RNA–Protein interactions for RNA: ENST00000586299.1

CYTH1-206, Transcript of cytohesin 1, human

Gene CYTH1, Length 4,423 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CYTH1-206	ENST00000586299	TMPRSS12	Q86WS5	348 aa		13.2	□□□□□ -0.3
CYTH1-206	ENST00000586299	GPALPP1	Q8IXQ4	340 aa		13.2	□□□□□ -0.3
CYTH1-206	ENST00000586299	TIGD4	Q8IY51	512 aa		13.2	□□□□□ -0.3
CYTH1-206	ENST00000586299	L3MBTL4	Q8NA19	623 aa		13.2	□□□□□ -0.3
CYTH1-206	ENST00000586299	TMIE	Q8NEW7	156 aa		13.2	□□□□□ -0.3
CYTH1-206	ENST00000586299	THAP4	Q8WY91	577 aa		13.2	□□□□□ -0.3
CYTH1-206	ENST00000586299	LRRN3	Q9H3W5	708 aa		13.2	□□□□□ -0.3
CYTH1-206	ENST00000586299	CHMP1A	Q9HD42	196 aa	Predicted RBP	13.2	□□□□□ -0.3
CYTH1-206	ENST00000586299	FARSA	Q9Y285	508 aa	Known RBP	13.2	□□□□□ -0.3
CYTH1-206	ENST00000586299	CARD8	Q9Y2G2	431 aa		13.2	□□□□□ -0.3
CYTH1-206	ENST00000586299		A0A0A6YYC8	382 aa	Predicted RBP	13.19	□□□□□ -0.3
CYTH1-206	ENST00000586299		I3L1I5	382 aa	Predicted RBP	13.19	□□□□□ -0.3
CYTH1-206	ENST00000586299	PPM1B	O75688	479 aa		13.19	□□□□□ -0.3
CYTH1-206	ENST00000586299	PLG	P00747	810 aa	Predicted RBP	13.19	□□□□□ -0.3
CYTH1-206	ENST00000586299	GPR143	P51810	404 aa		13.19	□□□□□ -0.3
CYTH1-206	ENST00000586299	CTBS	Q01459	385 aa		13.19	□□□□□ -0.3
CYTH1-206	ENST00000586299	ARHGAP19	Q14CB8	494 aa		13.19	□□□□□ -0.3
CYTH1-206	ENST00000586299	ZNF800	Q2TB10	664 aa	Predicted RBP eCLIP	13.19	□□□□□ -0.3
CYTH1-206	ENST00000586299		Q6ZSR6	202 aa		13.19	□□□□□ -0.3
CYTH1-206	ENST00000586299	ZNF227	Q86WZ6	799 aa		13.19	□□□□□ -0.3
CYTH1-206	ENST00000586299	HS6ST2	Q96MM7	605 aa		13.19	□□□□□ -0.3
CYTH1-206	ENST00000586299	CCDC115	Q96NT0	180 aa		13.19	□□□□□ -0.3
CYTH1-206	ENST00000586299	INSM2	Q96T92	566 aa	Predicted RBP	13.19	□□□□□ -0.3
CYTH1-206	ENST00000586299	TREX2	Q9BQ50	279 aa	Predicted RBP	13.19	□□□□□ -0.3
CYTH1-206	ENST00000586299	CA14	Q9ULX7	337 aa		13.19	□□□□□ -0.3
CYTH1-206	ENST00000586299	NUMBL	Q9Y6R0	609 aa		13.19	□□□□□ -0.3
CYTH1-206	ENST00000586299	PCP4L1	A6NKN8	68 aa		13.19	□□□□□ -0.3
CYTH1-206	ENST00000586299	NOTO	A8MTQ0	251 aa		13.19	□□□□□ -0.3
CYTH1-206	ENST00000586299	WRB	O00258	174 aa		13.19	□□□□□ -0.3
CYTH1-206	ENST00000586299	TOX	O94900	526 aa		13.19	□□□□□ -0.3
CYTH1-206	ENST00000586299	PRKCA	P17252	672 aa		13.19	□□□□□ -0.3
CYTH1-206	ENST00000586299	BORA	Q6PGQ7	559 aa		13.19	□□□□□ -0.3
CYTH1-206	ENST00000586299	LRFN4	Q6PJG9	635 aa		13.19	□□□□□ -0.3
CYTH1-206	ENST00000586299	SETD6	Q8TBK2	473 aa		13.19	□□□□□ -0.3
CYTH1-206	ENST00000586299	ZNF431	Q8TF32	576 aa	Predicted RBP	13.19	□□□□□ -0.3
CYTH1-206	ENST00000586299	RLN3	Q8WXF3	142 aa		13.19	□□□□□ -0.3
CYTH1-206	ENST00000586299	SHD	Q96IW2	340 aa		13.19	□□□□□ -0.3
CYTH1-206	ENST00000586299	MS4A4E	Q96PG1	132 aa		13.19	□□□□□ -0.3
CYTH1-206	ENST00000586299	QRSL1	Q9H0R6	528 aa	Known RBP	13.19	□□□□□ -0.3
CYTH1-206	ENST00000586299	ACOT13	Q9NPJ3	140 aa		13.19	□□□□□ -0.3
CYTH1-206	ENST00000586299	ACTR10	Q9NZ32	417 aa		13.19	□□□□□ -0.3
CYTH1-206	ENST00000586299	MRPL15	Q9P015	296 aa	Known RBP	13.19	□□□□□ -0.3
CYTH1-206	ENST00000586299	METTL21EP	A6NDL7	271 aa		13.19	□□□□□ -0.3
CYTH1-206	ENST00000586299	ZNF701	M0R085	212 aa	Predicted RBP	13.19	□□□□□ -0.3
CYTH1-206	ENST00000586299	KCNK5	O95279	499 aa		13.19	□□□□□ -0.3
CYTH1-206	ENST00000586299	PPP1R3D	O95685	299 aa		13.19	□□□□□ -0.3
CYTH1-206	ENST00000586299	CR2	P20023	1033 aa		13.19	□□□□□ -0.3
CYTH1-206	ENST00000586299	DAP	P51397	102 aa		13.19	□□□□□ -0.3
CYTH1-206	ENST00000586299	WNT4	P56705	351 aa		13.19	□□□□□ -0.3
CYTH1-206	ENST00000586299	RELA	Q04206	551 aa		13.19	□□□□□ -0.3
CYTH1-206	ENST00000586299	RPL13AP3	Q6NVV1	102 aa		13.19	□□□□□ -0.3
CYTH1-206	ENST00000586299	PODNL1	Q6PEZ8	512 aa		13.19	□□□□□ -0.3
CYTH1-206	ENST00000586299	BCL7C	Q8WUZ0	217 aa	Predicted RBP	13.19	□□□□□ -0.3
CYTH1-206	ENST00000586299	GAB3	Q8WWW8	586 aa		13.19	□□□□□ -0.3
CYTH1-206	ENST00000586299	CST11	Q9H112	138 aa		13.19	□□□□□ -0.3
CYTH1-206	ENST00000586299	FAM186A	A6NE01	2351 aa		13.19	□□□□□ -0.3
CYTH1-206	ENST00000586299		A0A1B0GTL3	188 aa		13.19	□□□□□ -0.3
CYTH1-206	ENST00000586299	HEXB	P07686	556 aa		13.19	□□□□□ -0.3
CYTH1-206	ENST00000586299	ITGA5	P08648	1049 aa		13.19	□□□□□ -0.3
CYTH1-206	ENST00000586299	MAPK3	P27361	379 aa	Predicted RBP	13.19	□□□□□ -0.3
CYTH1-206	ENST00000586299	S100G	P29377	79 aa		13.19	□□□□□ -0.3
CYTH1-206	ENST00000586299	ACTC1	P68032	377 aa		13.19	□□□□□ -0.3
CYTH1-206	ENST00000586299	ACTA1	P68133	377 aa		13.19	□□□□□ -0.3
CYTH1-206	ENST00000586299	ACVR1	Q04771	509 aa		13.19	□□□□□ -0.3
CYTH1-206	ENST00000586299	NSDHL	Q15738	373 aa		13.19	□□□□□ -0.3
CYTH1-206	ENST00000586299	METTL4	Q8N3J2	472 aa		13.19	□□□□□ -0.3
CYTH1-206	ENST00000586299	OR8J2	Q8NGG1	315 aa		13.19	□□□□□ -0.3
CYTH1-206	ENST00000586299	ADAMTS16	Q8TE57	1224 aa		13.19	□□□□□ -0.3
CYTH1-206	ENST00000586299	CMKLR1	Q99788	373 aa		13.19	□□□□□ -0.3
CYTH1-206	ENST00000586299	P2RY12	Q9H244	342 aa		13.19	□□□□□ -0.3
CYTH1-206	ENST00000586299	ZNF639	Q9UID6	485 aa		13.19	□□□□□ -0.3
CYTH1-206	ENST00000586299	SPEF1	Q9Y4P9	236 aa		13.19	□□□□□ -0.3
CYTH1-206	ENST00000586299		A0A0X1KG70	313 aa		13.18	□□□□□ -0.3
CYTH1-206	ENST00000586299	FAM221B	A6H8Z2	402 aa		13.18	□□□□□ -0.3
CYTH1-206	ENST00000586299	SGK494	L7N484	410 aa		13.18	□□□□□ -0.3
CYTH1-206	ENST00000586299	TSPAN4	O14817	238 aa		13.18	□□□□□ -0.3
CYTH1-206	ENST00000586299	B3GALT4	O96024	378 aa		13.18	□□□□□ -0.3
CYTH1-206	ENST00000586299	AK1	P00568	194 aa		13.18	□□□□□ -0.3
CYTH1-206	ENST00000586299	ARAF	P10398	606 aa		13.18	□□□□□ -0.3
CYTH1-206	ENST00000586299	SSTR4	P31391	388 aa		13.18	□□□□□ -0.3
CYTH1-206	ENST00000586299	TMEM225	Q6GV28	225 aa		13.18	□□□□□ -0.3
CYTH1-206	ENST00000586299	TANGO2	Q6ICL3	276 aa		13.18	□□□□□ -0.3
CYTH1-206	ENST00000586299	TBPL2	Q6SJ96	375 aa		13.18	□□□□□ -0.3
CYTH1-206	ENST00000586299	FOXRED2	Q8IWF2	684 aa		13.18	□□□□□ -0.3
CYTH1-206	ENST00000586299	TMEFF1	Q8IYR6	380 aa		13.18	□□□□□ -0.3
CYTH1-206	ENST00000586299	CDS1	Q92903	461 aa		13.18	□□□□□ -0.3
CYTH1-206	ENST00000586299	ZMYND19	Q96E35	227 aa	Predicted RBP	13.18	□□□□□ -0.3
CYTH1-206	ENST00000586299	TMEM41A	Q96HV5	264 aa		13.18	□□□□□ -0.3
CYTH1-206	ENST00000586299	TRPV4	Q9HBA0	871 aa		13.18	□□□□□ -0.3
CYTH1-206	ENST00000586299	TEX10	Q9NXF1	929 aa	Predicted RBP	13.18	□□□□□ -0.3
CYTH1-206	ENST00000586299	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	13.18	□□□□□ -0.3
CYTH1-206	ENST00000586299	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	13.18	□□□□□ -0.3
CYTH1-206	ENST00000586299	TRAPPC6A	O75865	159 aa		13.18	□□□□□ -0.3
CYTH1-206	ENST00000586299	CDK1	P06493	297 aa		13.18	□□□□□ -0.3
CYTH1-206	ENST00000586299	MMP12	P39900	470 aa		13.18	□□□□□ -0.3
CYTH1-206	ENST00000586299	EXOSC7	Q15024	291 aa	Known RBP	13.18	□□□□□ -0.3
CYTH1-206	ENST00000586299	GGTA1P	Q4G0N0	100 aa		13.18	□□□□□ -0.3
CYTH1-206	ENST00000586299	OLIG3	Q7RTU3	272 aa		13.18	□□□□□ -0.3
CYTH1-206	ENST00000586299	VRK2	Q86Y07	508 aa		13.18	□□□□□ -0.3
CYTH1-206	ENST00000586299	PIAS4	Q8N2W9	510 aa	Predicted RBP	13.18	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms