RNA–Protein interactions for RNA: ENST00000589294.1

DNMT1-218, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-218ENST00000589294 LINC00696Q6ZRV3 163 aa11.23□□□□□ -0.61
DNMT1-218ENST00000589294 NUP54Q7Z3B4 507 aa11.23□□□□□ -0.61
DNMT1-218ENST00000589294 WDR53Q7Z5U6 358 aaPredicted RBP11.23□□□□□ -0.61
DNMT1-218ENST00000589294 BEST3Q8N1M1 668 aa11.23□□□□□ -0.61
DNMT1-218ENST00000589294 TMEM156Q8N614 296 aa11.23□□□□□ -0.61
DNMT1-218ENST00000589294 METTL25Q8N6Q8 603 aa11.23□□□□□ -0.61
DNMT1-218ENST00000589294 HORMAD2Q8N7B1 307 aa11.23□□□□□ -0.61
DNMT1-218ENST00000589294 COX18Q8N8Q8 333 aa11.23□□□□□ -0.61
DNMT1-218ENST00000589294 CHDHQ8NE62 594 aaPredicted RBP11.23□□□□□ -0.61
DNMT1-218ENST00000589294 PNPT1Q8TCS8 783 aaKnown RBP11.23□□□□□ -0.61
DNMT1-218ENST00000589294 XAGE5Q8WWM1 108 aa11.23□□□□□ -0.61
DNMT1-218ENST00000589294 ASB15Q8WXK1 588 aa11.23□□□□□ -0.61
DNMT1-218ENST00000589294 TM9SF4Q92544 642 aa11.23□□□□□ -0.61
DNMT1-218ENST00000589294 PMM1Q92871 262 aa11.23□□□□□ -0.61
DNMT1-218ENST00000589294 ARHGAP9Q9BRR9 750 aa11.23□□□□□ -0.61
DNMT1-218ENST00000589294 UTP23Q9BRU9 249 aaKnown RBP11.23□□□□□ -0.61
DNMT1-218ENST00000589294 G6PC3Q9BUM1 346 aa11.23□□□□□ -0.61
DNMT1-218ENST00000589294 C1orf21Q9H246 121 aa11.23□□□□□ -0.61
DNMT1-218ENST00000589294 SERHL2Q9H4I8 314 aa11.23□□□□□ -0.61
DNMT1-218ENST00000589294 KAT8Q9H7Z6 458 aaKnown RBP11.23□□□□□ -0.61
DNMT1-218ENST00000589294 ZNF451Q9Y4E5 1061 aa11.23□□□□□ -0.61
DNMT1-218ENST00000589294 EPG5Q9HCE0 2579 aa11.23□□□□□ -0.61
DNMT1-218ENST00000589294 OR6C70A6NIJ9 312 aa11.22□□□□□ -0.61
DNMT1-218ENST00000589294 A8MVJ9 347 aa11.22□□□□□ -0.61
DNMT1-218ENST00000589294 EBAG9O00559 213 aa11.22□□□□□ -0.61
DNMT1-218ENST00000589294 ZNF354AO60765 605 aaPredicted RBP11.22□□□□□ -0.61
DNMT1-218ENST00000589294 HNRNPCL1O60812 293 aaKnown RBP11.22□□□□□ -0.61
DNMT1-218ENST00000589294 TNFRSF21O75509 655 aa11.22□□□□□ -0.61
DNMT1-218ENST00000589294 REM1O75628 298 aa11.22□□□□□ -0.61
DNMT1-218ENST00000589294 PPM1BO75688 479 aa11.22□□□□□ -0.61
DNMT1-218ENST00000589294 UBOX5O94941 541 aa11.22□□□□□ -0.61
DNMT1-218ENST00000589294 KCNK2O95069 426 aa11.22□□□□□ -0.61
DNMT1-218ENST00000589294 IL33O95760 270 aa11.22□□□□□ -0.61
DNMT1-218ENST00000589294 WDPCPO95876 746 aa11.22□□□□□ -0.61
DNMT1-218ENST00000589294 TFPTP0C1Z6 253 aa11.22□□□□□ -0.61
DNMT1-218ENST00000589294 SFTPCP11686 197 aa11.22□□□□□ -0.61
DNMT1-218ENST00000589294 ETFAP13804 333 aa11.22□□□□□ -0.61
DNMT1-218ENST00000589294 KRT20P35900 424 aa11.22□□□□□ -0.61
DNMT1-218ENST00000589294 CD96P40200 585 aa11.22□□□□□ -0.61
DNMT1-218ENST00000589294 CASRP41180 1078 aa11.22□□□□□ -0.61
DNMT1-218ENST00000589294 CPA2P48052 419 aa11.22□□□□□ -0.61
DNMT1-218ENST00000589294 CYB561P49447 251 aa11.22□□□□□ -0.61
DNMT1-218ENST00000589294 CASP9P55211 416 aa11.22□□□□□ -0.61
DNMT1-218ENST00000589294 DSTNP60981 165 aa11.22□□□□□ -0.61
DNMT1-218ENST00000589294 PSME3P61289 254 aa11.22□□□□□ -0.61
DNMT1-218ENST00000589294 GABPB1Q06547 395 aaPredicted RBP11.22□□□□□ -0.61
DNMT1-218ENST00000589294 BNIP1Q12981 228 aa11.22□□□□□ -0.61
DNMT1-218ENST00000589294 EFR3AQ14156 821 aa11.22□□□□□ -0.61
DNMT1-218ENST00000589294 NTRK2Q16620 822 aa11.22□□□□□ -0.61
DNMT1-218ENST00000589294 COL28A1Q2UY09 1125 aa11.22□□□□□ -0.61
DNMT1-218ENST00000589294 LINC00303Q3SY05 128 aa11.22□□□□□ -0.61
DNMT1-218ENST00000589294 C19orf48Q6RUI8 117 aa11.22□□□□□ -0.61
DNMT1-218ENST00000589294 C16orf89Q6UX73 402 aa11.22□□□□□ -0.61
DNMT1-218ENST00000589294 LYPD8Q6UX82 237 aa11.22□□□□□ -0.61
DNMT1-218ENST00000589294 SERPINA11Q86U17 422 aa11.22□□□□□ -0.61
DNMT1-218ENST00000589294 BCORP1Q8N888 145 aa11.22□□□□□ -0.61
DNMT1-218ENST00000589294 OR4N2Q8NGD1 307 aa11.22□□□□□ -0.61
DNMT1-218ENST00000589294 OR5D16Q8NGK9 328 aa11.22□□□□□ -0.61
DNMT1-218ENST00000589294 PIK3R3Q92569 461 aa11.22□□□□□ -0.61
DNMT1-218ENST00000589294 TTC9Q92623 222 aa11.22□□□□□ -0.61
DNMT1-218ENST00000589294 DIO2Q92813 273 aa11.22□□□□□ -0.61
DNMT1-218ENST00000589294 CDS1Q92903 461 aa11.22□□□□□ -0.61
DNMT1-218ENST00000589294 RAB8BQ92930 207 aa11.22□□□□□ -0.61
DNMT1-218ENST00000589294 TMBIM1Q969X1 311 aa11.22□□□□□ -0.61
DNMT1-218ENST00000589294 SPACA9Q96E40 222 aaPredicted RBP11.22□□□□□ -0.61
DNMT1-218ENST00000589294 OMA1Q96E52 524 aa11.22□□□□□ -0.61
DNMT1-218ENST00000589294 ABHD17AQ96GS6 310 aa11.22□□□□□ -0.61
DNMT1-218ENST00000589294 TRNT1Q96Q11 434 aaKnown RBP11.22□□□□□ -0.61
DNMT1-218ENST00000589294 SECISBP2Q96T21 854 aaKnown RBP11.22□□□□□ -0.61
DNMT1-218ENST00000589294 SDF2Q99470 211 aa11.22□□□□□ -0.61
DNMT1-218ENST00000589294 ECSITQ9BQ95 431 aa11.22□□□□□ -0.61
DNMT1-218ENST00000589294 SLC39A3Q9BRY0 314 aa11.22□□□□□ -0.61
DNMT1-218ENST00000589294 SPATA9Q9BWV2 254 aa11.22□□□□□ -0.61
DNMT1-218ENST00000589294 IKZF5Q9H5V7 419 aa11.22□□□□□ -0.61
DNMT1-218ENST00000589294 POLE3Q9NRF9 147 aa11.22□□□□□ -0.61
DNMT1-218ENST00000589294 L3MBTL1Q9Y468 752 aa11.22□□□□□ -0.61
DNMT1-218ENST00000589294 KCNE3Q9Y6H6 103 aa11.22□□□□□ -0.61
DNMT1-218ENST00000589294 CACNA1GO43497 2377 aa11.21□□□□□ -0.61
DNMT1-218ENST00000589294 GXYLT2A0PJZ3 443 aa11.21□□□□□ -0.61
DNMT1-218ENST00000589294 TMEM247A6NEH6 219 aa11.21□□□□□ -0.61
DNMT1-218ENST00000589294 TP53I11O14683 189 aa11.21□□□□□ -0.61
DNMT1-218ENST00000589294 TSPAN2O60636 221 aa11.21□□□□□ -0.61
DNMT1-218ENST00000589294 STX11O75558 287 aa11.21□□□□□ -0.61
DNMT1-218ENST00000589294 OR6B1O95007 311 aa11.21□□□□□ -0.61
DNMT1-218ENST00000589294 SOX3P41225 446 aa11.21□□□□□ -0.61
DNMT1-218ENST00000589294 RASSF2P50749 326 aa11.21□□□□□ -0.61
DNMT1-218ENST00000589294 MTPNP58546 118 aa11.21□□□□□ -0.61
DNMT1-218ENST00000589294 RPP38P78345 283 aaKnown RBP11.21□□□□□ -0.61
DNMT1-218ENST00000589294 MXRA7P84157 204 aa11.21□□□□□ -0.61
DNMT1-218ENST00000589294 RBBP4Q09028 425 aa11.21□□□□□ -0.61
DNMT1-218ENST00000589294 PLCXD2Q0VAA5 305 aa11.21□□□□□ -0.61
DNMT1-218ENST00000589294 KCNAB2Q13303 367 aa11.21□□□□□ -0.61
DNMT1-218ENST00000589294 TUBA3CQ13748 450 aa11.21□□□□□ -0.61
DNMT1-218ENST00000589294 NNATQ16517 81 aa11.21□□□□□ -0.61
DNMT1-218ENST00000589294 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.21□□□□□ -0.61
DNMT1-218ENST00000589294 SPATS1Q496A3 300 aa11.21□□□□□ -0.61
DNMT1-218ENST00000589294 RABL3Q5HYI8 236 aa11.21□□□□□ -0.61
DNMT1-218ENST00000589294 TUBA3EQ6PEY2 450 aa11.21□□□□□ -0.61
DNMT1-218ENST00000589294 IL20RBQ6UXL0 311 aa11.21□□□□□ -0.61
DNMT1-218ENST00000589294 C16orf62Q7Z3J2 963 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms