RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 HYAL3O43820 417 aaPredicted RBP5.76□□□□□ -1.49
LIG3-206ENST00000586058 ALOX12BO75342 701 aa5.76□□□□□ -1.49
LIG3-206ENST00000586058 DNAJB5O75953 348 aa5.76□□□□□ -1.49
LIG3-206ENST00000586058 GADD45GO95257 159 aa5.76□□□□□ -1.49
LIG3-206ENST00000586058 MED26O95402 600 aa5.76□□□□□ -1.49
LIG3-206ENST00000586058 MT-CO3P00414 261 aa5.76□□□□□ -1.49
LIG3-206ENST00000586058 FESP07332 822 aa5.76□□□□□ -1.49
LIG3-206ENST00000586058 THBS1P07996 1170 aa5.76□□□□□ -1.49
LIG3-206ENST00000586058 TFPTP0C1Z6 253 aa5.76□□□□□ -1.49
LIG3-206ENST00000586058 ACP2P11117 423 aa5.76□□□□□ -1.49
LIG3-206ENST00000586058 CD46P15529 392 aa5.76□□□□□ -1.49
LIG3-206ENST00000586058 RHCEP18577 417 aa5.76□□□□□ -1.49
LIG3-206ENST00000586058 FPR1P21462 350 aa5.76□□□□□ -1.49
LIG3-206ENST00000586058 LCN1P31025 176 aa5.76□□□□□ -1.49
LIG3-206ENST00000586058 PRKAR1BP31321 381 aa5.76□□□□□ -1.49
LIG3-206ENST00000586058 DNAJA1P31689 397 aaKnown RBP5.76□□□□□ -1.49
LIG3-206ENST00000586058 GABRA3P34903 492 aa5.76□□□□□ -1.49
LIG3-206ENST00000586058 TRHRP34981 398 aaPredicted RBP5.76□□□□□ -1.49
LIG3-206ENST00000586058 MAGEA2P43356 314 aa5.76□□□□□ -1.49
LIG3-206ENST00000586058 CLK3P49761 638 aaKnown RBP5.76□□□□□ -1.49
LIG3-206ENST00000586058 SMCPP49901 116 aaPredicted RBP5.76□□□□□ -1.49
LIG3-206ENST00000586058 MMP16P51512 607 aa5.76□□□□□ -1.49
LIG3-206ENST00000586058 EMP2P54851 167 aa5.76□□□□□ -1.49
LIG3-206ENST00000586058 PCBP3P57721 371 aaKnown RBP5.76□□□□□ -1.49
LIG3-206ENST00000586058 RGS8P57771 180 aaPredicted RBP5.76□□□□□ -1.49
LIG3-206ENST00000586058 RPS15P62841 145 aaKnown RBP5.76□□□□□ -1.49
LIG3-206ENST00000586058 RHAGQ02094 409 aa5.76□□□□□ -1.49
LIG3-206ENST00000586058 PLCXD2Q0VAA5 305 aa5.76□□□□□ -1.49
LIG3-206ENST00000586058 GPR68Q15743 365 aa5.76□□□□□ -1.49
LIG3-206ENST00000586058 DUSP5Q16690 384 aa5.76□□□□□ -1.49
LIG3-206ENST00000586058 ISXQ2M1V0 245 aa5.76□□□□□ -1.49
LIG3-206ENST00000586058 VWA2Q5GFL6 755 aa5.76□□□□□ -1.49
LIG3-206ENST00000586058 C3orf38Q5JPI3 329 aa5.76□□□□□ -1.49
LIG3-206ENST00000586058 FGD3Q5JSP0 725 aa5.76□□□□□ -1.49
LIG3-206ENST00000586058 FHL5Q5TD97 284 aa5.76□□□□□ -1.49
LIG3-206ENST00000586058 HES3Q5TGS1 186 aa5.76□□□□□ -1.49
LIG3-206ENST00000586058 STPG1Q5TH74 334 aa5.76□□□□□ -1.49
LIG3-206ENST00000586058 FAAH2Q6GMR7 532 aa5.76□□□□□ -1.49
LIG3-206ENST00000586058 DEF8Q6ZN54 512 aa5.76□□□□□ -1.49
LIG3-206ENST00000586058 PLEKHM3Q6ZWE6 761 aa5.76□□□□□ -1.49
LIG3-206ENST00000586058 RRM2BQ7LG56 351 aa5.76□□□□□ -1.49
LIG3-206ENST00000586058 OVCH1Q7RTY7 1134 aa5.76□□□□□ -1.49
LIG3-206ENST00000586058 VTCN1Q7Z7D3 282 aa5.76□□□□□ -1.49
LIG3-206ENST00000586058 B3GNT8Q7Z7M8 397 aa5.76□□□□□ -1.49
LIG3-206ENST00000586058 GALNT10Q86SR1 603 aa5.76□□□□□ -1.49
LIG3-206ENST00000586058 STK32CQ86UX6 486 aa5.76□□□□□ -1.49
LIG3-206ENST00000586058 CARM1Q86X55 608 aa5.76□□□□□ -1.49
LIG3-206ENST00000586058 C10orf111Q8N326 155 aa5.76□□□□□ -1.49
LIG3-206ENST00000586058 GALNT4Q8N4A0 578 aa5.76□□□□□ -1.49
LIG3-206ENST00000586058 LINC00471Q8N535 108 aa5.76□□□□□ -1.49
LIG3-206ENST00000586058 ESX1Q8N693 406 aa5.76□□□□□ -1.49
LIG3-206ENST00000586058 TMEM102Q8N9M5 508 aaPredicted RBP5.76□□□□□ -1.49
LIG3-206ENST00000586058 SMYD1Q8NB12 490 aa5.76□□□□□ -1.49
LIG3-206ENST00000586058 SLC16A11Q8NCK7 471 aa5.76□□□□□ -1.49
LIG3-206ENST00000586058 CHDHQ8NE62 594 aaPredicted RBP5.76□□□□□ -1.49
LIG3-206ENST00000586058 PLPP5Q8NEB5 264 aa5.76□□□□□ -1.49
LIG3-206ENST00000586058 PRSS33Q8NF86 280 aa5.76□□□□□ -1.49
LIG3-206ENST00000586058 OR5L2Q8NGL0 311 aa5.76□□□□□ -1.49
LIG3-206ENST00000586058 OR52P1PQ8NH57 321 aa5.76□□□□□ -1.49
LIG3-206ENST00000586058 VANGL1Q8TAA9 524 aaPredicted RBP5.76□□□□□ -1.49
LIG3-206ENST00000586058 SLC2A12Q8TD20 617 aa5.76□□□□□ -1.49
LIG3-206ENST00000586058 ZDHHC19Q8WVZ1 309 aaPredicted RBP5.76□□□□□ -1.49
LIG3-206ENST00000586058 TSLPQ969D9 159 aa5.76□□□□□ -1.49
LIG3-206ENST00000586058 TMBIM1Q969X1 311 aa5.76□□□□□ -1.49
LIG3-206ENST00000586058 SLCO4A1Q96BD0 722 aa5.76□□□□□ -1.49
LIG3-206ENST00000586058 TAMM41Q96BW9 452 aa5.76□□□□□ -1.49
LIG3-206ENST00000586058 CTHRC1Q96CG8 243 aa5.76□□□□□ -1.49
LIG3-206ENST00000586058 GIMAP5Q96F15 307 aa5.76□□□□□ -1.49
LIG3-206ENST00000586058 VMP1Q96GC9 406 aa5.76□□□□□ -1.49
LIG3-206ENST00000586058 C16orf58Q96GQ5 468 aa5.76□□□□□ -1.49
LIG3-206ENST00000586058 RDH12Q96NR8 316 aa5.76□□□□□ -1.49
LIG3-206ENST00000586058 EPYCQ99645 322 aa5.76□□□□□ -1.49
LIG3-206ENST00000586058 LMF2Q9BU23 707 aaKnown RBP5.76□□□□□ -1.49
LIG3-206ENST00000586058 FNDC11Q9BVV2 318 aa5.76□□□□□ -1.49
LIG3-206ENST00000586058 OSBPL11Q9BXB4 747 aa5.76□□□□□ -1.49
LIG3-206ENST00000586058 POLR2J2Q9GZM3 115 aaKnown RBP5.76□□□□□ -1.49
LIG3-206ENST00000586058 VN1R1Q9GZP7 353 aa5.76□□□□□ -1.49
LIG3-206ENST00000586058 ZNF350Q9GZX5 532 aa5.76□□□□□ -1.49
LIG3-206ENST00000586058 HOXD1Q9GZZ0 328 aa5.76□□□□□ -1.49
LIG3-206ENST00000586058 POLR2J3Q9H1A7 115 aaKnown RBP5.76□□□□□ -1.49
LIG3-206ENST00000586058 SLC26A1Q9H2B4 701 aa5.76□□□□□ -1.49
LIG3-206ENST00000586058 SOX17Q9H6I2 414 aaPredicted RBP5.76□□□□□ -1.49
LIG3-206ENST00000586058 MTHFD2LQ9H903 347 aaPredicted RBP5.76□□□□□ -1.49
LIG3-206ENST00000586058 HHATLQ9HCP6 504 aa5.76□□□□□ -1.49
LIG3-206ENST00000586058 NECTIN3Q9NQS3 549 aa5.76□□□□□ -1.49
LIG3-206ENST00000586058 LANCL2Q9NS86 450 aa5.76□□□□□ -1.49
LIG3-206ENST00000586058 SMPD3Q9NY59 655 aaPredicted RBP5.76□□□□□ -1.49
LIG3-206ENST00000586058 RPS6KB2Q9UBS0 482 aa5.76□□□□□ -1.49
LIG3-206ENST00000586058 CTSFQ9UBX1 484 aa5.76□□□□□ -1.49
LIG3-206ENST00000586058 CBLCQ9ULV8 474 aa5.76□□□□□ -1.49
LIG3-206ENST00000586058 RAB26Q9ULW5 256 aa5.76□□□□□ -1.49
LIG3-206ENST00000586058 ZNF443Q9Y2A4 671 aaPredicted RBP5.76□□□□□ -1.49
LIG3-206ENST00000586058 ASCC3Q8N3C0 2202 aaKnown RBP5.76□□□□□ -1.49
LIG3-206ENST00000586058 KNL1Q8NG31 2342 aa5.76□□□□□ -1.49
LIG3-206ENST00000586058 CPAMD8Q8IZJ3 1885 aa5.75□□□□□ -1.49
LIG3-206ENST00000586058 SDK2Q58EX2 2172 aa5.75□□□□□ -1.49
LIG3-206ENST00000586058 IGKV3D-11A0A0A0MRZ8 115 aa5.75□□□□□ -1.49
LIG3-206ENST00000586058 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.75□□□□□ -1.49
LIG3-206ENST00000586058 FRG2CA6NGY1 282 aa5.75□□□□□ -1.49
LIG3-206ENST00000586058 TNFRSF11BO00300 401 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms