RNA–Protein interactions for RNA: ENST00000587338.1

SDF2-204, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-204ENST00000587338 RAI1Q7Z5J4 1906 aaPredicted RBP7.76□□□□□ -1.17
SDF2-204ENST00000587338 HEATR5AQ86XA9 2040 aa7.75□□□□□ -1.17
SDF2-204ENST00000587338 C2orf92A0A1B0GVN3 265 aa7.75□□□□□ -1.17
SDF2-204ENST00000587338 CCDC189A1A4V9 331 aa7.75□□□□□ -1.17
SDF2-204ENST00000587338 LRRC14BA6NHZ5 514 aa7.75□□□□□ -1.17
SDF2-204ENST00000587338 OR6C76A6NM76 312 aa7.75□□□□□ -1.17
SDF2-204ENST00000587338 TMEM114B3SHH9 223 aa7.75□□□□□ -1.17
SDF2-204ENST00000587338 C16orf97H3BN30 126 aa7.75□□□□□ -1.17
SDF2-204ENST00000587338 SAP18O00422 153 aaKnown RBP7.75□□□□□ -1.17
SDF2-204ENST00000587338 KLF11O14901 512 aa7.75□□□□□ -1.17
SDF2-204ENST00000587338 CD5LO43866 347 aa7.75□□□□□ -1.17
SDF2-204ENST00000587338 CCNT2O60583 730 aaKnown RBP7.75□□□□□ -1.17
SDF2-204ENST00000587338 EDF1O60869 148 aaKnown RBP7.75□□□□□ -1.17
SDF2-204ENST00000587338 PRKRAO75569 313 aaKnown RBP7.75□□□□□ -1.17
SDF2-204ENST00000587338 CRCPO75575 148 aa7.75□□□□□ -1.17
SDF2-204ENST00000587338 SOX30O94993 753 aa7.75□□□□□ -1.17
SDF2-204ENST00000587338 TROVE2P10155 538 aaKnown RBP eCLIP7.75□□□□□ -1.17
SDF2-204ENST00000587338 MTHFD2P13995 350 aa7.75□□□□□ -1.17
SDF2-204ENST00000587338 POU2F1P14859 743 aa7.75□□□□□ -1.17
SDF2-204ENST00000587338 TSPAN8P19075 237 aa7.75□□□□□ -1.17
SDF2-204ENST00000587338 IMPDH1P20839 514 aa7.75□□□□□ -1.17
SDF2-204ENST00000587338 DRD4P21917 467 aa7.75□□□□□ -1.17
SDF2-204ENST00000587338 LOXP28300 417 aaPredicted RBP7.75□□□□□ -1.17
SDF2-204ENST00000587338 CASP3P42574 277 aa7.75□□□□□ -1.17
SDF2-204ENST00000587338 SSR2P43308 183 aa7.75□□□□□ -1.17
SDF2-204ENST00000587338 SLC6A12P48065 614 aa7.75□□□□□ -1.17
SDF2-204ENST00000587338 HSPA7P48741 367 aa7.75□□□□□ -1.17
SDF2-204ENST00000587338 STARP49675 285 aa7.75□□□□□ -1.17
SDF2-204ENST00000587338 HNMTP50135 292 aa7.75□□□□□ -1.17
SDF2-204ENST00000587338 ALDH18A1P54886 795 aaKnown RBP7.75□□□□□ -1.17
SDF2-204ENST00000587338 CDH13P55290 713 aa7.75□□□□□ -1.17
SDF2-204ENST00000587338 NRG3P56975 720 aa7.75□□□□□ -1.17
SDF2-204ENST00000587338 DNAJB13P59910 316 aa7.75□□□□□ -1.17
SDF2-204ENST00000587338 EEF1A1P68104 462 aaKnown RBP7.75□□□□□ -1.17
SDF2-204ENST00000587338 SIRPAP78324 504 aa7.75□□□□□ -1.17
SDF2-204ENST00000587338 RPP38P78345 283 aaKnown RBP7.75□□□□□ -1.17
SDF2-204ENST00000587338 CDKL1Q00532 357 aa7.75□□□□□ -1.17
SDF2-204ENST00000587338 SETDB1Q15047 1291 aa7.75□□□□□ -1.17
SDF2-204ENST00000587338 AP5B1Q2VPB7 878 aa7.75□□□□□ -1.17
SDF2-204ENST00000587338 KRTAP24-1Q3LI83 254 aa7.75□□□□□ -1.17
SDF2-204ENST00000587338 ZNF678Q5SXM1 525 aa7.75□□□□□ -1.17
SDF2-204ENST00000587338 EEF1A1P5Q5VTE0 462 aa7.75□□□□□ -1.17
SDF2-204ENST00000587338 HLA-DQA1Q5Y7H0 255 aa7.75□□□□□ -1.17
SDF2-204ENST00000587338 TIGD3Q6B0B8 471 aa7.75□□□□□ -1.17
SDF2-204ENST00000587338 VWA1Q6PCB0 445 aa7.75□□□□□ -1.17
SDF2-204ENST00000587338 SCIMPQ6UWF3 145 aa7.75□□□□□ -1.17
SDF2-204ENST00000587338 ZNF704Q6ZNC4 412 aaPredicted RBP7.75□□□□□ -1.17
SDF2-204ENST00000587338 RPS27LQ71UM5 84 aaKnown RBP7.75□□□□□ -1.17
SDF2-204ENST00000587338 P4HA3Q7Z4N8 544 aa7.75□□□□□ -1.17
SDF2-204ENST00000587338 PRR22Q8IZ63 422 aa7.75□□□□□ -1.17
SDF2-204ENST00000587338 ST13P4Q8IZP2 240 aaPredicted RBP7.75□□□□□ -1.17
SDF2-204ENST00000587338 SRFBP1Q8NEF9 429 aaKnown RBP7.75□□□□□ -1.17
SDF2-204ENST00000587338 OR1J4Q8NGS1 313 aa7.75□□□□□ -1.17
SDF2-204ENST00000587338 IGFBPL1Q8WX77 278 aa7.75□□□□□ -1.17
SDF2-204ENST00000587338 RIT1Q92963 219 aa7.75□□□□□ -1.17
SDF2-204ENST00000587338 ATP6V1E2Q96A05 226 aa7.75□□□□□ -1.17
SDF2-204ENST00000587338 TMEM41AQ96HV5 264 aa7.75□□□□□ -1.17
SDF2-204ENST00000587338 MARK4Q96L34 752 aa7.75□□□□□ -1.17
SDF2-204ENST00000587338 ZNF317Q96PQ6 595 aaPredicted RBP7.75□□□□□ -1.17
SDF2-204ENST00000587338 SLC39A3Q9BRY0 314 aa7.75□□□□□ -1.17
SDF2-204ENST00000587338 TBCDQ9BTW9 1192 aa7.75□□□□□ -1.17
SDF2-204ENST00000587338 G6PC3Q9BUM1 346 aa7.75□□□□□ -1.17
SDF2-204ENST00000587338 PITHD1Q9GZP4 211 aaPredicted RBP7.75□□□□□ -1.17
SDF2-204ENST00000587338 RPF2Q9H7B2 306 aaKnown RBP7.75□□□□□ -1.17
SDF2-204ENST00000587338 METTL7AQ9H8H3 244 aa7.75□□□□□ -1.17
SDF2-204ENST00000587338 EML4Q9HC35 981 aaKnown RBP7.75□□□□□ -1.17
SDF2-204ENST00000587338 NPHS2Q9NP85 383 aa7.75□□□□□ -1.17
SDF2-204ENST00000587338 SERHLQ9NQF3 203 aa7.75□□□□□ -1.17
SDF2-204ENST00000587338 RYDENQ9NUL5 291 aaKnown RBP7.75□□□□□ -1.17
SDF2-204ENST00000587338 MARCOQ9UEW3 520 aaPredicted RBP7.75□□□□□ -1.17
SDF2-204ENST00000587338 ZNF490Q9ULM2 529 aaPredicted RBP7.75□□□□□ -1.17
SDF2-204ENST00000587338 FIS1Q9Y3D6 152 aa7.75□□□□□ -1.17
SDF2-204ENST00000587338 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.74□□□□□ -1.17
SDF2-204ENST00000587338 C2orf72A6NCS6 295 aa7.74□□□□□ -1.17
SDF2-204ENST00000587338 STX16-NPEPL1H3BU86 382 aa7.74□□□□□ -1.17
SDF2-204ENST00000587338 PLOD2O00469 737 aa7.74□□□□□ -1.17
SDF2-204ENST00000587338 STX16O14662 325 aa7.74□□□□□ -1.17
SDF2-204ENST00000587338 NPHS1O60500 1241 aa7.74□□□□□ -1.17
SDF2-204ENST00000587338 TGM6O95932 706 aa7.74□□□□□ -1.17
SDF2-204ENST00000587338 FAM107AO95990 144 aa7.74□□□□□ -1.17
SDF2-204ENST00000587338 CLPSP04118 112 aa7.74□□□□□ -1.17
SDF2-204ENST00000587338 CHRNGP07510 517 aa7.74□□□□□ -1.17
SDF2-204ENST00000587338 CD22P20273 847 aa7.74□□□□□ -1.17
SDF2-204ENST00000587338 CHMP24386 653 aa7.74□□□□□ -1.17
SDF2-204ENST00000587338 SSTR4P31391 388 aa7.74□□□□□ -1.17
SDF2-204ENST00000587338 RPS13P62277 151 aaKnown RBP7.74□□□□□ -1.17
SDF2-204ENST00000587338 RPS4XP62701 263 aaKnown RBP7.74□□□□□ -1.17
SDF2-204ENST00000587338 PCDH1Q08174 1060 aa7.74□□□□□ -1.17
SDF2-204ENST00000587338 SLAMF1Q13291 335 aa7.74□□□□□ -1.17
SDF2-204ENST00000587338 DOC2AQ14183 400 aa7.74□□□□□ -1.17
SDF2-204ENST00000587338 NNATQ16517 81 aa7.74□□□□□ -1.17
SDF2-204ENST00000587338 SPRED3Q2MJR0 410 aa7.74□□□□□ -1.17
SDF2-204ENST00000587338 UNC50Q53HI1 259 aa7.74□□□□□ -1.17
SDF2-204ENST00000587338 ARL13AQ5H913 290 aaPredicted RBP7.74□□□□□ -1.17
SDF2-204ENST00000587338 GKAP1Q5VSY0 366 aaPredicted RBP7.74□□□□□ -1.17
SDF2-204ENST00000587338 C18orf63Q68DL7 685 aa7.74□□□□□ -1.17
SDF2-204ENST00000587338 ANKRD34AQ69YU3 496 aa7.74□□□□□ -1.17
SDF2-204ENST00000587338 SULT1C3Q6IMI6 304 aa7.74□□□□□ -1.17
SDF2-204ENST00000587338 ZNF474Q6S9Z5 364 aaPredicted RBP7.74□□□□□ -1.17
SDF2-204ENST00000587338 BTLAQ7Z6A9 289 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms