RNA–Protein interactions for RNA: ENST00000584472.5

CSNK1D-223, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-223ENST00000584472 THAP3Q8WTV1 239 aaPredicted RBP14.75□□□□□ -0.05
CSNK1D-223ENST00000584472 HOXB13Q92826 284 aaPredicted RBP14.75□□□□□ -0.05
CSNK1D-223ENST00000584472 C16orf58Q96GQ5 468 aa14.75□□□□□ -0.05
CSNK1D-223ENST00000584472 SLC35G5Q96KT7 338 aa14.75□□□□□ -0.05
CSNK1D-223ENST00000584472 BARD1Q99728 777 aaKnown RBP14.75□□□□□ -0.05
CSNK1D-223ENST00000584472 SLC39A3Q9BRY0 314 aa14.75□□□□□ -0.05
CSNK1D-223ENST00000584472 ITPAQ9BY32 194 aa14.75□□□□□ -0.05
CSNK1D-223ENST00000584472 WWTR1Q9GZV5 400 aa14.75□□□□□ -0.05
CSNK1D-223ENST00000584472 EQTNQ9NQ60 294 aa14.75□□□□□ -0.05
CSNK1D-223ENST00000584472 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.75□□□□□ -0.05
CSNK1D-223ENST00000584472 SHANK1Q9Y566 2161 aa14.74□□□□□ -0.05
CSNK1D-223ENST00000584472 C2orf92A0A1B0GVN3 265 aa14.74□□□□□ -0.05
CSNK1D-223ENST00000584472 ITGA10O75578 1167 aa14.74□□□□□ -0.05
CSNK1D-223ENST00000584472 UNC5CO95185 931 aa14.74□□□□□ -0.05
CSNK1D-223ENST00000584472 KRT75O95678 551 aa14.74□□□□□ -0.05
CSNK1D-223ENST00000584472 MATN1P21941 496 aa14.74□□□□□ -0.05
CSNK1D-223ENST00000584472 MAP3K8P41279 467 aa14.74□□□□□ -0.05
CSNK1D-223ENST00000584472 CYB561P49447 251 aa14.74□□□□□ -0.05
CSNK1D-223ENST00000584472 SSR4P51571 173 aa14.74□□□□□ -0.05
CSNK1D-223ENST00000584472 MVDP53602 400 aa14.74□□□□□ -0.05
CSNK1D-223ENST00000584472 OC90Q02509 493 aaPredicted RBP14.74□□□□□ -0.05
CSNK1D-223ENST00000584472 SRSF1Q07955 248 aaKnown RBP eCLIP14.74□□□□□ -0.056e-8■■□□□ 11.5
CSNK1D-223ENST00000584472 ZNF155Q12901 538 aaPredicted RBP14.74□□□□□ -0.05
CSNK1D-223ENST00000584472 OR1C1Q15619 314 aa14.74□□□□□ -0.05
CSNK1D-223ENST00000584472 NANOGP8Q6NSW7 305 aa14.74□□□□□ -0.05
CSNK1D-223ENST00000584472 CDC73Q6P1J9 531 aa14.74□□□□□ -0.05
CSNK1D-223ENST00000584472 GPALPP1Q8IXQ4 340 aa14.74□□□□□ -0.05
CSNK1D-223ENST00000584472 CDRT4Q8N9R6 151 aa14.74□□□□□ -0.05
CSNK1D-223ENST00000584472 FBXO27Q8NI29 283 aa14.74□□□□□ -0.05
CSNK1D-223ENST00000584472 PNPT1Q8TCS8 783 aaKnown RBP14.74□□□□□ -0.05
CSNK1D-223ENST00000584472 ADIPOR1Q96A54 375 aa14.74□□□□□ -0.05
CSNK1D-223ENST00000584472 CPPED1Q9BRF8 314 aaPredicted RBP14.74□□□□□ -0.05
CSNK1D-223ENST00000584472 GPATCH1Q9BRR8 931 aaKnown RBP14.74□□□□□ -0.05
CSNK1D-223ENST00000584472 LMF2Q9BU23 707 aaKnown RBP14.74□□□□□ -0.05
CSNK1D-223ENST00000584472 ACTRT3Q9BYD9 372 aa14.74□□□□□ -0.05
CSNK1D-223ENST00000584472 SERHL2Q9H4I8 314 aa14.74□□□□□ -0.05
CSNK1D-223ENST00000584472 IKZF5Q9H5V7 419 aa14.74□□□□□ -0.05
CSNK1D-223ENST00000584472 NANOGQ9H9S0 305 aa14.74□□□□□ -0.05
CSNK1D-223ENST00000584472 SPTAN1Q13813 2472 aaKnown RBP14.74□□□□□ -0.05
CSNK1D-223ENST00000584472 EBAG9O00559 213 aa14.73□□□□□ -0.05
CSNK1D-223ENST00000584472 OR2J2O76002 312 aa14.73□□□□□ -0.05
CSNK1D-223ENST00000584472 NEURL1O76050 574 aa14.73□□□□□ -0.05
CSNK1D-223ENST00000584472 KRT16P08779 473 aa14.73□□□□□ -0.05
CSNK1D-223ENST00000584472 CT45A8P0DMV1 189 aa14.73□□□□□ -0.05
CSNK1D-223ENST00000584472 CT45A9P0DMV2 189 aa14.73□□□□□ -0.05
CSNK1D-223ENST00000584472 ACP2P11117 423 aa14.73□□□□□ -0.05
CSNK1D-223ENST00000584472 CD46P15529 392 aa14.73□□□□□ -0.05
CSNK1D-223ENST00000584472 PPIBP23284 216 aaKnown RBP14.73□□□□□ -0.05
CSNK1D-223ENST00000584472 PPICP45877 212 aa14.73□□□□□ -0.05
CSNK1D-223ENST00000584472 MAN2A2P49641 1150 aa14.73□□□□□ -0.05
CSNK1D-223ENST00000584472 CASP9P55211 416 aa14.73□□□□□ -0.05
CSNK1D-223ENST00000584472 DCAF7P61962 342 aa14.73□□□□□ -0.05
CSNK1D-223ENST00000584472 RPS26P62854 115 aaKnown RBP14.73□□□□□ -0.05
CSNK1D-223ENST00000584472 PSG6Q00889 435 aa14.73□□□□□ -0.05
CSNK1D-223ENST00000584472 BNIP1Q12981 228 aa14.73□□□□□ -0.05
CSNK1D-223ENST00000584472 CT45A2Q5DJT8 189 aa14.73□□□□□ -0.05
CSNK1D-223ENST00000584472 ZNF766Q5HY98 468 aa14.73□□□□□ -0.05
CSNK1D-223ENST00000584472 ZNF468Q5VIY5 522 aaPredicted RBP14.73□□□□□ -0.05
CSNK1D-223ENST00000584472 ANGPTL8Q6UXH0 198 aa14.73□□□□□ -0.05
CSNK1D-223ENST00000584472 NPSR1Q6W5P4 371 aa14.73□□□□□ -0.05
CSNK1D-223ENST00000584472 WDR53Q7Z5U6 358 aaPredicted RBP14.73□□□□□ -0.05
CSNK1D-223ENST00000584472 RNF130Q86XS8 419 aa14.73□□□□□ -0.05
CSNK1D-223ENST00000584472 TMEM156Q8N614 296 aa14.73□□□□□ -0.05
CSNK1D-223ENST00000584472 ZNF441Q8N8Z8 693 aa14.73□□□□□ -0.05
CSNK1D-223ENST00000584472 SLC16A11Q8NCK7 471 aa14.73□□□□□ -0.05
CSNK1D-223ENST00000584472 C17orf47Q8NEP4 570 aa14.73□□□□□ -0.05
CSNK1D-223ENST00000584472 OR52N2Q8NGI0 321 aa14.73□□□□□ -0.05
CSNK1D-223ENST00000584472 MIPOL1Q8TD10 442 aa14.73□□□□□ -0.05
CSNK1D-223ENST00000584472 SNRNP40Q96DI7 357 aaKnown RBP14.73□□□□□ -0.05
CSNK1D-223ENST00000584472 C5orf34Q96MH7 638 aa14.73□□□□□ -0.05
CSNK1D-223ENST00000584472 SIGLEC12Q96PQ1 595 aa14.73□□□□□ -0.05
CSNK1D-223ENST00000584472 BTBD9Q96Q07 612 aa14.73□□□□□ -0.05
CSNK1D-223ENST00000584472 GAL3ST4Q96RP7 486 aa14.73□□□□□ -0.05
CSNK1D-223ENST00000584472 HOPXQ9BPY8 73 aaPredicted RBP14.73□□□□□ -0.05
CSNK1D-223ENST00000584472 YIPF4Q9BSR8 244 aa14.73□□□□□ -0.05
CSNK1D-223ENST00000584472 TRIM8Q9BZR9 551 aa14.73□□□□□ -0.05
CSNK1D-223ENST00000584472 LRFN1Q9P244 771 aa14.73□□□□□ -0.05
CSNK1D-223ENST00000584472 FAF1Q9UNN5 650 aaPredicted RBP14.73□□□□□ -0.05
CSNK1D-223ENST00000584472 GPR55Q9Y2T6 319 aaPredicted RBP14.73□□□□□ -0.05
CSNK1D-223ENST00000584472 NAV2Q8IVL1 2488 aa14.73□□□□□ -0.05
CSNK1D-223ENST00000584472 EXPH5Q8NEV8 1989 aa14.73□□□□□ -0.05
CSNK1D-223ENST00000584472 TTC36A6NLP5 189 aa14.72□□□□□ -0.05
CSNK1D-223ENST00000584472 EVPLLA8MZ36 301 aa14.72□□□□□ -0.05
CSNK1D-223ENST00000584472 B2RBV5 119 aa14.72□□□□□ -0.05
CSNK1D-223ENST00000584472 WWP2O00308 870 aa14.72□□□□□ -0.05
CSNK1D-223ENST00000584472 SLC25A12O75746 678 aa14.72□□□□□ -0.05
CSNK1D-223ENST00000584472 NKX2-2O95096 273 aa14.72□□□□□ -0.05
CSNK1D-223ENST00000584472 GPX2P18283 190 aa14.72□□□□□ -0.05
CSNK1D-223ENST00000584472 DRD5P21918 477 aa14.72□□□□□ -0.05
CSNK1D-223ENST00000584472 SLC6A2P23975 617 aa14.72□□□□□ -0.05
CSNK1D-223ENST00000584472 MAGEA8P43361 318 aa14.72□□□□□ -0.05
CSNK1D-223ENST00000584472 CORO7P57737 925 aa14.72□□□□□ -0.05
CSNK1D-223ENST00000584472 MTPNP58546 118 aa14.72□□□□□ -0.05
CSNK1D-223ENST00000584472 SELPLGQ14242 412 aa14.72□□□□□ -0.05
CSNK1D-223ENST00000584472 ZNHIT3Q15649 155 aaPredicted RBP14.72□□□□□ -0.05
CSNK1D-223ENST00000584472 DUSP5Q16690 384 aa14.72□□□□□ -0.05
CSNK1D-223ENST00000584472 PRR30Q53SZ7 412 aaPredicted RBP14.72□□□□□ -0.05
CSNK1D-223ENST00000584472 COX20Q5RI15 118 aa14.72□□□□□ -0.05
CSNK1D-223ENST00000584472 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.72□□□□□ -0.05
CSNK1D-223ENST00000584472 HLA-DQA1Q5Y7H0 255 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms