RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 PRTFDC1Q9NRG1 225 aa8.18□□□□□ -1.1
SMAD4-206ENST00000588860 RLIMQ9NVW2 624 aa8.18□□□□□ -1.1
SMAD4-206ENST00000588860 NLGN3Q9NZ94 848 aa8.18□□□□□ -1.1
SMAD4-206ENST00000588860 TMEM9Q9P0T7 183 aa8.18□□□□□ -1.1
SMAD4-206ENST00000588860 SUSD2Q9UGT4 822 aa8.18□□□□□ -1.1
SMAD4-206ENST00000588860 PILRBQ9UKJ0 227 aa8.18□□□□□ -1.1
SMAD4-206ENST00000588860 RALGAPA1Q6GYQ0 2036 aa8.18□□□□□ -1.1
SMAD4-206ENST00000588860 TRBV4-1A0A0J9YWV2 114 aa8.17□□□□□ -1.1
SMAD4-206ENST00000588860 ARRDC5A6NEK1 342 aa8.17□□□□□ -1.1
SMAD4-206ENST00000588860 CCDC160A6NGH7 325 aa8.17□□□□□ -1.1
SMAD4-206ENST00000588860 TRIM64CA6NLI5 447 aa8.17□□□□□ -1.1
SMAD4-206ENST00000588860 A8MU76 341 aa8.17□□□□□ -1.1
SMAD4-206ENST00000588860 TGFBR3LH3BV60 316 aa8.17□□□□□ -1.1
SMAD4-206ENST00000588860 SLC1A7O00341 560 aa8.17□□□□□ -1.1
SMAD4-206ENST00000588860 SYT5O00445 386 aa8.17□□□□□ -1.1
SMAD4-206ENST00000588860 CLDN4O14493 209 aa8.17□□□□□ -1.1
SMAD4-206ENST00000588860 B4GAT1O43505 415 aa8.17□□□□□ -1.1
SMAD4-206ENST00000588860 PCDHGA12O60330 932 aa8.17□□□□□ -1.1
SMAD4-206ENST00000588860 PLOD3O60568 738 aa8.17□□□□□ -1.1
SMAD4-206ENST00000588860 CTNSO60931 367 aa8.17□□□□□ -1.1
SMAD4-206ENST00000588860 COQ9O75208 318 aa8.17□□□□□ -1.1
SMAD4-206ENST00000588860 CDC123O75794 336 aaPredicted RBP8.17□□□□□ -1.1
SMAD4-206ENST00000588860 OR2B3O76000 313 aa8.17□□□□□ -1.1
SMAD4-206ENST00000588860 EPPINO95925 133 aa8.17□□□□□ -1.1
SMAD4-206ENST00000588860 LGI1O95970 557 aa8.17□□□□□ -1.1
SMAD4-206ENST00000588860 GIMD1P0DJR0 217 aa8.17□□□□□ -1.1
SMAD4-206ENST00000588860 CD46P15529 392 aa8.17□□□□□ -1.1
SMAD4-206ENST00000588860 AGXTP21549 392 aa8.17□□□□□ -1.1
SMAD4-206ENST00000588860 FUT4P22083 530 aa8.17□□□□□ -1.1
SMAD4-206ENST00000588860 CBLP22681 906 aa8.17□□□□□ -1.1
SMAD4-206ENST00000588860 ELAVL4P26378 380 aaKnown RBP8.17□□□□□ -1.1
SMAD4-206ENST00000588860 CD1CP29017 333 aa8.17□□□□□ -1.1
SMAD4-206ENST00000588860 GSSP48637 474 aa8.17□□□□□ -1.1
SMAD4-206ENST00000588860 HMGA2P52926 109 aa8.17□□□□□ -1.1
SMAD4-206ENST00000588860 NUP107P57740 925 aa8.17□□□□□ -1.1
SMAD4-206ENST00000588860 GABARAPL2P60520 117 aa8.17□□□□□ -1.1
SMAD4-206ENST00000588860 ISL1P61371 349 aa8.17□□□□□ -1.1
SMAD4-206ENST00000588860 RPP38P78345 283 aaKnown RBP8.17□□□□□ -1.1
SMAD4-206ENST00000588860 GPLD1P80108 840 aa8.17□□□□□ -1.1
SMAD4-206ENST00000588860 CFHR1Q03591 330 aa8.17□□□□□ -1.1
SMAD4-206ENST00000588860 NR1D2Q14995 579 aa8.17□□□□□ -1.1
SMAD4-206ENST00000588860 NR0B2Q15466 257 aa8.17□□□□□ -1.1
SMAD4-206ENST00000588860 NPTX1Q15818 432 aa8.17□□□□□ -1.1
SMAD4-206ENST00000588860 CNPY1Q3B7I2 92 aa8.17□□□□□ -1.1
SMAD4-206ENST00000588860 PLK5Q496M5 336 aa8.17□□□□□ -1.1
SMAD4-206ENST00000588860 DCST1Q5T197 706 aa8.17□□□□□ -1.1
SMAD4-206ENST00000588860 BROXQ5VW32 411 aa8.17□□□□□ -1.1
SMAD4-206ENST00000588860 MLIPQ5VWP3 458 aa8.17□□□□□ -1.1
SMAD4-206ENST00000588860 TCTN3Q6NUS6 607 aa8.17□□□□□ -1.1
SMAD4-206ENST00000588860 ZCCHC12Q6PEW1 402 aa8.17□□□□□ -1.1
SMAD4-206ENST00000588860 ZNF773Q6PK81 442 aa8.17□□□□□ -1.1
SMAD4-206ENST00000588860 DHRS4L2Q6PKH6 230 aa8.17□□□□□ -1.1
SMAD4-206ENST00000588860 FRRS1Q6ZNA5 592 aa8.17□□□□□ -1.1
SMAD4-206ENST00000588860 DGAT2L6Q6ZPD8 337 aa8.17□□□□□ -1.1
SMAD4-206ENST00000588860 GATAD2AQ86YP4 633 aa8.17□□□□□ -1.1
SMAD4-206ENST00000588860 PEX5LQ8IYB4 626 aa8.17□□□□□ -1.1
SMAD4-206ENST00000588860 ZNF595Q8IYB9 648 aa8.17□□□□□ -1.1
SMAD4-206ENST00000588860 CARFQ8N187 725 aa8.17□□□□□ -1.1
SMAD4-206ENST00000588860 VWA5B2Q8N398 1253 aa8.17□□□□□ -1.1
SMAD4-206ENST00000588860 COX18Q8N8Q8 333 aa8.17□□□□□ -1.1
SMAD4-206ENST00000588860 CDRT4Q8N9R6 151 aa8.17□□□□□ -1.1
SMAD4-206ENST00000588860 AQP11Q8NBQ7 271 aa8.17□□□□□ -1.1
SMAD4-206ENST00000588860 OR52R1Q8NGF1 315 aa8.17□□□□□ -1.1
SMAD4-206ENST00000588860 OR6T1Q8NGN1 323 aa8.17□□□□□ -1.1
SMAD4-206ENST00000588860 OR52P1PQ8NH57 321 aa8.17□□□□□ -1.1
SMAD4-206ENST00000588860 OR51Q1Q8NH59 317 aa8.17□□□□□ -1.1
SMAD4-206ENST00000588860 CNIH3Q8TBE1 160 aa8.17□□□□□ -1.1
SMAD4-206ENST00000588860 FBLIM1Q8WUP2 373 aa8.17□□□□□ -1.1
SMAD4-206ENST00000588860 GTPBP3Q969Y2 492 aaKnown RBP8.17□□□□□ -1.1
SMAD4-206ENST00000588860 PRRC1Q96M27 445 aa8.17□□□□□ -1.1
SMAD4-206ENST00000588860 DGAT2Q96PD7 388 aa8.17□□□□□ -1.1
SMAD4-206ENST00000588860 PITX2Q99697 317 aa8.17□□□□□ -1.1
SMAD4-206ENST00000588860 ARHGDIGQ99819 225 aa8.17□□□□□ -1.1
SMAD4-206ENST00000588860 NIPSNAP1Q9BPW8 284 aa8.17□□□□□ -1.1
SMAD4-206ENST00000588860 WFDC6Q9BQY6 131 aa8.17□□□□□ -1.1
SMAD4-206ENST00000588860 FNDC11Q9BVV2 318 aa8.17□□□□□ -1.1
SMAD4-206ENST00000588860 YIPF2Q9BWQ6 316 aa8.17□□□□□ -1.1
SMAD4-206ENST00000588860 PIGUQ9H490 435 aa8.17□□□□□ -1.1
SMAD4-206ENST00000588860 CAPN10Q9HC96 672 aa8.17□□□□□ -1.1
SMAD4-206ENST00000588860 FSCN3Q9NQT6 498 aa8.17□□□□□ -1.1
SMAD4-206ENST00000588860 CUTCQ9NTM9 273 aa8.17□□□□□ -1.1
SMAD4-206ENST00000588860 NDOR1Q9UHB4 597 aa8.17□□□□□ -1.1
SMAD4-206ENST00000588860 BLOC1S6Q9UL45 172 aa8.17□□□□□ -1.1
SMAD4-206ENST00000588860 NDRG4Q9ULP0 352 aaKnown RBP8.17□□□□□ -1.1
SMAD4-206ENST00000588860 A4GNTQ9UNA3 340 aa8.17□□□□□ -1.1
SMAD4-206ENST00000588860 ZNF443Q9Y2A4 671 aaPredicted RBP8.17□□□□□ -1.1
SMAD4-206ENST00000588860 WDR45Q9Y484 360 aa8.17□□□□□ -1.1
SMAD4-206ENST00000588860 MAU2Q9Y6X3 613 aa8.17□□□□□ -1.1
SMAD4-206ENST00000588860 HSPE1-MOB4S4R3N1 261 aa8.17□□□□□ -1.1
SMAD4-206ENST00000588860 MN1Q10571 1320 aaPredicted RBP8.17□□□□□ -1.1
SMAD4-206ENST00000588860 DSPPQ9NZW4 1301 aa8.17□□□□□ -1.1
SMAD4-206ENST00000588860 A0A1B0GTQ1 180 aa8.16□□□□□ -1.1
SMAD4-206ENST00000588860 GXYLT2A0PJZ3 443 aa8.16□□□□□ -1.1
SMAD4-206ENST00000588860 E9PQ18 207 aa8.16□□□□□ -1.1
SMAD4-206ENST00000588860 H0YIG0 161 aa8.16□□□□□ -1.1
SMAD4-206ENST00000588860 FRS3O43559 492 aa8.16□□□□□ -1.1
SMAD4-206ENST00000588860 FCMRO60667 390 aa8.16□□□□□ -1.1
SMAD4-206ENST00000588860 SEMA7AO75326 666 aa8.16□□□□□ -1.1
SMAD4-206ENST00000588860 OXSR1O95747 527 aaPredicted RBP8.16□□□□□ -1.1
SMAD4-206ENST00000588860 ANGPTL1O95841 491 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms