RNA–Protein interactions for RNA: ENST00000588074.1

LINC01538-201, Transcript of long intergenic non-protein coding RNA 1538, humanhuman

TSL 1 (best) BASIC

Gene LINC01538, Length 2,408 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01538-201ENST00000588074 FAM212BQ9NTI7 297 aaPredicted RBP5.31□□□□□ -1.56
LINC01538-201ENST00000588074 LIN7CQ9NUP9 197 aaKnown RBP5.31□□□□□ -1.56
LINC01538-201ENST00000588074 USE1Q9NZ43 259 aa5.31□□□□□ -1.56
LINC01538-201ENST00000588074 MOKQ9UQ07 419 aa5.31□□□□□ -1.56
LINC01538-201ENST00000588074 PDE10AQ9Y233 779 aa5.31□□□□□ -1.56
LINC01538-201ENST00000588074 STRCQ7RTU9 1775 aa5.31□□□□□ -1.56
LINC01538-201ENST00000588074 RNF103-CHMP3A0A140T963 221 aa5.31□□□□□ -1.56
LINC01538-201ENST00000588074 C1orf196B1AJZ1 125 aa5.31□□□□□ -1.56
LINC01538-201ENST00000588074 ARPC5O15511 151 aa5.31□□□□□ -1.56
LINC01538-201ENST00000588074 SPRY1O43609 319 aaPredicted RBP5.31□□□□□ -1.56
LINC01538-201ENST00000588074 SLCO2B1O94956 709 aa5.31□□□□□ -1.56
LINC01538-201ENST00000588074 CEACAM5P06731 702 aa5.31□□□□□ -1.56
LINC01538-201ENST00000588074 INHBAP08476 426 aa5.31□□□□□ -1.56
LINC01538-201ENST00000588074 CTXN2P0C2S0 81 aa5.31□□□□□ -1.56
LINC01538-201ENST00000588074 MYOGP15173 224 aa5.31□□□□□ -1.56
LINC01538-201ENST00000588074 HIST1H1BP16401 226 aaKnown RBP5.31□□□□□ -1.56
LINC01538-201ENST00000588074 LBPP18428 481 aa5.31□□□□□ -1.56
LINC01538-201ENST00000588074 BDKRB2P30411 391 aa5.31□□□□□ -1.56
LINC01538-201ENST00000588074 CALCRP30988 508 aa5.31□□□□□ -1.56
LINC01538-201ENST00000588074 MAGEA6P43360 314 aa5.31□□□□□ -1.56
LINC01538-201ENST00000588074 GABRB2P47870 512 aa5.31□□□□□ -1.56
LINC01538-201ENST00000588074 LIMS1P48059 325 aa5.31□□□□□ -1.56
LINC01538-201ENST00000588074 NUMBP49757 651 aa5.31□□□□□ -1.56
LINC01538-201ENST00000588074 GMPSP49915 693 aaPredicted RBP5.31□□□□□ -1.56
LINC01538-201ENST00000588074 RAB5CP51148 216 aa5.31□□□□□ -1.56
LINC01538-201ENST00000588074 ACTBP60709 375 aa5.31□□□□□ -1.56
LINC01538-201ENST00000588074 GMFBP60983 142 aa5.31□□□□□ -1.56
LINC01538-201ENST00000588074 ACTA2P62736 377 aa5.31□□□□□ -1.56
LINC01538-201ENST00000588074 ACTG1P63261 375 aa5.31□□□□□ -1.56
LINC01538-201ENST00000588074 ACTG2P63267 376 aa5.31□□□□□ -1.56
LINC01538-201ENST00000588074 ACTC1P68032 377 aa5.31□□□□□ -1.56
LINC01538-201ENST00000588074 ACTA1P68133 377 aa5.31□□□□□ -1.56
LINC01538-201ENST00000588074 SP3Q02447 781 aa5.31□□□□□ -1.56
LINC01538-201ENST00000588074 ELAVL2Q12926 359 aaKnown RBP5.31□□□□□ -1.56
LINC01538-201ENST00000588074 CHIT1Q13231 466 aa5.31□□□□□ -1.56
LINC01538-201ENST00000588074 SIX1Q15475 284 aaPredicted RBP5.31□□□□□ -1.56
LINC01538-201ENST00000588074 LPCAT3Q6P1A2 487 aa5.31□□□□□ -1.56
LINC01538-201ENST00000588074 CHMP1BQ7LBR1 199 aa5.31□□□□□ -1.56
LINC01538-201ENST00000588074 ZNF551Q7Z340 670 aaPredicted RBP5.31□□□□□ -1.56
LINC01538-201ENST00000588074 PPP1R32Q7Z5V6 425 aa5.31□□□□□ -1.56
LINC01538-201ENST00000588074 PEG10Q86TG7 708 aaKnown RBP5.31□□□□□ -1.56
LINC01538-201ENST00000588074 RASGEF1AQ8N9B8 481 aa5.31□□□□□ -1.56
LINC01538-201ENST00000588074 OR4C15Q8NGM1 316 aa5.31□□□□□ -1.56
LINC01538-201ENST00000588074 OIT3Q8WWZ8 545 aa5.31□□□□□ -1.56
LINC01538-201ENST00000588074 HGDQ93099 445 aa5.31□□□□□ -1.56
LINC01538-201ENST00000588074 SLCO4A1Q96BD0 722 aa5.31□□□□□ -1.56
LINC01538-201ENST00000588074 MASTLQ96GX5 879 aa5.31□□□□□ -1.56
LINC01538-201ENST00000588074 CENPNQ96H22 339 aaPredicted RBP5.31□□□□□ -1.56
LINC01538-201ENST00000588074 LRR1Q96L50 414 aa5.31□□□□□ -1.56
LINC01538-201ENST00000588074 LINC00615Q96LM1 132 aaPredicted RBP5.31□□□□□ -1.56
LINC01538-201ENST00000588074 RDH12Q96NR8 316 aa5.31□□□□□ -1.56
LINC01538-201ENST00000588074 NODALQ96S42 347 aa5.31□□□□□ -1.56
LINC01538-201ENST00000588074 RAD9AQ99638 391 aa5.31□□□□□ -1.56
LINC01538-201ENST00000588074 PRRX2Q99811 253 aa5.31□□□□□ -1.56
LINC01538-201ENST00000588074 SLC30A2Q9BRI3 323 aa5.31□□□□□ -1.56
LINC01538-201ENST00000588074 MRI1Q9BV20 369 aa5.31□□□□□ -1.56
LINC01538-201ENST00000588074 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.31□□□□□ -1.56
LINC01538-201ENST00000588074 ZFP57Q9NU63 452 aa5.31□□□□□ -1.56
LINC01538-201ENST00000588074 PRMT7Q9NVM4 692 aaPredicted RBP5.31□□□□□ -1.56
LINC01538-201ENST00000588074 FBXL2Q9UKC9 423 aa5.31□□□□□ -1.56
LINC01538-201ENST00000588074 CDYLQ9Y232 598 aa5.31□□□□□ -1.56
LINC01538-201ENST00000588074 USP54Q70EL1 1684 aa5.3□□□□□ -1.56
LINC01538-201ENST00000588074 CRB1P82279 1406 aa5.3□□□□□ -1.56
LINC01538-201ENST00000588074 A0A075B6Q4 140 aa5.3□□□□□ -1.56
LINC01538-201ENST00000588074 GLOD5A6NK44 160 aa5.3□□□□□ -1.56
LINC01538-201ENST00000588074 EFCAB9A8MZ26 197 aa5.3□□□□□ -1.56
LINC01538-201ENST00000588074 ADM5C9JUS6 153 aa5.3□□□□□ -1.56
LINC01538-201ENST00000588074 BCAT2O15382 392 aaPredicted RBP5.3□□□□□ -1.56
LINC01538-201ENST00000588074 SIGLEC5O15389 551 aa5.3□□□□□ -1.56
LINC01538-201ENST00000588074 OR10H2O60403 315 aa5.3□□□□□ -1.56
LINC01538-201ENST00000588074 CTAG2O75638 210 aa5.3□□□□□ -1.56
LINC01538-201ENST00000588074 GLUD1P00367 558 aa5.3□□□□□ -1.56
LINC01538-201ENST00000588074 F10P00742 488 aa5.3□□□□□ -1.56
LINC01538-201ENST00000588074 PPBPP02775 128 aa5.3□□□□□ -1.56
LINC01538-201ENST00000588074 HMGCRP04035 888 aa5.3□□□□□ -1.56
LINC01538-201ENST00000588074 CRYBA1P05813 215 aa5.3□□□□□ -1.56
LINC01538-201ENST00000588074 ZGLP1P0C6A0 271 aa5.3□□□□□ -1.56
LINC01538-201ENST00000588074 OR56A5P0C7T3 313 aa5.3□□□□□ -1.56
LINC01538-201ENST00000588074 METTL15P1P0C7V9 234 aa5.3□□□□□ -1.56
LINC01538-201ENST00000588074 GABRB1P18505 474 aa5.3□□□□□ -1.56
LINC01538-201ENST00000588074 TSPAN8P19075 237 aa5.3□□□□□ -1.56
LINC01538-201ENST00000588074 CD72P21854 359 aa5.3□□□□□ -1.56
LINC01538-201ENST00000588074 SDHBP21912 280 aa5.3□□□□□ -1.56
LINC01538-201ENST00000588074 DTYMKP23919 212 aa5.3□□□□□ -1.56
LINC01538-201ENST00000588074 YWHABP31946 246 aaKnown RBP5.3□□□□□ -1.56
LINC01538-201ENST00000588074 RPS9P46781 194 aaKnown RBP5.3□□□□□ -1.56
LINC01538-201ENST00000588074 CDC34P49427 236 aaPredicted RBP5.3□□□□□ -1.56
LINC01538-201ENST00000588074 GLUD2P49448 558 aa5.3□□□□□ -1.56
LINC01538-201ENST00000588074 NAGLUP54802 743 aa5.3□□□□□ -1.56
LINC01538-201ENST00000588074 NCS1P62166 190 aa5.3□□□□□ -1.56
LINC01538-201ENST00000588074 RPL7AP62424 266 aaKnown RBP5.3□□□□□ -1.56
LINC01538-201ENST00000588074 DCDP81605 110 aaKnown RBP5.3□□□□□ -1.56
LINC01538-201ENST00000588074 EIF4EBP2Q13542 120 aaPredicted RBP5.3□□□□□ -1.56
LINC01538-201ENST00000588074 PIGHQ14442 188 aaPredicted RBP5.3□□□□□ -1.56
LINC01538-201ENST00000588074 USF2Q15853 346 aaPredicted RBP5.3□□□□□ -1.56
LINC01538-201ENST00000588074 SBK1Q52WX2 424 aa5.3□□□□□ -1.56
LINC01538-201ENST00000588074 FAM74A1Q5RGS3 127 aa5.3□□□□□ -1.56
LINC01538-201ENST00000588074 PRAMEF19Q5SWL8 479 aa5.3□□□□□ -1.56
LINC01538-201ENST00000588074 ARMC12Q5T9G4 340 aa5.3□□□□□ -1.56
LINC01538-201ENST00000588074 STRIP1Q5VSL9 837 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms