RNA–Protein interactions for RNA: ENST00000587718.5

CAPNS1-204, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CAPNS1, Length 1,558 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-204ENST00000587718 ILF3Q12906 894 aaKnown RBP eCLIP23.81■■□□□ 1.4
CAPNS1-204ENST00000587718 RAB11FIP2Q7L804 512 aa23.81■■□□□ 1.4
CAPNS1-204ENST00000587718 TMPRSS9Q7Z410 1059 aa23.81■■□□□ 1.4
CAPNS1-204ENST00000587718 ZNF438Q7Z4V0 828 aa23.81■■□□□ 1.4
CAPNS1-204ENST00000587718 DNAJC22Q8N4W6 341 aa23.81■■□□□ 1.4
CAPNS1-204ENST00000587718 AMER3Q8N944 861 aa23.81■■□□□ 1.4
CAPNS1-204ENST00000587718 LSM14AQ8ND56 463 aaKnown RBP23.81■■□□□ 1.4
CAPNS1-204ENST00000587718 C9orf43Q8TAL5 461 aaPredicted RBP23.81■■□□□ 1.4
CAPNS1-204ENST00000587718 SNRNP27Q8WVK2 155 aaKnown RBP23.81■■□□□ 1.4
CAPNS1-204ENST00000587718 TREX2Q9BQ50 279 aaPredicted RBP23.81■■□□□ 1.4
CAPNS1-204ENST00000587718 DGCR6LQ9BY27 220 aa23.81■■□□□ 1.4
CAPNS1-204ENST00000587718 C3orf14Q9HBI5 128 aa23.81■■□□□ 1.4
CAPNS1-204ENST00000587718 SPHK1Q9NYA1 384 aa23.81■■□□□ 1.4
CAPNS1-204ENST00000587718 NDOR1Q9UHB4 597 aa23.81■■□□□ 1.4
CAPNS1-204ENST00000587718 ATXN7L1Q9ULK2 861 aaPredicted RBP23.81■■□□□ 1.4
CAPNS1-204ENST00000587718 LIPT1Q9Y234 373 aa23.81■■□□□ 1.4
CAPNS1-204ENST00000587718 URADA6NGE7 173 aa23.8■■□□□ 1.4
CAPNS1-204ENST00000587718 CLDN24A6NM45 220 aa23.8■■□□□ 1.4
CAPNS1-204ENST00000587718 ZAR1LA6NP61 321 aa23.8■■□□□ 1.4
CAPNS1-204ENST00000587718 CLCA1A8K7I4 914 aa23.8■■□□□ 1.4
CAPNS1-204ENST00000587718 ISM1B1AKI9 464 aa23.8■■□□□ 1.4
CAPNS1-204ENST00000587718 EMC8O43402 210 aa23.8■■□□□ 1.4
CAPNS1-204ENST00000587718 BCAS1O75363 584 aaPredicted RBP23.8■■□□□ 1.4
CAPNS1-204ENST00000587718 CTF1Q16619 201 aa23.8■■□□□ 1.4
CAPNS1-204ENST00000587718 NDUFA9Q16795 377 aa23.8■■□□□ 1.4
CAPNS1-204ENST00000587718 PCSK4Q6UW60 755 aa23.8■■□□□ 1.4
CAPNS1-204ENST00000587718 SUN3Q8TAQ9 357 aa23.8■■□□□ 1.4
CAPNS1-204ENST00000587718 FAM81AQ8TBF8 368 aa23.8■■□□□ 1.4
CAPNS1-204ENST00000587718 ZDHHC1Q8WTX9 485 aa23.8■■□□□ 1.4
CAPNS1-204ENST00000587718 NIPSNAP1Q9BPW8 284 aa23.8■■□□□ 1.4
CAPNS1-204ENST00000587718 SERHL2Q9H4I8 314 aa23.8■■□□□ 1.4
CAPNS1-204ENST00000587718 CPNE5Q9HCH3 593 aa23.8■■□□□ 1.4
CAPNS1-204ENST00000587718 CNOT2Q9NZN8 540 aaKnown RBP23.8■■□□□ 1.4
CAPNS1-204ENST00000587718 NTMQ9P121 344 aa23.8■■□□□ 1.4
CAPNS1-204ENST00000587718 SEC14L3Q9UDX4 400 aa23.8■■□□□ 1.4
CAPNS1-204ENST00000587718 PHF11Q9UIL8 331 aa23.8■■□□□ 1.4
CAPNS1-204ENST00000587718 SLC9A8Q9Y2E8 581 aa23.8■■□□□ 1.4
CAPNS1-204ENST00000587718 MGAQ8IWI9 3026 aa23.8■■□□□ 1.4
CAPNS1-204ENST00000587718 FASNP49327 2511 aaKnown RBP23.79■■□□□ 1.4
CAPNS1-204ENST00000587718 OR2A25A4D2G3 310 aa23.79■■□□□ 1.4
CAPNS1-204ENST00000587718 SYT5O00445 386 aa23.79■■□□□ 1.4
CAPNS1-204ENST00000587718 PCDH17O14917 1159 aa23.79■■□□□ 1.4
CAPNS1-204ENST00000587718 ZW10O43264 779 aa23.79■■□□□ 1.4
CAPNS1-204ENST00000587718 PROM1O43490 865 aa23.79■■□□□ 1.4
CAPNS1-204ENST00000587718 CLPXO76031 633 aa23.79■■□□□ 1.4
CAPNS1-204ENST00000587718 AIFM1O95831 613 aa23.79■■□□□ 1.4
CAPNS1-204ENST00000587718 H1F0P07305 194 aaKnown RBP23.79■■□□□ 1.4
CAPNS1-204ENST00000587718 IFI6P09912 130 aa23.79■■□□□ 1.4
CAPNS1-204ENST00000587718 MASP1P48740 699 aa23.79■■□□□ 1.4
CAPNS1-204ENST00000587718 MAZP56270 477 aaKnown RBP23.79■■□□□ 1.4
CAPNS1-204ENST00000587718 TMPRSS3P57727 454 aa23.79■■□□□ 1.4
CAPNS1-204ENST00000587718 PIGFQ07326 219 aa23.79■■□□□ 1.4
CAPNS1-204ENST00000587718 NR1D2Q14995 579 aa23.79■■□□□ 1.4
CAPNS1-204ENST00000587718 TCTN3Q6NUS6 607 aa23.79■■□□□ 1.4
CAPNS1-204ENST00000587718 OR8K5Q8NH50 307 aa23.79■■□□□ 1.4
CAPNS1-204ENST00000587718 CSF3RQ99062 836 aa23.79■■□□□ 1.4
CAPNS1-204ENST00000587718 COPS4Q9BT78 406 aa23.79■■□□□ 1.4
CAPNS1-204ENST00000587718 STRADBQ9C0K7 418 aa23.79■■□□□ 1.4
CAPNS1-204ENST00000587718 BAHCC1Q9P281 2608 aa23.78■■□□□ 1.4
CAPNS1-204ENST00000587718 CDK1P06493 297 aa23.78■■□□□ 1.4
CAPNS1-204ENST00000587718 NR2F1P10589 423 aa23.78■■□□□ 1.4
CAPNS1-204ENST00000587718 CRISP1P54107 249 aa23.78■■□□□ 1.4
CAPNS1-204ENST00000587718 RPS26P62854 115 aaKnown RBP23.78■■□□□ 1.4
CAPNS1-204ENST00000587718 ALDH6A1Q02252 535 aaKnown RBP23.78■■□□□ 1.4
CAPNS1-204ENST00000587718 DCST1Q5T197 706 aa23.78■■□□□ 1.4
CAPNS1-204ENST00000587718 CD300LDQ6UXZ3 194 aa23.78■■□□□ 1.4
CAPNS1-204ENST00000587718 ARHGAP22Q7Z5H3 698 aa23.78■■□□□ 1.4
CAPNS1-204ENST00000587718 ASPGQ86U10 573 aa23.78■■□□□ 1.4
CAPNS1-204ENST00000587718 SLITRK4Q8IW52 837 aa23.78■■□□□ 1.4
CAPNS1-204ENST00000587718 OR52J3Q8NH60 311 aa23.78■■□□□ 1.4
CAPNS1-204ENST00000587718 TRUB1Q8WWH5 349 aaKnown RBP23.78■■□□□ 1.4
CAPNS1-204ENST00000587718 SLC39A7Q92504 469 aa23.78■■□□□ 1.4
CAPNS1-204ENST00000587718 TM4SF19Q96DZ7 209 aa23.78■■□□□ 1.4
CAPNS1-204ENST00000587718 FUZQ9BT04 418 aa23.78■■□□□ 1.4
CAPNS1-204ENST00000587718 SRMSQ9H3Y6 488 aa23.78■■□□□ 1.4
CAPNS1-204ENST00000587718 NMNAT1Q9HAN9 279 aaPredicted RBP23.78■■□□□ 1.4
CAPNS1-204ENST00000587718 ANKHQ9HCJ1 492 aa23.78■■□□□ 1.4
CAPNS1-204ENST00000587718 RLIMQ9NVW2 624 aa23.78■■□□□ 1.4
CAPNS1-204ENST00000587718 IMPAD1Q9NX62 359 aa23.78■■□□□ 1.4
CAPNS1-204ENST00000587718 C5AR2Q9P296 337 aa23.78■■□□□ 1.4
CAPNS1-204ENST00000587718 ATG4BQ9Y4P1 393 aa23.78■■□□□ 1.4
CAPNS1-204ENST00000587718 A0A1W2PRQ8 180 aa23.78■■□□□ 1.4
CAPNS1-204ENST00000587718 J3KTA2 159 aa23.78■■□□□ 1.4
CAPNS1-204ENST00000587718 AGR2O95994 175 aa23.78■■□□□ 1.4
CAPNS1-204ENST00000587718 OR12D1P0DN82 309 aa23.78■■□□□ 1.4
CAPNS1-204ENST00000587718 OSMP13725 252 aa23.78■■□□□ 1.4
CAPNS1-204ENST00000587718 LIM2P55344 173 aa23.78■■□□□ 1.4
CAPNS1-204ENST00000587718 COX10Q12887 443 aa23.78■■□□□ 1.4
CAPNS1-204ENST00000587718 DGCR6Q14129 220 aa23.78■■□□□ 1.4
CAPNS1-204ENST00000587718 FRMPD2BQ6IN97 320 aa23.78■■□□□ 1.4
CAPNS1-204ENST00000587718 P2RY8Q86VZ1 359 aa23.78■■□□□ 1.4
CAPNS1-204ENST00000587718 SLC44A2Q8IWA5 706 aaPredicted RBP23.78■■□□□ 1.4
CAPNS1-204ENST00000587718 AQP11Q8NBQ7 271 aa23.78■■□□□ 1.4
CAPNS1-204ENST00000587718 RSC1A1Q92681 617 aa23.78■■□□□ 1.4
CAPNS1-204ENST00000587718 RAB8BQ92930 207 aa23.78■■□□□ 1.4
CAPNS1-204ENST00000587718 COL21A1Q96P44 957 aa23.78■■□□□ 1.4
CAPNS1-204ENST00000587718 PINK1Q9BXM7 581 aa23.78■■□□□ 1.4
CAPNS1-204ENST00000587718 UCK2Q9BZX2 261 aa23.78■■□□□ 1.4
CAPNS1-204ENST00000587718 RASSF1Q9NS23 344 aa23.78■■□□□ 1.4
CAPNS1-204ENST00000587718 ZNF226Q9NYT6 803 aa23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms