RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 GFAPP14136 432 aa8.64□□□□□ -1.03
BRCA1-226ENST00000591534 EPORP19235 508 aa8.64□□□□□ -1.03
BRCA1-226ENST00000591534 CD22P20273 847 aa8.64□□□□□ -1.03
BRCA1-226ENST00000591534 CEACAM8P31997 349 aaPredicted RBP8.64□□□□□ -1.03
BRCA1-226ENST00000591534 ETV4P43268 484 aa8.64□□□□□ -1.03
BRCA1-226ENST00000591534 TRPC1P48995 793 aa8.64□□□□□ -1.03
BRCA1-226ENST00000591534 NR0B1P51843 470 aaKnown RBP8.64□□□□□ -1.03
BRCA1-226ENST00000591534 HERVK_113P63132 956 aa8.64□□□□□ -1.03
BRCA1-226ENST00000591534 ERVK-8P63133 956 aa8.64□□□□□ -1.03
BRCA1-226ENST00000591534 EEF1A1P68104 462 aaKnown RBP8.64□□□□□ -1.03
BRCA1-226ENST00000591534 SORDQ00796 357 aa8.64□□□□□ -1.03
BRCA1-226ENST00000591534 DUSP8Q13202 625 aa8.64□□□□□ -1.03
BRCA1-226ENST00000591534 DDX39BQ13838 428 aaKnown RBP8.64□□□□□ -1.03
BRCA1-226ENST00000591534 RCAN2Q14206 197 aa8.64□□□□□ -1.03
BRCA1-226ENST00000591534 E2F2Q14209 437 aa8.64□□□□□ -1.03
BRCA1-226ENST00000591534 RPS6KA2Q15349 733 aa8.64□□□□□ -1.03
BRCA1-226ENST00000591534 TOMM20Q15388 145 aa8.64□□□□□ -1.03
BRCA1-226ENST00000591534 FXNQ16595 210 aa8.64□□□□□ -1.03
BRCA1-226ENST00000591534 NTRK2Q16620 822 aa8.64□□□□□ -1.03
BRCA1-226ENST00000591534 ACSF3Q4G176 576 aaPredicted RBP8.64□□□□□ -1.03
BRCA1-226ENST00000591534 EEF1A1P5Q5VTE0 462 aa8.64□□□□□ -1.03
BRCA1-226ENST00000591534 LIPJQ5W064 366 aa8.64□□□□□ -1.03
BRCA1-226ENST00000591534 FAM219BQ5XKK7 198 aa8.64□□□□□ -1.03
BRCA1-226ENST00000591534 ANKRD34AQ69YU3 496 aa8.64□□□□□ -1.03
BRCA1-226ENST00000591534 CDC20BQ86Y33 519 aa8.64□□□□□ -1.03
BRCA1-226ENST00000591534 MYLK4Q86YV6 388 aaPredicted RBP8.64□□□□□ -1.03
BRCA1-226ENST00000591534 CENPLQ8N0S6 344 aaPredicted RBP8.64□□□□□ -1.03
BRCA1-226ENST00000591534 OR10G3Q8NGC4 313 aa8.64□□□□□ -1.03
BRCA1-226ENST00000591534 KCTD4Q8WVF5 259 aa8.64□□□□□ -1.03
BRCA1-226ENST00000591534 PPWD1Q96BP3 646 aaKnown RBP8.64□□□□□ -1.03
BRCA1-226ENST00000591534 NXNL1Q96CM4 212 aa8.64□□□□□ -1.03
BRCA1-226ENST00000591534 YIPF4Q9BSR8 244 aa8.64□□□□□ -1.03
BRCA1-226ENST00000591534 ERVK-6Q9BXR3 956 aa8.64□□□□□ -1.03
BRCA1-226ENST00000591534 FAM107BQ9H098 131 aa8.64□□□□□ -1.03
BRCA1-226ENST00000591534 OR51B5Q9H339 312 aa8.64□□□□□ -1.03
BRCA1-226ENST00000591534 ALG9Q9H6U8 611 aa8.64□□□□□ -1.03
BRCA1-226ENST00000591534 ACTR8Q9H981 624 aa8.64□□□□□ -1.03
BRCA1-226ENST00000591534 SEMA4BQ9NPR2 832 aaPredicted RBP8.64□□□□□ -1.03
BRCA1-226ENST00000591534 KLHL14Q9P2G3 628 aa8.64□□□□□ -1.03
BRCA1-226ENST00000591534 ERVK-19Q9WJR5 959 aa8.64□□□□□ -1.03
BRCA1-226ENST00000591534 CFL2Q9Y281 166 aa8.64□□□□□ -1.03
BRCA1-226ENST00000591534 PLEKHA6Q9Y2H5 1048 aa8.64□□□□□ -1.03
BRCA1-226ENST00000591534 TSC22D4Q9Y3Q8 395 aa8.64□□□□□ -1.03
BRCA1-226ENST00000591534 CHCHD2Q9Y6H1 151 aaPredicted RBP8.64□□□□□ -1.03
BRCA1-226ENST00000591534 MED13LQ71F56 2210 aa8.64□□□□□ -1.03
BRCA1-226ENST00000591534 SPG11Q96JI7 2443 aa8.63□□□□□ -1.03
BRCA1-226ENST00000591534 ITPR3Q14573 2671 aa8.63□□□□□ -1.03
BRCA1-226ENST00000591534 LRRC14BA6NHZ5 514 aa8.63□□□□□ -1.03
BRCA1-226ENST00000591534 CD8B2A6NJW9 211 aa8.63□□□□□ -1.03
BRCA1-226ENST00000591534 UBXN8O00124 270 aa8.63□□□□□ -1.03
BRCA1-226ENST00000591534 CASKO14936 926 aa8.63□□□□□ -1.03
BRCA1-226ENST00000591534 UGDHO60701 494 aa8.63□□□□□ -1.03
BRCA1-226ENST00000591534 ZNF354AO60765 605 aaPredicted RBP8.63□□□□□ -1.03
BRCA1-226ENST00000591534 SH3BGRLO75368 114 aa8.63□□□□□ -1.03
BRCA1-226ENST00000591534 TRIM3O75382 744 aaPredicted RBP8.63□□□□□ -1.03
BRCA1-226ENST00000591534 ERN1O75460 977 aaKnown RBP8.63□□□□□ -1.03
BRCA1-226ENST00000591534 IL18BPO95998 194 aa8.63□□□□□ -1.03
BRCA1-226ENST00000591534 HPNP05981 417 aa8.63□□□□□ -1.03
BRCA1-226ENST00000591534 NR2F6P10588 404 aa8.63□□□□□ -1.03
BRCA1-226ENST00000591534 IMPDH1P20839 514 aa8.63□□□□□ -1.03
BRCA1-226ENST00000591534 ENDOUP21128 410 aaKnown RBP8.63□□□□□ -1.03
BRCA1-226ENST00000591534 CTSSP25774 331 aa8.63□□□□□ -1.03
BRCA1-226ENST00000591534 PIK3R1P27986 724 aa8.63□□□□□ -1.03
BRCA1-226ENST00000591534 SLC37A1P57057 533 aa8.63□□□□□ -1.03
BRCA1-226ENST00000591534 GUCY1A3Q02108 690 aa8.63□□□□□ -1.03
BRCA1-226ENST00000591534 CUL3Q13618 768 aa8.63□□□□□ -1.03
BRCA1-226ENST00000591534 EBPQ15125 230 aaKnown RBP8.63□□□□□ -1.03
BRCA1-226ENST00000591534 TECRLQ5HYJ1 363 aa8.63□□□□□ -1.03
BRCA1-226ENST00000591534 NHSL2Q5HYW2 709 aa8.63□□□□□ -1.03
BRCA1-226ENST00000591534 NSUN5P2Q63ZY6 315 aa8.63□□□□□ -1.03
BRCA1-226ENST00000591534 PAMR1Q6UXH9 720 aa8.63□□□□□ -1.03
BRCA1-226ENST00000591534 ISCA2Q86U28 154 aa8.63□□□□□ -1.03
BRCA1-226ENST00000591534 BIVMQ86UB2 503 aa8.63□□□□□ -1.03
BRCA1-226ENST00000591534 JAZF1Q86VZ6 243 aa8.63□□□□□ -1.03
BRCA1-226ENST00000591534 MRPL41Q8IXM3 137 aaKnown RBP8.63□□□□□ -1.03
BRCA1-226ENST00000591534 PLD6Q8N2A8 252 aaKnown RBP8.63□□□□□ -1.03
BRCA1-226ENST00000591534 HUS1BQ8NHY5 278 aa8.63□□□□□ -1.03
BRCA1-226ENST00000591534 MGARPQ8TDB4 240 aa8.63□□□□□ -1.03
BRCA1-226ENST00000591534 UBTD2Q8WUN7 234 aa8.63□□□□□ -1.03
BRCA1-226ENST00000591534 FBLIM1Q8WUP2 373 aa8.63□□□□□ -1.03
BRCA1-226ENST00000591534 ZNF75CPQ92670 426 aaPredicted RBP8.63□□□□□ -1.03
BRCA1-226ENST00000591534 L3HYPDHQ96EM0 354 aa8.63□□□□□ -1.03
BRCA1-226ENST00000591534 ZFP3Q96NJ6 502 aa8.63□□□□□ -1.03
BRCA1-226ENST00000591534 ATOH8Q96SQ7 321 aa8.63□□□□□ -1.03
BRCA1-226ENST00000591534 TIMP4Q99727 224 aa8.63□□□□□ -1.03
BRCA1-226ENST00000591534 PRDM14Q9GZV8 571 aa8.63□□□□□ -1.03
BRCA1-226ENST00000591534 SLC6A15Q9H2J7 730 aa8.63□□□□□ -1.03
BRCA1-226ENST00000591534 CALHM2Q9HA72 323 aa8.63□□□□□ -1.03
BRCA1-226ENST00000591534 AHSPQ9NZD4 102 aa8.63□□□□□ -1.03
BRCA1-226ENST00000591534 XPR1Q9UBH6 696 aa8.63□□□□□ -1.03
BRCA1-226ENST00000591534 CNOT11Q9UKZ1 510 aaKnown RBP8.63□□□□□ -1.03
BRCA1-226ENST00000591534 CBLCQ9ULV8 474 aa8.63□□□□□ -1.03
BRCA1-226ENST00000591534 CAMK2AQ9UQM7 478 aa8.63□□□□□ -1.03
BRCA1-226ENST00000591534 NPFFR2Q9Y5X5 522 aa8.63□□□□□ -1.03
BRCA1-226ENST00000591534 LRRC3CA6NJW4 275 aa8.62□□□□□ -1.03
BRCA1-226ENST00000591534 EEF1E1-BLOC1S5C9J1V9 151 aa8.62□□□□□ -1.03
BRCA1-226ENST00000591534 H0YIV9 168 aa8.62□□□□□ -1.03
BRCA1-226ENST00000591534 PLPP1O14494 284 aa8.62□□□□□ -1.03
BRCA1-226ENST00000591534 ARHGEF9O43307 516 aa8.62□□□□□ -1.03
BRCA1-226ENST00000591534 EEF1E1O43324 174 aaKnown RBP8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms