RNA–Protein interactions for RNA: ENST00000593026.1

DDX39A-221, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 657 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-221ENST00000593026 DIO2Q92813 273 aa13.73□□□□□ -0.21
DDX39A-221ENST00000593026 EFHD2Q96C19 240 aaPredicted RBP13.73□□□□□ -0.21
DDX39A-221ENST00000593026 SNRNP40Q96DI7 357 aaKnown RBP13.73□□□□□ -0.21
DDX39A-221ENST00000593026 RMND5BQ96G75 393 aaPredicted RBP13.73□□□□□ -0.21
DDX39A-221ENST00000593026 SLC35G5Q96KT7 338 aa13.73□□□□□ -0.21
DDX39A-221ENST00000593026 COL21A1Q96P44 957 aa13.73□□□□□ -0.21
DDX39A-221ENST00000593026 ADOQ96SZ5 270 aa13.73□□□□□ -0.21
DDX39A-221ENST00000593026 SECISBP2Q96T21 854 aaKnown RBP13.73□□□□□ -0.21
DDX39A-221ENST00000593026 STACQ99469 402 aa13.73□□□□□ -0.21
DDX39A-221ENST00000593026 SH2D2AQ9NP31 389 aa13.73□□□□□ -0.21
DDX39A-221ENST00000593026 DUSP22Q9NRW4 184 aa13.73□□□□□ -0.21
DDX39A-221ENST00000593026 MRTO4Q9UKD2 239 aaKnown RBP13.73□□□□□ -0.21
DDX39A-221ENST00000593026 SMG1Q96Q15 3661 aaKnown RBP13.72□□□□□ -0.21
DDX39A-221ENST00000593026 NUP214P35658 2090 aaPredicted RBP13.72□□□□□ -0.21
DDX39A-221ENST00000593026 GXYLT2A0PJZ3 443 aa13.72□□□□□ -0.21
DDX39A-221ENST00000593026 G3V3Y1 287 aa13.72□□□□□ -0.21
DDX39A-221ENST00000593026 TSPAN2O60636 221 aa13.72□□□□□ -0.21
DDX39A-221ENST00000593026 UGT2B11O75310 529 aa13.72□□□□□ -0.21
DDX39A-221ENST00000593026 SOX30O94993 753 aa13.72□□□□□ -0.21
DDX39A-221ENST00000593026 CRYABP02511 175 aaKnown RBP13.72□□□□□ -0.21
DDX39A-221ENST00000593026 CAPN3P20807 821 aa13.72□□□□□ -0.21
DDX39A-221ENST00000593026 CNR1P21554 472 aa13.72□□□□□ -0.21
DDX39A-221ENST00000593026 RFX3P48380 749 aa13.72□□□□□ -0.21
DDX39A-221ENST00000593026 TRPC1P48995 793 aa13.72□□□□□ -0.21
DDX39A-221ENST00000593026 MEOX1P50221 254 aa13.72□□□□□ -0.21
DDX39A-221ENST00000593026 PNLIPRP2P54317 469 aa13.72□□□□□ -0.21
DDX39A-221ENST00000593026 PSMD4P55036 377 aaKnown RBP13.72□□□□□ -0.21
DDX39A-221ENST00000593026 RPS26P62854 115 aaKnown RBP13.72□□□□□ -0.21
DDX39A-221ENST00000593026 MRPS22P82650 360 aaKnown RBP13.72□□□□□ -0.21
DDX39A-221ENST00000593026 PMP22Q01453 160 aa13.72□□□□□ -0.21
DDX39A-221ENST00000593026 EFR3AQ14156 821 aa13.72□□□□□ -0.21
DDX39A-221ENST00000593026 SAXO2Q658L1 398 aa13.72□□□□□ -0.21
DDX39A-221ENST00000593026 ANGPTL8Q6UXH0 198 aa13.72□□□□□ -0.21
DDX39A-221ENST00000593026 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.72□□□□□ -0.21
DDX39A-221ENST00000593026 BCORP1Q8N888 145 aa13.72□□□□□ -0.21
DDX39A-221ENST00000593026 OR2M7Q8NG81 312 aa13.72□□□□□ -0.21
DDX39A-221ENST00000593026 CPT1CQ8TCG5 803 aa13.72□□□□□ -0.21
DDX39A-221ENST00000593026 GRHL3Q8TE85 626 aa13.72□□□□□ -0.21
DDX39A-221ENST00000593026 GTF2H4Q92759 462 aa13.72□□□□□ -0.21
DDX39A-221ENST00000593026 CDS1Q92903 461 aa13.72□□□□□ -0.21
DDX39A-221ENST00000593026 HGDQ93099 445 aa13.72□□□□□ -0.21
DDX39A-221ENST00000593026 NEURL3Q96EH8 262 aa13.72□□□□□ -0.21
DDX39A-221ENST00000593026 SLC35A4Q96G79 324 aa13.72□□□□□ -0.21
DDX39A-221ENST00000593026 TAAR6Q96RI8 345 aa13.72□□□□□ -0.21
DDX39A-221ENST00000593026 FAM173AQ9BQD7 235 aa13.72□□□□□ -0.21
DDX39A-221ENST00000593026 PIGUQ9H490 435 aa13.72□□□□□ -0.21
DDX39A-221ENST00000593026 METTL7AQ9H8H3 244 aa13.72□□□□□ -0.21
DDX39A-221ENST00000593026 SLC52A3Q9NQ40 469 aa13.72□□□□□ -0.21
DDX39A-221ENST00000593026 SAR1AQ9NR31 198 aa13.72□□□□□ -0.21
DDX39A-221ENST00000593026 DEPPQ9NTK1 212 aa13.72□□□□□ -0.21
DDX39A-221ENST00000593026 GIN1Q9NXP7 522 aa13.72□□□□□ -0.21
DDX39A-221ENST00000593026 CNOT11Q9UKZ1 510 aaKnown RBP13.72□□□□□ -0.21
DDX39A-221ENST00000593026 NTNG1Q9Y2I2 539 aa13.72□□□□□ -0.21
DDX39A-221ENST00000593026 PCDHGB3Q9Y5G1 929 aa13.72□□□□□ -0.21
DDX39A-221ENST00000593026 FASNP49327 2511 aaKnown RBP13.71□□□□□ -0.21
DDX39A-221ENST00000593026 A0A0G2JMM0 328 aa13.71□□□□□ -0.21
DDX39A-221ENST00000593026 A0A1W2PP18 115 aa13.71□□□□□ -0.21
DDX39A-221ENST00000593026 A0A1W2PPB8 328 aa13.71□□□□□ -0.21
DDX39A-221ENST00000593026 A0A1W2PRS3 328 aa13.71□□□□□ -0.21
DDX39A-221ENST00000593026 ANKRD33BA6NCL7 494 aa13.71□□□□□ -0.21
DDX39A-221ENST00000593026 ASPDHA6ND91 283 aa13.71□□□□□ -0.21
DDX39A-221ENST00000593026 KIR3DP1A8MWS1 328 aa13.71□□□□□ -0.21
DDX39A-221ENST00000593026 SNX3O60493 162 aa13.71□□□□□ -0.21
DDX39A-221ENST00000593026 ZCCHC18P0CG32 403 aa13.71□□□□□ -0.21
DDX39A-221ENST00000593026 CD1EP15812 388 aa13.71□□□□□ -0.21
DDX39A-221ENST00000593026 MATN1P21941 496 aa13.71□□□□□ -0.21
DDX39A-221ENST00000593026 DNASE1L1P49184 302 aa13.71□□□□□ -0.21
DDX39A-221ENST00000593026 MAN2A2P49641 1150 aa13.71□□□□□ -0.21
DDX39A-221ENST00000593026 KCNJ2P63252 427 aa13.71□□□□□ -0.21
DDX39A-221ENST00000593026 POU6F2P78424 691 aaPredicted RBP13.71□□□□□ -0.21
DDX39A-221ENST00000593026 TLE1Q04724 770 aa13.71□□□□□ -0.21
DDX39A-221ENST00000593026 UBAP2LQ14157 1087 aaKnown RBP13.71□□□□□ -0.21
DDX39A-221ENST00000593026 TBCELQ5QJ74 424 aa13.71□□□□□ -0.21
DDX39A-221ENST00000593026 DESI1Q6ICB0 168 aa13.71□□□□□ -0.21
DDX39A-221ENST00000593026 POGLUT1Q8NBL1 392 aa13.71□□□□□ -0.21
DDX39A-221ENST00000593026 OR5D16Q8NGK9 328 aa13.71□□□□□ -0.21
DDX39A-221ENST00000593026 MIPOL1Q8TD10 442 aa13.71□□□□□ -0.21
DDX39A-221ENST00000593026 TSPEARQ8WU66 669 aa13.71□□□□□ -0.21
DDX39A-221ENST00000593026 TMCO6Q96DC7 493 aa13.71□□□□□ -0.21
DDX39A-221ENST00000593026 FRMD6Q96NE9 622 aa13.71□□□□□ -0.21
DDX39A-221ENST00000593026 OR7D2Q96RA2 312 aa13.71□□□□□ -0.21
DDX39A-221ENST00000593026 DOHHQ9BU89 302 aa13.71□□□□□ -0.21
DDX39A-221ENST00000593026 BTBD2Q9BX70 525 aa13.71□□□□□ -0.21
DDX39A-221ENST00000593026 NMUR2Q9GZQ4 415 aa13.71□□□□□ -0.21
DDX39A-221ENST00000593026 SERHL2Q9H4I8 314 aa13.71□□□□□ -0.21
DDX39A-221ENST00000593026 AGPAT4Q9NRZ5 378 aa13.71□□□□□ -0.21
DDX39A-221ENST00000593026 SLC6A13Q9NSD5 602 aa13.71□□□□□ -0.21
DDX39A-221ENST00000593026 ASF1BQ9NVP2 202 aa13.71□□□□□ -0.21
DDX39A-221ENST00000593026 BAHCC1Q9P281 2608 aa13.71□□□□□ -0.22
DDX39A-221ENST00000593026 CFAP46Q8IYW2 2715 aa13.7□□□□□ -0.22
DDX39A-221ENST00000593026 A0A096LPI6 279 aa13.7□□□□□ -0.22
DDX39A-221ENST00000593026 PRAMEF25A6NGN4 478 aa13.7□□□□□ -0.22
DDX39A-221ENST00000593026 DUXAA6NLW8 204 aa13.7□□□□□ -0.22
DDX39A-221ENST00000593026 ANGPT2O15123 496 aa13.7□□□□□ -0.22
DDX39A-221ENST00000593026 HS6ST1O60243 411 aa13.7□□□□□ -0.22
DDX39A-221ENST00000593026 KCNK2O95069 426 aa13.7□□□□□ -0.22
DDX39A-221ENST00000593026 KRT75O95678 551 aa13.7□□□□□ -0.22
DDX39A-221ENST00000593026 IL33O95760 270 aa13.7□□□□□ -0.22
DDX39A-221ENST00000593026 SNRPB2P08579 225 aaKnown RBP13.7□□□□□ -0.22
DDX39A-221ENST00000593026 CYP4B1P13584 511 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms