -0.96
TRIM28-210ENST00000597618 SRD5A1P18405 259 aa9.06□□□□□ -0.96
TRIM28-210ENST00000597618 IVDP26440 423 aa9.06□□□□□ -0.96
TRIM28-210ENST00000597618 CDC25BP30305 580 aa9.06□□□□□ -0.96
TRIM28-210ENST00000597618 EVI2BP34910 448 aa9.06□□□□□ -0.96
TRIM28-210ENST00000597618 NUDT6P53370 316 aa9.06□□□□□ -0.96
TRIM28-210ENST00000597618 MAPK12P53778 367 aa9.06□□□□□ -0.96
TRIM28-210ENST00000597618 CORO7P57737 925 aa9.06□□□□□ -0.96
TRIM28-210ENST00000597618 DSCR9P59020 149 aa9.06□□□□□ -0.96
TRIM28-210ENST00000597618 RUNX1T1Q06455 604 aa9.06□□□□□ -0.96
TRIM28-210ENST00000597618 LOXL1Q08397 574 aaPredicted RBP9.06□□□□□ -0.96
TRIM28-210ENST00000597618 CTU2Q2VPK5 515 aaKnown RBP9.06□□□□□ -0.96
TRIM28-210ENST00000597618 PGGHGQ32M88 737 aa9.06□□□□□ -0.96
TRIM28-210ENST00000597618 TRMT12Q53H54 448 aaKnown RBP9.06□□□□□ -0.96
TRIM28-210ENST00000597618 CT45A2Q5DJT8 189 aa9.06□□□□□ -0.96
TRIM28-210ENST00000597618 NCMAPQ5T1S8 102 aa9.06□□□□□ -0.96
TRIM28-210ENST00000597618 CCNYL2Q5T2Q4 361 aa9.06□□□□□ -0.96
TRIM28-210ENST00000597618 CLEC2AQ6UVW9 174 aa9.06□□□□□ -0.96
TRIM28-210ENST00000597618 ISCA2Q86U28 154 aa9.06□□□□□ -0.96
TRIM28-210ENST00000597618 ACTRT1Q8TDG2 376 aa9.06□□□□□ -0.96
TRIM28-210ENST00000597618 ROBO4Q8WZ75 1007 aa9.06□□□□□ -0.96
TRIM28-210ENST00000597618 CDKL2Q92772 493 aa9.06□□□□□ -0.96
TRIM28-210ENST00000597618 S100PBPQ96BU1 408 aa9.06□□□□□ -0.96
TRIM28-210ENST00000597618 KLHL29Q96CT2 875 aa9.06□□□□□ -0.96
TRIM28-210ENST00000597618 ERP27Q96DN0 273 aa9.06□□□□□ -0.96
TRIM28-210ENST00000597618 ATOH8Q96SQ7 321 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms