RNA–Protein interactions for RNA: ENST00000590334.5

APOC1-206, Transcript of apolipoprotein C1, humanhuman

TSL 5

Gene APOC1, Length 508 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-206ENST00000590334 BTBD2Q9BX70 525 aa11.12□□□□□ -0.63
APOC1-206ENST00000590334 KAT8Q9H7Z6 458 aaKnown RBP11.12□□□□□ -0.63
APOC1-206ENST00000590334 ZBTB20Q9HC78 741 aaPredicted RBP11.12□□□□□ -0.63
APOC1-206ENST00000590334 THUMPD1Q9NXG2 353 aaKnown RBP11.12□□□□□ -0.63
APOC1-206ENST00000590334 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.12□□□□□ -0.63
APOC1-206ENST00000590334 CBLCQ9ULV8 474 aa11.12□□□□□ -0.63
APOC1-206ENST00000590334 ZNF451Q9Y4E5 1061 aa11.12□□□□□ -0.63
APOC1-206ENST00000590334 KCNE3Q9Y6H6 103 aa11.12□□□□□ -0.63
APOC1-206ENST00000590334 BSNQ9UPA5 3926 aa11.11□□□□□ -0.63
APOC1-206ENST00000590334 C15orf38-AP3S2A0A0A6YYH1 394 aa11.11□□□□□ -0.63
APOC1-206ENST00000590334 GXYLT2A0PJZ3 443 aa11.11□□□□□ -0.63
APOC1-206ENST00000590334 OR6C70A6NIJ9 312 aa11.11□□□□□ -0.63
APOC1-206ENST00000590334 A8MVJ9 347 aa11.11□□□□□ -0.63
APOC1-206ENST00000590334 ABCB7O75027 752 aa11.11□□□□□ -0.63
APOC1-206ENST00000590334 TNFRSF21O75509 655 aa11.11□□□□□ -0.63
APOC1-206ENST00000590334 PPM1BO75688 479 aa11.11□□□□□ -0.63
APOC1-206ENST00000590334 UBOX5O94941 541 aa11.11□□□□□ -0.63
APOC1-206ENST00000590334 OR6B1O95007 311 aa11.11□□□□□ -0.63
APOC1-206ENST00000590334 KCNK2O95069 426 aa11.11□□□□□ -0.63
APOC1-206ENST00000590334 IL33O95760 270 aa11.11□□□□□ -0.63
APOC1-206ENST00000590334 WDPCPO95876 746 aa11.11□□□□□ -0.63
APOC1-206ENST00000590334 AK1P00568 194 aa11.11□□□□□ -0.63
APOC1-206ENST00000590334 OR12D1P0DN82 309 aa11.11□□□□□ -0.63
APOC1-206ENST00000590334 ETFAP13804 333 aa11.11□□□□□ -0.63
APOC1-206ENST00000590334 LCN1P31025 176 aa11.11□□□□□ -0.63
APOC1-206ENST00000590334 SOX3P41225 446 aa11.11□□□□□ -0.63
APOC1-206ENST00000590334 CRATP43155 626 aa11.11□□□□□ -0.63
APOC1-206ENST00000590334 CPA2P48052 419 aa11.11□□□□□ -0.63
APOC1-206ENST00000590334 TMED10P49755 219 aaKnown RBP11.11□□□□□ -0.63
APOC1-206ENST00000590334 PNLIPRP2P54317 469 aa11.11□□□□□ -0.63
APOC1-206ENST00000590334 CASP9P55211 416 aa11.11□□□□□ -0.63
APOC1-206ENST00000590334 MTPNP58546 118 aa11.11□□□□□ -0.63
APOC1-206ENST00000590334 POU6F2P78424 691 aaPredicted RBP11.11□□□□□ -0.63
APOC1-206ENST00000590334 TUBA3CQ13748 450 aa11.11□□□□□ -0.63
APOC1-206ENST00000590334 SELPLGQ14242 412 aa11.11□□□□□ -0.63
APOC1-206ENST00000590334 DECR1Q16698 335 aa11.11□□□□□ -0.63
APOC1-206ENST00000590334 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.11□□□□□ -0.63
APOC1-206ENST00000590334 ZNF468Q5VIY5 522 aaPredicted RBP11.11□□□□□ -0.63
APOC1-206ENST00000590334 TNFAIP8L2Q6P589 184 aaPredicted RBP11.11□□□□□ -0.63
APOC1-206ENST00000590334 TUBA3EQ6PEY2 450 aa11.11□□□□□ -0.63
APOC1-206ENST00000590334 LINC00696Q6ZRV3 163 aa11.11□□□□□ -0.63
APOC1-206ENST00000590334 ARPINQ7Z6K5 226 aa11.11□□□□□ -0.63
APOC1-206ENST00000590334 ZNF227Q86WZ6 799 aa11.11□□□□□ -0.63
APOC1-206ENST00000590334 C10orf111Q8N326 155 aa11.11□□□□□ -0.63
APOC1-206ENST00000590334 TMEM156Q8N614 296 aa11.11□□□□□ -0.63
APOC1-206ENST00000590334 BCORP1Q8N888 145 aa11.11□□□□□ -0.63
APOC1-206ENST00000590334 COX18Q8N8Q8 333 aa11.11□□□□□ -0.63
APOC1-206ENST00000590334 FBXO30Q8TB52 745 aa11.11□□□□□ -0.63
APOC1-206ENST00000590334 ASB15Q8WXK1 588 aa11.11□□□□□ -0.63
APOC1-206ENST00000590334 JADE3Q92613 823 aa11.11□□□□□ -0.63
APOC1-206ENST00000590334 DIO2Q92813 273 aa11.11□□□□□ -0.63
APOC1-206ENST00000590334 TMBIM1Q969X1 311 aa11.11□□□□□ -0.63
APOC1-206ENST00000590334 TMEM125Q96AQ2 219 aa11.11□□□□□ -0.63
APOC1-206ENST00000590334 SPACA9Q96E40 222 aaPredicted RBP11.11□□□□□ -0.63
APOC1-206ENST00000590334 OMA1Q96E52 524 aa11.11□□□□□ -0.63
APOC1-206ENST00000590334 OTUB1Q96FW1 271 aaPredicted RBP11.11□□□□□ -0.63
APOC1-206ENST00000590334 ABHD17AQ96GS6 310 aa11.11□□□□□ -0.63
APOC1-206ENST00000590334 UTP23Q9BRU9 249 aaKnown RBP11.11□□□□□ -0.63
APOC1-206ENST00000590334 SH2D2AQ9NP31 389 aa11.11□□□□□ -0.63
APOC1-206ENST00000590334 EXD2Q9NVH0 621 aa11.11□□□□□ -0.63
APOC1-206ENST00000590334 MRTO4Q9UKD2 239 aaKnown RBP11.11□□□□□ -0.63
APOC1-206ENST00000590334 LIPT1Q9Y234 373 aa11.11□□□□□ -0.63
APOC1-206ENST00000590334 AP3M1Q9Y2T2 418 aa11.11□□□□□ -0.63
APOC1-206ENST00000590334 OR10H1Q9Y4A9 318 aa11.11□□□□□ -0.63
APOC1-206ENST00000590334 PRAMEF27A3QJZ7 478 aa11.1□□□□□ -0.63
APOC1-206ENST00000590334 OR5H15A6NDH6 313 aa11.1□□□□□ -0.63
APOC1-206ENST00000590334 ERVH48-1M5A8F1 160 aa11.1□□□□□ -0.63
APOC1-206ENST00000590334 NEURL1O76050 574 aa11.1□□□□□ -0.63
APOC1-206ENST00000590334 IGKV1D-16P01601 117 aa11.1□□□□□ -0.63
APOC1-206ENST00000590334 CPOXP36551 454 aa11.1□□□□□ -0.63
APOC1-206ENST00000590334 CD96P40200 585 aa11.1□□□□□ -0.63
APOC1-206ENST00000590334 CYB561P49447 251 aa11.1□□□□□ -0.63
APOC1-206ENST00000590334 GZMMP51124 257 aa11.1□□□□□ -0.63
APOC1-206ENST00000590334 PSMD4P55036 377 aaKnown RBP11.1□□□□□ -0.63
APOC1-206ENST00000590334 DSTNP60981 165 aa11.1□□□□□ -0.63
APOC1-206ENST00000590334 PLCXD2Q0VAA5 305 aa11.1□□□□□ -0.63
APOC1-206ENST00000590334 FUT5Q11128 374 aa11.1□□□□□ -0.63
APOC1-206ENST00000590334 BNIP1Q12981 228 aa11.1□□□□□ -0.63
APOC1-206ENST00000590334 ADRM1Q16186 407 aa11.1□□□□□ -0.63
APOC1-206ENST00000590334 RABL3Q5HYI8 236 aa11.1□□□□□ -0.63
APOC1-206ENST00000590334 DCST2Q5T1A1 773 aa11.1□□□□□ -0.63
APOC1-206ENST00000590334 ATAD3BQ5T9A4 648 aa11.1□□□□□ -0.63
APOC1-206ENST00000590334 TMEM81Q6P7N7 255 aa11.1□□□□□ -0.63
APOC1-206ENST00000590334 IL20RBQ6UXL0 311 aa11.1□□□□□ -0.63
APOC1-206ENST00000590334 NUP54Q7Z3B4 507 aa11.1□□□□□ -0.63
APOC1-206ENST00000590334 NET1Q7Z628 596 aaPredicted RBP11.1□□□□□ -0.63
APOC1-206ENST00000590334 SERPINA11Q86U17 422 aa11.1□□□□□ -0.63
APOC1-206ENST00000590334 CALHM3Q86XJ0 350 aa11.1□□□□□ -0.63
APOC1-206ENST00000590334 PRR22Q8IZ63 422 aa11.1□□□□□ -0.63
APOC1-206ENST00000590334 GOLM1Q8NBJ4 401 aa11.1□□□□□ -0.63
APOC1-206ENST00000590334 MDS2Q8NDY4 140 aa11.1□□□□□ -0.63
APOC1-206ENST00000590334 FBXO27Q8NI29 283 aa11.1□□□□□ -0.63
APOC1-206ENST00000590334 RNF138Q8WVD3 245 aa11.1□□□□□ -0.63
APOC1-206ENST00000590334 XAGE5Q8WWM1 108 aa11.1□□□□□ -0.63
APOC1-206ENST00000590334 TM9SF4Q92544 642 aa11.1□□□□□ -0.63
APOC1-206ENST00000590334 RAB8BQ92930 207 aa11.1□□□□□ -0.63
APOC1-206ENST00000590334 HGDQ93099 445 aa11.1□□□□□ -0.63
APOC1-206ENST00000590334 NTNG2Q96CW9 530 aa11.1□□□□□ -0.63
APOC1-206ENST00000590334 WBP1Q96G27 269 aa11.1□□□□□ -0.63
APOC1-206ENST00000590334 RMND5BQ96G75 393 aaPredicted RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms