RNA–Protein interactions for RNA: ENST00000596814.5

VRK3-212, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,736 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-212ENST00000596814 LRRC74BQ6ZQY2 392 aa13.58□□□□□ -0.24
VRK3-212ENST00000596814 NDUFAF7Q7L592 441 aa13.58□□□□□ -0.24
VRK3-212ENST00000596814 OLIG3Q7RTU3 272 aa13.58□□□□□ -0.24
VRK3-212ENST00000596814 RAB43Q86YS6 212 aa13.58□□□□□ -0.24
VRK3-212ENST00000596814 C10orf67Q8IYJ2 551 aa13.58□□□□□ -0.24
VRK3-212ENST00000596814 EID3Q8N140 333 aa13.58□□□□□ -0.24
VRK3-212ENST00000596814 GOLM1Q8NBJ4 401 aa13.58□□□□□ -0.24
VRK3-212ENST00000596814 LCORQ96JN0 433 aaPredicted RBP13.58□□□□□ -0.24
VRK3-212ENST00000596814 RNF145Q96MT1 663 aa13.58□□□□□ -0.24
VRK3-212ENST00000596814 ZNF607Q96SK3 696 aa13.58□□□□□ -0.24
VRK3-212ENST00000596814 BCL2L10Q9HD36 194 aa13.58□□□□□ -0.24
VRK3-212ENST00000596814 IL17BQ9UHF5 180 aa13.58□□□□□ -0.24
VRK3-212ENST00000596814 RPS6KA6Q9UK32 745 aa13.58□□□□□ -0.24
VRK3-212ENST00000596814 SAMD4AQ9UPU9 718 aaKnown RBP13.58□□□□□ -0.24
VRK3-212ENST00000596814 V9GYQ6 96 aa13.58□□□□□ -0.24
VRK3-212ENST00000596814 A0A0G2JPF8 293 aa13.57□□□□□ -0.24
VRK3-212ENST00000596814 DHRS12A0PJE2 317 aa13.57□□□□□ -0.24
VRK3-212ENST00000596814 HNRNPCL2B2RXH8 293 aa13.57□□□□□ -0.24
VRK3-212ENST00000596814 HNRNPCL3B7ZW38 293 aa13.57□□□□□ -0.24
VRK3-212ENST00000596814 SPTBN2O15020 2390 aa13.57□□□□□ -0.24
VRK3-212ENST00000596814 OPN1SWP03999 348 aa13.57□□□□□ -0.24
VRK3-212ENST00000596814 HNRNPCL4P0DMR1 293 aa13.57□□□□□ -0.24
VRK3-212ENST00000596814 PSMA4P25789 261 aaKnown RBP13.57□□□□□ -0.24
VRK3-212ENST00000596814 CRYBA2P53672 197 aa13.57□□□□□ -0.24
VRK3-212ENST00000596814 RNF4P78317 190 aa13.57□□□□□ -0.24
VRK3-212ENST00000596814 TBC1D25Q3MII6 688 aa13.57□□□□□ -0.24
VRK3-212ENST00000596814 FIGNL1Q6PIW4 674 aa13.57□□□□□ -0.24
VRK3-212ENST00000596814 FRRS1Q6ZNA5 592 aa13.57□□□□□ -0.24
VRK3-212ENST00000596814 MRGPREQ86SM8 312 aa13.57□□□□□ -0.24
VRK3-212ENST00000596814 KRT73Q86Y46 540 aa13.57□□□□□ -0.24
VRK3-212ENST00000596814 AMER2Q8N7J2 671 aa13.57□□□□□ -0.24
VRK3-212ENST00000596814 OR4N2Q8NGD1 307 aa13.57□□□□□ -0.24
VRK3-212ENST00000596814 FAM122AQ96E09 287 aa13.57□□□□□ -0.24
VRK3-212ENST00000596814 IMMP1LQ96LU5 166 aa13.57□□□□□ -0.24
VRK3-212ENST00000596814 SDF2Q99470 211 aa13.57□□□□□ -0.24
VRK3-212ENST00000596814 SCNM1Q9BWG6 230 aa13.57□□□□□ -0.24
VRK3-212ENST00000596814 ZNF350Q9GZX5 532 aa13.57□□□□□ -0.24
VRK3-212ENST00000596814 NXF5Q9H1B4 397 aaKnown RBP13.57□□□□□ -0.24
VRK3-212ENST00000596814 SLC38A1Q9H2H9 487 aa13.57□□□□□ -0.24
VRK3-212ENST00000596814 OLAHQ9NV23 265 aa13.57□□□□□ -0.24
VRK3-212ENST00000596814 WDR70Q9NW82 654 aa13.57□□□□□ -0.24
VRK3-212ENST00000596814 CBLCQ9ULV8 474 aa13.57□□□□□ -0.24
VRK3-212ENST00000596814 WDR45Q9Y484 360 aa13.57□□□□□ -0.24
VRK3-212ENST00000596814 DSPPQ9NZW4 1301 aa13.56□□□□□ -0.24
VRK3-212ENST00000596814 M0QX08 132 aa13.56□□□□□ -0.24
VRK3-212ENST00000596814 PRKNO60260 465 aaPredicted RBP13.56□□□□□ -0.24
VRK3-212ENST00000596814 MGRN1O60291 552 aa13.56□□□□□ -0.24
VRK3-212ENST00000596814 FKBP6O75344 327 aa13.56□□□□□ -0.24
VRK3-212ENST00000596814 STX11O75558 287 aa13.56□□□□□ -0.24
VRK3-212ENST00000596814 KRT36O76013 467 aa13.56□□□□□ -0.24
VRK3-212ENST00000596814 KCNK2O95069 426 aa13.56□□□□□ -0.24
VRK3-212ENST00000596814 ZNF682O95780 498 aa13.56□□□□□ -0.24
VRK3-212ENST00000596814 IFNA14P01570 189 aa13.56□□□□□ -0.24
VRK3-212ENST00000596814 GPIP06744 558 aa13.56□□□□□ -0.24
VRK3-212ENST00000596814 LIFP15018 202 aa13.56□□□□□ -0.24
VRK3-212ENST00000596814 SPINK2P20155 84 aa13.56□□□□□ -0.24
VRK3-212ENST00000596814 DRD5P21918 477 aa13.56□□□□□ -0.24
VRK3-212ENST00000596814 PIGAP37287 484 aa13.56□□□□□ -0.24
VRK3-212ENST00000596814 CHRNEQ04844 493 aa13.56□□□□□ -0.24
VRK3-212ENST00000596814 ELOAQ14241 798 aaKnown RBP13.56□□□□□ -0.24
VRK3-212ENST00000596814 CYBRD1Q53TN4 286 aa13.56□□□□□ -0.24
VRK3-212ENST00000596814 PLAG1Q6DJT9 500 aa13.56□□□□□ -0.24
VRK3-212ENST00000596814 CBLL1Q75N03 491 aa13.56□□□□□ -0.24
VRK3-212ENST00000596814 ZNF441Q8N8Z8 693 aa13.56□□□□□ -0.24
VRK3-212ENST00000596814 ZSCAN1Q8NBB4 408 aa13.56□□□□□ -0.24
VRK3-212ENST00000596814 C17orf47Q8NEP4 570 aa13.56□□□□□ -0.24
VRK3-212ENST00000596814 OR8K3Q8NH51 312 aa13.56□□□□□ -0.24
VRK3-212ENST00000596814 NUBPLQ8TB37 319 aa13.56□□□□□ -0.24
VRK3-212ENST00000596814 M1APQ8TC57 530 aa13.56□□□□□ -0.24
VRK3-212ENST00000596814 PYDC1Q8WXC3 89 aa13.56□□□□□ -0.24
VRK3-212ENST00000596814 POP5Q969H6 163 aaKnown RBP13.56□□□□□ -0.24
VRK3-212ENST00000596814 TAMM41Q96BW9 452 aa13.56□□□□□ -0.24
VRK3-212ENST00000596814 COL21A1Q96P44 957 aa13.56□□□□□ -0.24
VRK3-212ENST00000596814 EFHD1Q9BUP0 239 aa13.56□□□□□ -0.24
VRK3-212ENST00000596814 ZNF160Q9HCG1 818 aa13.56□□□□□ -0.24
VRK3-212ENST00000596814 ADPRHL2Q9NX46 363 aa13.56□□□□□ -0.24
VRK3-212ENST00000596814 ANAPC2Q9UJX6 822 aa13.56□□□□□ -0.24
VRK3-212ENST00000596814 FBXL4Q9UKA2 621 aa13.56□□□□□ -0.24
VRK3-212ENST00000596814 GPC6Q9Y625 555 aaPredicted RBP13.56□□□□□ -0.24
VRK3-212ENST00000596814 ACOX3O15254 700 aa13.56□□□□□ -0.24
VRK3-212ENST00000596814 SERPINB7O75635 380 aa13.56□□□□□ -0.24
VRK3-212ENST00000596814 ZFAND5O76080 213 aa13.56□□□□□ -0.24
VRK3-212ENST00000596814 ZIC2O95409 532 aaPredicted RBP13.56□□□□□ -0.24
VRK3-212ENST00000596814 HPP00738 406 aa13.56□□□□□ -0.24
VRK3-212ENST00000596814 UMPSP11172 480 aa13.56□□□□□ -0.24
VRK3-212ENST00000596814 ETS2P15036 469 aa13.56□□□□□ -0.24
VRK3-212ENST00000596814 ATP6V1C1P21283 382 aa13.56□□□□□ -0.24
VRK3-212ENST00000596814 RFX3P48380 749 aa13.56□□□□□ -0.24
VRK3-212ENST00000596814 NR0B1P51843 470 aaKnown RBP13.56□□□□□ -0.24
VRK3-212ENST00000596814 CYP27C1Q4G0S4 372 aa13.56□□□□□ -0.24
VRK3-212ENST00000596814 TYW3Q6IPR3 259 aaKnown RBP13.56□□□□□ -0.24
VRK3-212ENST00000596814 ZFP1Q6P2D0 407 aa13.56□□□□□ -0.24
VRK3-212ENST00000596814 ENPP6Q6UWR7 440 aa13.56□□□□□ -0.24
VRK3-212ENST00000596814 EIF3MQ7L2H7 374 aaKnown RBP13.56□□□□□ -0.24
VRK3-212ENST00000596814 ADGRG5Q8IZF4 528 aa13.56□□□□□ -0.24
VRK3-212ENST00000596814 ZNF619Q8N2I2 560 aa13.56□□□□□ -0.24
VRK3-212ENST00000596814 FAM86B1Q8N7N1 296 aa13.56□□□□□ -0.24
VRK3-212ENST00000596814 OR5L2Q8NGL0 311 aa13.56□□□□□ -0.24
VRK3-212ENST00000596814 ELP5Q8TE02 316 aa13.56□□□□□ -0.24
VRK3-212ENST00000596814 ADAMTS17Q8TE56 1095 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms