RNA–Protein interactions for RNA: ENST00000592960.1

PKN1-215, Transcript of protein kinase N1, human

TSL 3

Gene PKN1, Length 677 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKN1-215	ENST00000592960	RUNDC3A	Q59EK9	446 aa		13.92	□□□□□ -0.18
PKN1-215	ENST00000592960	SAMD4B	Q5PRF9	694 aa	Known RBP	13.92	□□□□□ -0.18
PKN1-215	ENST00000592960	MSRB3	Q8IXL7	192 aa		13.92	□□□□□ -0.18
PKN1-215	ENST00000592960	ZNF595	Q8IYB9	648 aa		13.92	□□□□□ -0.18
PKN1-215	ENST00000592960	BEST3	Q8N1M1	668 aa		13.92	□□□□□ -0.18
PKN1-215	ENST00000592960	FBXW8	Q8N3Y1	598 aa		13.92	□□□□□ -0.18
PKN1-215	ENST00000592960	OR8J3	Q8NGG0	315 aa		13.92	□□□□□ -0.18
PKN1-215	ENST00000592960	GOT1L1	Q8NHS2	421 aa	Predicted RBP	13.92	□□□□□ -0.18
PKN1-215	ENST00000592960	M1AP	Q8TC57	530 aa		13.92	□□□□□ -0.18
PKN1-215	ENST00000592960	UTP4	Q969X6	686 aa	Known RBP	13.92	□□□□□ -0.18
PKN1-215	ENST00000592960	TMEM125	Q96AQ2	219 aa		13.92	□□□□□ -0.18
PKN1-215	ENST00000592960	CNRIP1	Q96F85	164 aa	Predicted RBP	13.92	□□□□□ -0.18
PKN1-215	ENST00000592960	FRMD6	Q96NE9	622 aa		13.92	□□□□□ -0.18
PKN1-215	ENST00000592960	SH3GL1	Q99961	368 aa		13.92	□□□□□ -0.18
PKN1-215	ENST00000592960	VKORC1	Q9BQB6	163 aa		13.92	□□□□□ -0.18
PKN1-215	ENST00000592960	UTP23	Q9BRU9	249 aa	Known RBP	13.92	□□□□□ -0.18
PKN1-215	ENST00000592960	RBCK1	Q9BYM8	510 aa		13.92	□□□□□ -0.18
PKN1-215	ENST00000592960	NEUROD4	Q9HD90	331 aa		13.92	□□□□□ -0.18
PKN1-215	ENST00000592960	TAS2R9	Q9NYW1	312 aa		13.92	□□□□□ -0.18
PKN1-215	ENST00000592960	SLC25A37	Q9NYZ2	338 aa		13.92	□□□□□ -0.18
PKN1-215	ENST00000592960	TMEM181	Q9P2C4	612 aa		13.92	□□□□□ -0.18
PKN1-215	ENST00000592960	ABCD2	Q9UBJ2	740 aa		13.92	□□□□□ -0.18
PKN1-215	ENST00000592960	NPIPA5	E9PKD4	350 aa		13.91	□□□□□ -0.18
PKN1-215	ENST00000592960		H0YHG0	523 aa		13.91	□□□□□ -0.18
PKN1-215	ENST00000592960	NME4	O00746	187 aa		13.91	□□□□□ -0.18
PKN1-215	ENST00000592960	CLDN4	O14493	209 aa		13.91	□□□□□ -0.18
PKN1-215	ENST00000592960	PDE5A	O76074	875 aa		13.91	□□□□□ -0.18
PKN1-215	ENST00000592960	SEC24D	O94855	1032 aa	Predicted RBP	13.91	□□□□□ -0.18
PKN1-215	ENST00000592960	FH	P07954	510 aa		13.91	□□□□□ -0.18
PKN1-215	ENST00000592960	ZCCHC18	P0CG32	403 aa		13.91	□□□□□ -0.18
PKN1-215	ENST00000592960	CD46	P15529	392 aa		13.91	□□□□□ -0.18
PKN1-215	ENST00000592960	HOXB9	P17482	250 aa	Predicted RBP	13.91	□□□□□ -0.18
PKN1-215	ENST00000592960	IGFBP2	P18065	325 aa		13.91	□□□□□ -0.18
PKN1-215	ENST00000592960	PTPN6	P29350	595 aa		13.91	□□□□□ -0.18
PKN1-215	ENST00000592960	MPI	P34949	423 aa		13.91	□□□□□ -0.18
PKN1-215	ENST00000592960	GPC1	P35052	558 aa		13.91	□□□□□ -0.18
PKN1-215	ENST00000592960	XCR1	P46094	333 aa		13.91	□□□□□ -0.18
PKN1-215	ENST00000592960	XK	P51811	444 aa		13.91	□□□□□ -0.18
PKN1-215	ENST00000592960	MTPN	P58546	118 aa		13.91	□□□□□ -0.18
PKN1-215	ENST00000592960	FOLH1	Q04609	750 aa		13.91	□□□□□ -0.18
PKN1-215	ENST00000592960	HSPB3	Q12988	150 aa		13.91	□□□□□ -0.18
PKN1-215	ENST00000592960	OR1C1	Q15619	314 aa		13.91	□□□□□ -0.18
PKN1-215	ENST00000592960	CEBPE	Q15744	281 aa		13.91	□□□□□ -0.18
PKN1-215	ENST00000592960	MEP1A	Q16819	746 aa		13.91	□□□□□ -0.18
PKN1-215	ENST00000592960	BTBD16	Q32M84	506 aa		13.91	□□□□□ -0.18
PKN1-215	ENST00000592960	PIGG	Q5H8A4	983 aa		13.91	□□□□□ -0.18
PKN1-215	ENST00000592960	RABL3	Q5HYI8	236 aa		13.91	□□□□□ -0.18
PKN1-215	ENST00000592960	MEX3B	Q6ZN04	569 aa	Known RBP	13.91	□□□□□ -0.18
PKN1-215	ENST00000592960	ZNF551	Q7Z340	670 aa	Predicted RBP	13.91	□□□□□ -0.18
PKN1-215	ENST00000592960	OR4N5	Q8IXE1	308 aa		13.91	□□□□□ -0.18
PKN1-215	ENST00000592960	SLC15A3	Q8IY34	581 aa		13.91	□□□□□ -0.18
PKN1-215	ENST00000592960	CCDC116	Q8IYX3	515 aa		13.91	□□□□□ -0.18
PKN1-215	ENST00000592960	TMEM178A	Q8NBL3	297 aa		13.91	□□□□□ -0.18
PKN1-215	ENST00000592960	TMEM52	Q8NDY8	209 aa		13.91	□□□□□ -0.18
PKN1-215	ENST00000592960	TBC1D20	Q96BZ9	403 aa		13.91	□□□□□ -0.18
PKN1-215	ENST00000592960	AMDHD1	Q96NU7	426 aa		13.91	□□□□□ -0.18
PKN1-215	ENST00000592960	THUMPD3	Q9BV44	507 aa	Known RBP	13.91	□□□□□ -0.18
PKN1-215	ENST00000592960	HES7	Q9BYE0	225 aa		13.91	□□□□□ -0.18
PKN1-215	ENST00000592960	GLIPR2	Q9H4G4	154 aa		13.91	□□□□□ -0.18
PKN1-215	ENST00000592960	MMP25	Q9NPA2	562 aa		13.91	□□□□□ -0.18
PKN1-215	ENST00000592960	PRTFDC1	Q9NRG1	225 aa		13.91	□□□□□ -0.18
PKN1-215	ENST00000592960	SLC6A13	Q9NSD5	602 aa		13.91	□□□□□ -0.18
PKN1-215	ENST00000592960	CMTM6	Q9NX76	183 aa		13.91	□□□□□ -0.18
PKN1-215	ENST00000592960	C19orf25	Q9UFG5	118 aa	Predicted RBP	13.91	□□□□□ -0.18
PKN1-215	ENST00000592960	PACSIN3	Q9UKS6	424 aa		13.91	□□□□□ -0.18
PKN1-215	ENST00000592960	NPIPA1	Q9UND3	350 aa		13.91	□□□□□ -0.18
PKN1-215	ENST00000592960	AP3M1	Q9Y2T2	418 aa		13.91	□□□□□ -0.18
PKN1-215	ENST00000592960	SNX8	Q9Y5X2	465 aa		13.91	□□□□□ -0.18
PKN1-215	ENST00000592960	IGHV3-20	A0A0C4DH32	117 aa		13.9	□□□□□ -0.18
PKN1-215	ENST00000592960	EVPLL	A8MZ36	301 aa		13.9	□□□□□ -0.18
PKN1-215	ENST00000592960	FGF17	O60258	216 aa		13.9	□□□□□ -0.18
PKN1-215	ENST00000592960	B4GALT2	O60909	372 aa		13.9	□□□□□ -0.18
PKN1-215	ENST00000592960	LDB3	O75112	727 aa		13.9	□□□□□ -0.18
PKN1-215	ENST00000592960	NEURL1	O76050	574 aa		13.9	□□□□□ -0.18
PKN1-215	ENST00000592960	GPR75	O95800	540 aa		13.9	□□□□□ -0.18
PKN1-215	ENST00000592960	SP1	P08047	785 aa		13.9	□□□□□ -0.18
PKN1-215	ENST00000592960	CPM	P14384	443 aa		13.9	□□□□□ -0.18
PKN1-215	ENST00000592960	POR	P16435	677 aa	Predicted RBP	13.9	□□□□□ -0.18
PKN1-215	ENST00000592960	IL10	P22301	178 aa		13.9	□□□□□ -0.18
PKN1-215	ENST00000592960	UQCRC2	P22695	453 aa		13.9	□□□□□ -0.18
PKN1-215	ENST00000592960	PPIB	P23284	216 aa	Known RBP	13.9	□□□□□ -0.18
PKN1-215	ENST00000592960	ME2	P23368	584 aa		13.9	□□□□□ -0.18
PKN1-215	ENST00000592960	EEFSEC	P57772	596 aa	Known RBP	13.9	□□□□□ -0.18
PKN1-215	ENST00000592960	ID2	Q02363	134 aa		13.9	□□□□□ -0.18
PKN1-215	ENST00000592960	SLC13A2	Q13183	592 aa		13.9	□□□□□ -0.18
PKN1-215	ENST00000592960	GAB1	Q13480	694 aa		13.9	□□□□□ -0.18
PKN1-215	ENST00000592960	SELPLG	Q14242	412 aa		13.9	□□□□□ -0.18
PKN1-215	ENST00000592960	EXT1	Q16394	746 aa		13.9	□□□□□ -0.18
PKN1-215	ENST00000592960	ZNF750	Q32MQ0	723 aa		13.9	□□□□□ -0.18
PKN1-215	ENST00000592960	SPDYE7P	Q495Y7	208 aa		13.9	□□□□□ -0.18
PKN1-215	ENST00000592960	SPATS1	Q496A3	300 aa		13.9	□□□□□ -0.18
PKN1-215	ENST00000592960	C6orf163	Q5TEZ5	329 aa		13.9	□□□□□ -0.18
PKN1-215	ENST00000592960	FCRLB	Q6BAA4	426 aa		13.9	□□□□□ -0.18
PKN1-215	ENST00000592960	SPINK14	Q6IE38	97 aa		13.9	□□□□□ -0.18
PKN1-215	ENST00000592960	PGM2L1	Q6PCE3	622 aa		13.9	□□□□□ -0.18
PKN1-215	ENST00000592960	GHDC	Q8N2G8	530 aa		13.9	□□□□□ -0.18
PKN1-215	ENST00000592960	LRRC25	Q8N386	305 aa	Predicted RBP	13.9	□□□□□ -0.18
PKN1-215	ENST00000592960	RNF148	Q8N7C7	305 aa		13.9	□□□□□ -0.18
PKN1-215	ENST00000592960	AURKB	Q96GD4	344 aa	Predicted RBP	13.9	□□□□□ -0.18
PKN1-215	ENST00000592960	ZNF681	Q96N22	645 aa		13.9	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms