RNA–Protein interactions for RNA: ENST00000589219.1

VPS25-202, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-202ENST00000589219 IRF3Q14653 427 aa9.32□□□□□ -0.92
VPS25-202ENST00000589219 SPCS2Q15005 226 aa9.32□□□□□ -0.92
VPS25-202ENST00000589219 SEC23BQ15437 767 aa9.32□□□□□ -0.92
VPS25-202ENST00000589219 ZNF829Q3KNS6 432 aaPredicted RBP9.32□□□□□ -0.92
VPS25-202ENST00000589219 EIPR1Q53HC9 387 aa9.32□□□□□ -0.92
VPS25-202ENST00000589219 MEDAGQ5VYS4 303 aa9.32□□□□□ -0.92
VPS25-202ENST00000589219 HEPHL1Q6MZM0 1159 aa9.32□□□□□ -0.92
VPS25-202ENST00000589219 MFSD12Q6NUT3 480 aa9.32□□□□□ -0.92
VPS25-202ENST00000589219 ARMC6Q6NXE6 501 aa9.32□□□□□ -0.92
VPS25-202ENST00000589219 FBXO42Q6P3S6 717 aa9.32□□□□□ -0.92
VPS25-202ENST00000589219 PTCHD4Q6ZW05 846 aa9.32□□□□□ -0.92
VPS25-202ENST00000589219 PARGQ86W56 976 aa9.32□□□□□ -0.92
VPS25-202ENST00000589219 LACC1Q8IV20 430 aa9.32□□□□□ -0.92
VPS25-202ENST00000589219 OR2L13Q8N349 312 aa9.32□□□□□ -0.92
VPS25-202ENST00000589219 DEFB119Q8N690 84 aa9.32□□□□□ -0.92
VPS25-202ENST00000589219 DEFB124Q8NES8 71 aa9.32□□□□□ -0.92
VPS25-202ENST00000589219 TOR1AIP2Q8NFQ8 470 aa9.32□□□□□ -0.92
VPS25-202ENST00000589219 CADM4Q8NFZ8 388 aa9.32□□□□□ -0.92
VPS25-202ENST00000589219 OR4D11Q8NGI4 311 aa9.32□□□□□ -0.92
VPS25-202ENST00000589219 ADAMTS15Q8TE58 950 aa9.32□□□□□ -0.92
VPS25-202ENST00000589219 SLC37A2Q8TED4 501 aa9.32□□□□□ -0.92
VPS25-202ENST00000589219 GGHQ92820 318 aa9.32□□□□□ -0.92
VPS25-202ENST00000589219 CSF3RQ99062 836 aa9.32□□□□□ -0.92
VPS25-202ENST00000589219 PRRG3Q9BZD7 231 aa9.32□□□□□ -0.92
VPS25-202ENST00000589219 POLR2J2Q9GZM3 115 aaKnown RBP9.32□□□□□ -0.92
VPS25-202ENST00000589219 POLR2J3Q9H1A7 115 aaKnown RBP9.32□□□□□ -0.92
VPS25-202ENST00000589219 SLC38A1Q9H2H9 487 aa9.32□□□□□ -0.92
VPS25-202ENST00000589219 CAPN10Q9HC96 672 aa9.32□□□□□ -0.92
VPS25-202ENST00000589219 KCMF1Q9P0J7 381 aa9.32□□□□□ -0.92
VPS25-202ENST00000589219 RHCGQ9UBD6 479 aa9.32□□□□□ -0.92
VPS25-202ENST00000589219 REV1Q9UBZ9 1251 aa9.32□□□□□ -0.92
VPS25-202ENST00000589219 AASSQ9UDR5 926 aa9.32□□□□□ -0.92
VPS25-202ENST00000589219 IFT52Q9Y366 437 aa9.32□□□□□ -0.92
VPS25-202ENST00000589219 CACNA1EQ15878 2313 aa9.31□□□□□ -0.92
VPS25-202ENST00000589219 A0A087WV62 115 aa9.31□□□□□ -0.92
VPS25-202ENST00000589219 A0A1W2PPC4 97 aa9.31□□□□□ -0.92
VPS25-202ENST00000589219 TMEM8BA6NDV4 472 aa9.31□□□□□ -0.92
VPS25-202ENST00000589219 WASHC1A8K0Z3 465 aa9.31□□□□□ -0.92
VPS25-202ENST00000589219 TMX2-CTNND1H3BSU7 103 aa9.31□□□□□ -0.92
VPS25-202ENST00000589219 M0R3G1 203 aa9.31□□□□□ -0.92
VPS25-202ENST00000589219 CNOT3O75175 753 aaKnown RBP9.31□□□□□ -0.92
VPS25-202ENST00000589219 SEMA7AO75326 666 aa9.31□□□□□ -0.92
VPS25-202ENST00000589219 PROS1P07225 676 aa9.31□□□□□ -0.92
VPS25-202ENST00000589219 THBS1P07996 1170 aa9.31□□□□□ -0.92
VPS25-202ENST00000589219 THEGLP0DJG4 465 aa9.31□□□□□ -0.92
VPS25-202ENST00000589219 ADORA3P0DMS8 318 aa9.31□□□□□ -0.92
VPS25-202ENST00000589219 ALPPL2P10696 532 aa9.31□□□□□ -0.92
VPS25-202ENST00000589219 CTSEP14091 401 aa9.31□□□□□ -0.92
VPS25-202ENST00000589219 CPMP14384 443 aa9.31□□□□□ -0.92
VPS25-202ENST00000589219 ALDH4A1P30038 563 aa9.31□□□□□ -0.92
VPS25-202ENST00000589219 TGFBR2P37173 567 aa9.31□□□□□ -0.92
VPS25-202ENST00000589219 STT3AP46977 705 aa9.31□□□□□ -0.92
VPS25-202ENST00000589219 ENTPD1P49961 510 aa9.31□□□□□ -0.92
VPS25-202ENST00000589219 RAB15P59190 212 aa9.31□□□□□ -0.92
VPS25-202ENST00000589219 SKP1P63208 163 aa9.31□□□□□ -0.92
VPS25-202ENST00000589219 OCA2Q04671 838 aa9.31□□□□□ -0.92
VPS25-202ENST00000589219 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.31□□□□□ -0.92
VPS25-202ENST00000589219 FZD2Q14332 565 aa9.31□□□□□ -0.92
VPS25-202ENST00000589219 TCEA2Q15560 299 aa9.31□□□□□ -0.92
VPS25-202ENST00000589219 LTB4RQ15722 352 aa9.31□□□□□ -0.92
VPS25-202ENST00000589219 DGUOKQ16854 277 aa9.31□□□□□ -0.92
VPS25-202ENST00000589219 ZNF750Q32MQ0 723 aa9.31□□□□□ -0.92
VPS25-202ENST00000589219 DEFB134Q4QY38 66 aa9.31□□□□□ -0.92
VPS25-202ENST00000589219 ZNF628Q5EBL2 1059 aa9.31□□□□□ -0.92
VPS25-202ENST00000589219 ZNF311Q5JNZ3 666 aa9.31□□□□□ -0.92
VPS25-202ENST00000589219 NIPAL1Q6NVV3 410 aa9.31□□□□□ -0.92
VPS25-202ENST00000589219 ZCCHC12Q6PEW1 402 aa9.31□□□□□ -0.92
VPS25-202ENST00000589219 FAM111BQ6SJ93 734 aa9.31□□□□□ -0.92
VPS25-202ENST00000589219 UNQ6494/PRO21346Q6UXR6 183 aa9.31□□□□□ -0.92
VPS25-202ENST00000589219 CASP12Q6UXS9 341 aa9.31□□□□□ -0.92
VPS25-202ENST00000589219 ARHGAP22Q7Z5H3 698 aa9.31□□□□□ -0.92
VPS25-202ENST00000589219 TAF8Q7Z7C8 310 aa9.31□□□□□ -0.92
VPS25-202ENST00000589219 PIP4P1Q86T03 277 aa9.31□□□□□ -0.92
VPS25-202ENST00000589219 CSNK1A1LQ8N752 337 aa9.31□□□□□ -0.92
VPS25-202ENST00000589219 OR8J1Q8NGP2 316 aa9.31□□□□□ -0.92
VPS25-202ENST00000589219 ZNF675Q8TD23 568 aa9.31□□□□□ -0.92
VPS25-202ENST00000589219 ADAMTS18Q8TE60 1221 aa9.31□□□□□ -0.92
VPS25-202ENST00000589219 S100ZQ8WXG8 99 aa9.31□□□□□ -0.92
VPS25-202ENST00000589219 TANKQ92844 425 aa9.31□□□□□ -0.92
VPS25-202ENST00000589219 TOE1Q96GM8 510 aaKnown RBP9.31□□□□□ -0.92
VPS25-202ENST00000589219 FCRL4Q96PJ5 515 aa9.31□□□□□ -0.92
VPS25-202ENST00000589219 CCDC3Q9BQI4 270 aa9.31□□□□□ -0.92
VPS25-202ENST00000589219 RHNO1Q9BSD3 238 aa9.31□□□□□ -0.92
VPS25-202ENST00000589219 YIPF4Q9BSR8 244 aa9.31□□□□□ -0.92
VPS25-202ENST00000589219 CDCA4Q9BXL8 241 aa9.31□□□□□ -0.92
VPS25-202ENST00000589219 WDR12Q9GZL7 423 aaKnown RBP9.31□□□□□ -0.92
VPS25-202ENST00000589219 PCED1AQ9H1Q7 454 aa9.31□□□□□ -0.92
VPS25-202ENST00000589219 EVA1AQ9H8M9 152 aa9.31□□□□□ -0.92
VPS25-202ENST00000589219 SLC25A19Q9HC21 320 aa9.31□□□□□ -0.92
VPS25-202ENST00000589219 EQTNQ9NQ60 294 aa9.31□□□□□ -0.92
VPS25-202ENST00000589219 WSB2Q9NYS7 404 aaPredicted RBP9.31□□□□□ -0.92
VPS25-202ENST00000589219 POMT2Q9UKY4 750 aa9.31□□□□□ -0.92
VPS25-202ENST00000589219 SATB2Q9UPW6 733 aa9.31□□□□□ -0.92
VPS25-202ENST00000589219 PCDH15Q96QU1 1955 aa9.31□□□□□ -0.92
VPS25-202ENST00000589219 TRBV23OR9-2A0A075B6M9 112 aa9.3□□□□□ -0.92
VPS25-202ENST00000589219 IRGMA1A4Y4 181 aa9.3□□□□□ -0.92
VPS25-202ENST00000589219 BLACEA4D250 179 aa9.3□□□□□ -0.92
VPS25-202ENST00000589219 FAM227AF5H4B4 570 aa9.3□□□□□ -0.92
VPS25-202ENST00000589219 H0YGG7 62 aa9.3□□□□□ -0.92
VPS25-202ENST00000589219 H3BN98 237 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms