RNA–Protein interactions for RNA: ENST00000588692.5

DDX39A-208, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,478 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-208ENST00000588692 PIP5K1BO14986 540 aa13.17□□□□□ -0.3
DDX39A-208ENST00000588692 TOXO94900 526 aa13.17□□□□□ -0.3
DDX39A-208ENST00000588692 ACTL6AO96019 429 aa13.17□□□□□ -0.3
DDX39A-208ENST00000588692 BPGMP07738 259 aa13.17□□□□□ -0.3
DDX39A-208ENST00000588692 MAPK1P28482 360 aa13.17□□□□□ -0.3
DDX39A-208ENST00000588692 SSTR2P30874 369 aa13.17□□□□□ -0.3
DDX39A-208ENST00000588692 ETV4P43268 484 aa13.17□□□□□ -0.3
DDX39A-208ENST00000588692 TFF3Q07654 80 aa13.17□□□□□ -0.3
DDX39A-208ENST00000588692 ZNF844Q08AG5 666 aa13.17□□□□□ -0.3
DDX39A-208ENST00000588692 GALNTL6Q49A17 601 aa13.17□□□□□ -0.3
DDX39A-208ENST00000588692 XKR7Q5GH72 579 aa13.17□□□□□ -0.3
DDX39A-208ENST00000588692 WIPI1Q5MNZ9 446 aaPredicted RBP13.17□□□□□ -0.3
DDX39A-208ENST00000588692 ZCCHC23Q6ZST2 131 aa13.17□□□□□ -0.3
DDX39A-208ENST00000588692 PLCZ1Q86YW0 608 aa13.17□□□□□ -0.3
DDX39A-208ENST00000588692 WDSUB1Q8N9V3 476 aa13.17□□□□□ -0.3
DDX39A-208ENST00000588692 FAM83FQ8NEG4 500 aaPredicted RBP13.17□□□□□ -0.3
DDX39A-208ENST00000588692 RNF138Q8WVD3 245 aa13.17□□□□□ -0.3
DDX39A-208ENST00000588692 PPCDCQ96CD2 204 aa13.17□□□□□ -0.3
DDX39A-208ENST00000588692 ZBED6CLQ96FA7 236 aaPredicted RBP13.17□□□□□ -0.3
DDX39A-208ENST00000588692 TSSK3Q96PN8 268 aa13.17□□□□□ -0.3
DDX39A-208ENST00000588692 OR2B2Q9GZK3 357 aa13.17□□□□□ -0.3
DDX39A-208ENST00000588692 Q9N2J8 555 aa13.17□□□□□ -0.3
DDX39A-208ENST00000588692 SSU72Q9NP77 194 aaKnown RBP13.17□□□□□ -0.3
DDX39A-208ENST00000588692 Q9UFV3 132 aa13.17□□□□□ -0.3
DDX39A-208ENST00000588692 MRTO4Q9UKD2 239 aaKnown RBP13.17□□□□□ -0.3
DDX39A-208ENST00000588692 RAB21Q9UL25 225 aa13.17□□□□□ -0.3
DDX39A-208ENST00000588692 MAPRE3Q9UPY8 281 aa13.17□□□□□ -0.3
DDX39A-208ENST00000588692 DCHS2Q6V1P9 2916 aa13.17□□□□□ -0.3
DDX39A-208ENST00000588692 FBN2P35556 2912 aa13.17□□□□□ -0.3
DDX39A-208ENST00000588692 NKX2-6A6NCS4 301 aa13.16□□□□□ -0.3
DDX39A-208ENST00000588692 HSPB2A8KAH6 182 aa13.16□□□□□ -0.3
DDX39A-208ENST00000588692 ESPNB1AK53 854 aa13.16□□□□□ -0.3
DDX39A-208ENST00000588692 RGS16O15492 202 aaPredicted RBP13.16□□□□□ -0.3
DDX39A-208ENST00000588692 NME6O75414 186 aaPredicted RBP13.16□□□□□ -0.3
DDX39A-208ENST00000588692 CREB1P16220 341 aa13.16□□□□□ -0.3
DDX39A-208ENST00000588692 IGFBP2P18065 325 aa13.16□□□□□ -0.3
DDX39A-208ENST00000588692 MSX1P28360 303 aa13.16□□□□□ -0.3
DDX39A-208ENST00000588692 GPC1P35052 558 aa13.16□□□□□ -0.3
DDX39A-208ENST00000588692 RPL3P39023 403 aaKnown RBP13.16□□□□□ -0.3
DDX39A-208ENST00000588692 ADH7P40394 386 aa13.16□□□□□ -0.3
DDX39A-208ENST00000588692 HSPB2Q16082 182 aa13.16□□□□□ -0.3
DDX39A-208ENST00000588692 DECR1Q16698 335 aa13.16□□□□□ -0.3
DDX39A-208ENST00000588692 SLC25A35Q3KQZ1 300 aa13.16□□□□□ -0.3
DDX39A-208ENST00000588692 ACSF3Q4G176 576 aaPredicted RBP13.16□□□□□ -0.3
DDX39A-208ENST00000588692 EIPR1Q53HC9 387 aa13.16□□□□□ -0.3
DDX39A-208ENST00000588692 LRIG3Q6UXM1 1119 aa13.16□□□□□ -0.3
DDX39A-208ENST00000588692 MEX3BQ6ZN04 569 aaKnown RBP13.16□□□□□ -0.3
DDX39A-208ENST00000588692 R3HCC1LQ7Z5L2 792 aaKnown RBP13.16□□□□□ -0.3
DDX39A-208ENST00000588692 LACC1Q8IV20 430 aa13.16□□□□□ -0.3
DDX39A-208ENST00000588692 OR6Y1Q8NGX8 325 aa13.16□□□□□ -0.3
DDX39A-208ENST00000588692 GFM2Q969S9 779 aaKnown RBP13.16□□□□□ -0.3
DDX39A-208ENST00000588692 EFHD2Q96C19 240 aaPredicted RBP13.16□□□□□ -0.3
DDX39A-208ENST00000588692 C14orf79Q96F83 325 aa13.16□□□□□ -0.3
DDX39A-208ENST00000588692 LMF2Q9BU23 707 aaKnown RBP13.16□□□□□ -0.3
DDX39A-208ENST00000588692 UGT2B28Q9BY64 529 aa13.16□□□□□ -0.3
DDX39A-208ENST00000588692 C3orf14Q9HBI5 128 aa13.16□□□□□ -0.3
DDX39A-208ENST00000588692 SERHLQ9NQF3 203 aa13.16□□□□□ -0.3
DDX39A-208ENST00000588692 ACSS1Q9NUB1 689 aaPredicted RBP13.16□□□□□ -0.3
DDX39A-208ENST00000588692 CBLCQ9ULV8 474 aa13.16□□□□□ -0.3
DDX39A-208ENST00000588692 ABCG2Q9UNQ0 655 aa13.16□□□□□ -0.3
DDX39A-208ENST00000588692 SLC6A5Q9Y345 797 aa13.16□□□□□ -0.3
DDX39A-208ENST00000588692 CREBBPQ92793 2442 aa13.16□□□□□ -0.3
DDX39A-208ENST00000588692 C2orf72A6NCS6 295 aa13.16□□□□□ -0.3
DDX39A-208ENST00000588692 CTIFO43310 598 aaKnown RBP13.16□□□□□ -0.3
DDX39A-208ENST00000588692 AKAP10O43572 662 aa13.16□□□□□ -0.3
DDX39A-208ENST00000588692 EPPINO95925 133 aa13.16□□□□□ -0.3
DDX39A-208ENST00000588692 BCKDHAP12694 445 aa13.16□□□□□ -0.3
DDX39A-208ENST00000588692 BMP7P18075 431 aa13.16□□□□□ -0.3
DDX39A-208ENST00000588692 SRD5A2P31213 254 aa13.16□□□□□ -0.3
DDX39A-208ENST00000588692 FRKP42685 505 aaPredicted RBP13.16□□□□□ -0.3
DDX39A-208ENST00000588692 PSMD4P55036 377 aaKnown RBP13.16□□□□□ -0.3
DDX39A-208ENST00000588692 HSPB3Q12988 150 aa13.16□□□□□ -0.3
DDX39A-208ENST00000588692 VPS26BQ4G0F5 336 aa13.16□□□□□ -0.3
DDX39A-208ENST00000588692 ATP6AP1LQ52LC2 224 aa13.16□□□□□ -0.3
DDX39A-208ENST00000588692 ANKRD26P1Q6NSI1 321 aa13.16□□□□□ -0.3
DDX39A-208ENST00000588692 ZNF551Q7Z340 670 aaPredicted RBP13.16□□□□□ -0.3
DDX39A-208ENST00000588692 CROCCP2Q86T23 111 aa13.16□□□□□ -0.3
DDX39A-208ENST00000588692 OR4N2Q8NGD1 307 aa13.16□□□□□ -0.3
DDX39A-208ENST00000588692 OR14L1PQ8NHC6 308 aa13.16□□□□□ -0.3
DDX39A-208ENST00000588692 AGR3Q8TD06 166 aa13.16□□□□□ -0.3
DDX39A-208ENST00000588692 ABTB1Q969K4 478 aaPredicted RBP13.16□□□□□ -0.3
DDX39A-208ENST00000588692 UCK2Q9BZX2 261 aa13.16□□□□□ -0.3
DDX39A-208ENST00000588692 SLC24A3Q9HC58 644 aa13.16□□□□□ -0.3
DDX39A-208ENST00000588692 NPDC1Q9NQX5 325 aaPredicted RBP13.16□□□□□ -0.3
DDX39A-208ENST00000588692 CAMK2AQ9UQM7 478 aa13.16□□□□□ -0.3
DDX39A-208ENST00000588692 MRPS18CQ9Y3D5 142 aaKnown RBP13.16□□□□□ -0.3
DDX39A-208ENST00000588692 INTS1Q8N201 2190 aaKnown RBP13.15□□□□□ -0.3
DDX39A-208ENST00000588692 TM9SF1O15321 606 aa13.15□□□□□ -0.3
DDX39A-208ENST00000588692 PRPS2P11908 318 aa13.15□□□□□ -0.3
DDX39A-208ENST00000588692 CYP4B1P13584 511 aa13.15□□□□□ -0.3
DDX39A-208ENST00000588692 GRK2P25098 689 aa13.15□□□□□ -0.3
DDX39A-208ENST00000588692 ARRB2P32121 409 aa13.15□□□□□ -0.3
DDX39A-208ENST00000588692 EVI2BP34910 448 aa13.15□□□□□ -0.3
DDX39A-208ENST00000588692 TIMP3P35625 211 aa13.15□□□□□ -0.3
DDX39A-208ENST00000588692 HPCAL1P37235 193 aa13.15□□□□□ -0.3
DDX39A-208ENST00000588692 SERPINB4P48594 390 aa13.15□□□□□ -0.3
DDX39A-208ENST00000588692 GAS1P54826 345 aa13.15□□□□□ -0.3
DDX39A-208ENST00000588692 MANFP55145 182 aaKnown RBP13.15□□□□□ -0.3
DDX39A-208ENST00000588692 NSUN5P2Q63ZY6 315 aa13.15□□□□□ -0.3
DDX39A-208ENST00000588692 ENPP6Q6UWR7 440 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms