RNA–Protein interactions for RNA: ENST00000589940.5

CXXC1-212, Transcript of CXXC finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene CXXC1, Length 2,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-212ENST00000589940 CT45A9P0DMV2 189 aa16.18■□□□□ 0.18
CXXC1-212ENST00000589940 ATP6AP1Q15904 470 aa16.18■□□□□ 0.18
CXXC1-212ENST00000589940 DUSP7Q16829 419 aa16.18■□□□□ 0.18
CXXC1-212ENST00000589940 CT45A2Q5DJT8 189 aa16.18■□□□□ 0.18
CXXC1-212ENST00000589940 NPSR1Q6W5P4 371 aa16.18■□□□□ 0.18
CXXC1-212ENST00000589940 FRRS1Q6ZNA5 592 aa16.18■□□□□ 0.18
CXXC1-212ENST00000589940 AMIGO2Q86SJ2 522 aa16.18■□□□□ 0.18
CXXC1-212ENST00000589940 OR2Y1Q8NGV0 311 aa16.18■□□□□ 0.18
CXXC1-212ENST00000589940 BTBD9Q96Q07 612 aa16.18■□□□□ 0.18
CXXC1-212ENST00000589940 MESP1Q9BRJ9 268 aa16.18■□□□□ 0.18
CXXC1-212ENST00000589940 NUDT9Q9BW91 350 aa16.18■□□□□ 0.18
CXXC1-212ENST00000589940 B3GNT4Q9C0J1 378 aa16.18■□□□□ 0.18
CXXC1-212ENST00000589940 SEMA6AQ9H2E6 1030 aa16.18■□□□□ 0.18
CXXC1-212ENST00000589940 Q9N2J8 555 aa16.18■□□□□ 0.18
CXXC1-212ENST00000589940 BAG5Q9UL15 447 aa16.18■□□□□ 0.18
CXXC1-212ENST00000589940 PTRH2Q9Y3E5 179 aaKnown RBP16.18■□□□□ 0.18
CXXC1-212ENST00000589940 WDR45Q9Y484 360 aa16.18■□□□□ 0.18
CXXC1-212ENST00000589940 SAGE2PA6NJ88 616 aa16.18■□□□□ 0.18
CXXC1-212ENST00000589940 STX11O75558 287 aa16.18■□□□□ 0.18
CXXC1-212ENST00000589940 TNFSF15O95150 251 aa16.18■□□□□ 0.18
CXXC1-212ENST00000589940 CD247P20963 164 aa16.18■□□□□ 0.18
CXXC1-212ENST00000589940 TRHRP34981 398 aaPredicted RBP16.18■□□□□ 0.18
CXXC1-212ENST00000589940 IFI44LQ53G44 452 aa16.18■□□□□ 0.18
CXXC1-212ENST00000589940 CCNJQ5T5M9 372 aa16.18■□□□□ 0.18
CXXC1-212ENST00000589940 TYW3Q6IPR3 259 aaKnown RBP16.18■□□□□ 0.18
CXXC1-212ENST00000589940 CPEB2Q7Z5Q1 589 aaKnown RBP16.18■□□□□ 0.18
CXXC1-212ENST00000589940 ZDHHC21Q8IVQ6 265 aa16.18■□□□□ 0.18
CXXC1-212ENST00000589940 RMND5BQ96G75 393 aaPredicted RBP16.18■□□□□ 0.18
CXXC1-212ENST00000589940 CENPNQ96H22 339 aaPredicted RBP16.18■□□□□ 0.18
CXXC1-212ENST00000589940 GPR55Q9Y2T6 319 aaPredicted RBP16.18■□□□□ 0.18
CXXC1-212ENST00000589940 FAM149AA5PLN7 773 aa16.17■□□□□ 0.18
CXXC1-212ENST00000589940 SLC30A4O14863 429 aa16.17■□□□□ 0.18
CXXC1-212ENST00000589940 KCNK2O95069 426 aa16.17■□□□□ 0.18
CXXC1-212ENST00000589940 LDLRP01130 860 aa16.17■□□□□ 0.18
CXXC1-212ENST00000589940 FABP3P05413 133 aa16.17■□□□□ 0.18
CXXC1-212ENST00000589940 UMODP07911 640 aa16.17■□□□□ 0.18
CXXC1-212ENST00000589940 PTPRZ1P23471 2315 aaPredicted RBP16.17■□□□□ 0.18
CXXC1-212ENST00000589940 GPR143P51810 404 aa16.17■□□□□ 0.18
CXXC1-212ENST00000589940 FAM69BQ5VUD6 431 aa16.17■□□□□ 0.18
CXXC1-212ENST00000589940 SPPL2AQ8TCT8 520 aa16.17■□□□□ 0.18
CXXC1-212ENST00000589940 GEMIN6Q8WXD5 167 aaKnown RBP16.17■□□□□ 0.18
CXXC1-212ENST00000589940 LPAR4Q99677 370 aa16.17■□□□□ 0.18
CXXC1-212ENST00000589940 WDR77Q9BQA1 342 aaPredicted RBP16.17■□□□□ 0.18
CXXC1-212ENST00000589940 MTHFD2LQ9H903 347 aaPredicted RBP16.17■□□□□ 0.18
CXXC1-212ENST00000589940 MKLN1Q9UL63 735 aa16.17■□□□□ 0.18
CXXC1-212ENST00000589940 PPIEQ9UNP9 301 aaKnown RBP16.17■□□□□ 0.18
CXXC1-212ENST00000589940 PADI2Q9Y2J8 665 aa16.17■□□□□ 0.18
CXXC1-212ENST00000589940 CCDC88CQ9P219 2028 aa16.17■□□□□ 0.18
CXXC1-212ENST00000589940 OR6C76A6NM76 312 aa16.17■□□□□ 0.18
CXXC1-212ENST00000589940 CLOCKO15516 846 aa16.17■□□□□ 0.18
CXXC1-212ENST00000589940 DEAF1O75398 565 aaPredicted RBP16.17■□□□□ 0.18
CXXC1-212ENST00000589940 ALPPP05187 535 aa16.17■□□□□ 0.18
CXXC1-212ENST00000589940 PEX2P28328 305 aa16.17■□□□□ 0.18
CXXC1-212ENST00000589940 VHLP40337 213 aa16.17■□□□□ 0.18
CXXC1-212ENST00000589940 PPICP45877 212 aa16.17■□□□□ 0.18
CXXC1-212ENST00000589940 KCNJ5P48544 419 aa16.17■□□□□ 0.18
CXXC1-212ENST00000589940 VLDLRP98155 873 aa16.17■□□□□ 0.18
CXXC1-212ENST00000589940 PAPD4Q6PIY7 484 aaKnown RBP16.17■□□□□ 0.18
CXXC1-212ENST00000589940 ESX1Q8N693 406 aa16.17■□□□□ 0.18
CXXC1-212ENST00000589940 NFAM1Q8NET5 270 aaPredicted RBP16.17■□□□□ 0.18
CXXC1-212ENST00000589940 B3GNT7Q8NFL0 401 aa16.17■□□□□ 0.18
CXXC1-212ENST00000589940 GPR32P1Q8NGA4 272 aa16.17■□□□□ 0.18
CXXC1-212ENST00000589940 C7orf34Q96L11 122 aa16.17■□□□□ 0.18
CXXC1-212ENST00000589940 RSPO3Q9BXY4 272 aaPredicted RBP16.17■□□□□ 0.18
CXXC1-212ENST00000589940 SAP130Q9H0E3 1048 aa16.17■□□□□ 0.18
CXXC1-212ENST00000589940 QRSL1Q9H0R6 528 aaKnown RBP16.17■□□□□ 0.18
CXXC1-212ENST00000589940 POLE3Q9NRF9 147 aa16.17■□□□□ 0.18
CXXC1-212ENST00000589940 FESP07332 822 aa16.16■□□□□ 0.18
CXXC1-212ENST00000589940 GUSBP08236 651 aa16.16■□□□□ 0.18
CXXC1-212ENST00000589940 RAB40ALP0C0E4 278 aa16.16■□□□□ 0.18
CXXC1-212ENST00000589940 FOLR3P41439 243 aa16.16■□□□□ 0.18
CXXC1-212ENST00000589940 NNATQ16517 81 aa16.16■□□□□ 0.18
CXXC1-212ENST00000589940 OGFRL1Q5TC84 451 aaPredicted RBP16.16■□□□□ 0.18
CXXC1-212ENST00000589940 AP1ARQ63HQ0 302 aa16.16■□□□□ 0.18
CXXC1-212ENST00000589940 LPCAT4Q643R3 524 aa16.16■□□□□ 0.18
CXXC1-212ENST00000589940 FIGNL1Q6PIW4 674 aa16.16■□□□□ 0.18
CXXC1-212ENST00000589940 PIWIL3Q7Z3Z3 882 aaKnown RBP16.16■□□□□ 0.18
CXXC1-212ENST00000589940 C9orf40Q8IXQ3 194 aa16.16■□□□□ 0.18
CXXC1-212ENST00000589940 OR4N2Q8NGD1 307 aa16.16■□□□□ 0.18
CXXC1-212ENST00000589940 CT55Q8WUE5 264 aa16.16■□□□□ 0.18
CXXC1-212ENST00000589940 PROX1Q92786 737 aa16.16■□□□□ 0.18
CXXC1-212ENST00000589940 PMM1Q92871 262 aa16.16■□□□□ 0.18
CXXC1-212ENST00000589940 C8orf44Q96CB5 159 aa16.16■□□□□ 0.18
CXXC1-212ENST00000589940 ZG16BQ96DA0 208 aa16.16■□□□□ 0.18
CXXC1-212ENST00000589940 SH3GLB1Q9Y371 365 aa16.16■□□□□ 0.18
CXXC1-212ENST00000589940 OR10H1Q9Y4A9 318 aa16.16■□□□□ 0.18
CXXC1-212ENST00000589940 LOC102723996A0A087X1L8 192 aa16.15■□□□□ 0.18
CXXC1-212ENST00000589940 PCDH17O14917 1159 aa16.15■□□□□ 0.18
CXXC1-212ENST00000589940 KIAA0513O60268 411 aa16.15■□□□□ 0.18
CXXC1-212ENST00000589940 SLC34A2O95436 690 aa16.15■□□□□ 0.18
CXXC1-212ENST00000589940 CST1P01037 141 aa16.15■□□□□ 0.18
CXXC1-212ENST00000589940 PABPC4LP0CB38 370 aaKnown RBP16.15■□□□□ 0.18
CXXC1-212ENST00000589940 TCN2P20062 427 aa16.15■□□□□ 0.18
CXXC1-212ENST00000589940 PIGAP37287 484 aa16.15■□□□□ 0.18
CXXC1-212ENST00000589940 DCAF7P61962 342 aa16.15■□□□□ 0.18
CXXC1-212ENST00000589940 EBPQ15125 230 aaKnown RBP16.15■□□□□ 0.18
CXXC1-212ENST00000589940 CYP27C1Q4G0S4 372 aa16.15■□□□□ 0.18
CXXC1-212ENST00000589940 SLC29A4Q7RTT9 530 aa16.15■□□□□ 0.18
CXXC1-212ENST00000589940 ZNF619Q8N2I2 560 aa16.15■□□□□ 0.18
CXXC1-212ENST00000589940 ZSCAN1Q8NBB4 408 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms