RNA–Protein interactions for RNA: ENST00000582885.1

CCDC57-216, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-216ENST00000582885 FLOT2Q14254 428 aa11.12□□□□□ -0.63
CCDC57-216ENST00000582885 SYPL1Q16563 259 aa11.12□□□□□ -0.63
CCDC57-216ENST00000582885 BTBD16Q32M84 506 aa11.12□□□□□ -0.63
CCDC57-216ENST00000582885 CRB2Q5IJ48 1285 aa11.12□□□□□ -0.63
CCDC57-216ENST00000582885 HLA-DQA1Q5Y7H0 255 aa11.12□□□□□ -0.63
CCDC57-216ENST00000582885 NPSR1Q6W5P4 371 aa11.12□□□□□ -0.63
CCDC57-216ENST00000582885 LRRC74BQ6ZQY2 392 aa11.12□□□□□ -0.63
CCDC57-216ENST00000582885 C16orf62Q7Z3J2 963 aa11.12□□□□□ -0.63
CCDC57-216ENST00000582885 WDR53Q7Z5U6 358 aaPredicted RBP11.12□□□□□ -0.63
CCDC57-216ENST00000582885 PATL1Q86TB9 770 aaKnown RBP11.12□□□□□ -0.63
CCDC57-216ENST00000582885 SLC44A2Q8IWA5 706 aaPredicted RBP11.12□□□□□ -0.63
CCDC57-216ENST00000582885 AQP12AQ8IXF9 295 aa11.12□□□□□ -0.63
CCDC57-216ENST00000582885 ARMC10Q8N2F6 343 aa11.12□□□□□ -0.63
CCDC57-216ENST00000582885 COX18Q8N8Q8 333 aa11.12□□□□□ -0.63
CCDC57-216ENST00000582885 ZSCAN1Q8NBB4 408 aa11.12□□□□□ -0.63
CCDC57-216ENST00000582885 GOLM1Q8NBJ4 401 aa11.12□□□□□ -0.63
CCDC57-216ENST00000582885 ZNF248Q8NDW4 579 aa11.12□□□□□ -0.63
CCDC57-216ENST00000582885 NFKBIDQ8NI38 313 aa11.12□□□□□ -0.63
CCDC57-216ENST00000582885 SNIP1Q8TAD8 396 aaKnown RBP11.12□□□□□ -0.63
CCDC57-216ENST00000582885 BBS10Q8TAM1 723 aa11.12□□□□□ -0.63
CCDC57-216ENST00000582885 TMEM19Q96HH6 336 aa11.12□□□□□ -0.63
CCDC57-216ENST00000582885 SDF2Q99470 211 aa11.12□□□□□ -0.63
CCDC57-216ENST00000582885 TREX2Q9BQ50 279 aaPredicted RBP11.12□□□□□ -0.63
CCDC57-216ENST00000582885 DPH1Q9BZG8 443 aa11.12□□□□□ -0.63
CCDC57-216ENST00000582885 TRIM15Q9C019 465 aa11.12□□□□□ -0.63
CCDC57-216ENST00000582885 SAP130Q9H0E3 1048 aa11.12□□□□□ -0.63
CCDC57-216ENST00000582885 FBXL4Q9UKA2 621 aa11.12□□□□□ -0.63
CCDC57-216ENST00000582885 MRPS18BQ9Y676 258 aaKnown RBP11.12□□□□□ -0.63
CCDC57-216ENST00000582885 DSPPQ9NZW4 1301 aa11.11□□□□□ -0.63
CCDC57-216ENST00000582885 ACACAQ13085 2346 aa11.11□□□□□ -0.63
CCDC57-216ENST00000582885 TRBV11-1A0A0K0K1C0 115 aa11.11□□□□□ -0.63
CCDC57-216ENST00000582885 SLC28A2O43868 658 aa11.11□□□□□ -0.63
CCDC57-216ENST00000582885 NME6O75414 186 aaPredicted RBP11.11□□□□□ -0.63
CCDC57-216ENST00000582885 STX11O75558 287 aa11.11□□□□□ -0.63
CCDC57-216ENST00000582885 GCM2O75603 506 aaPredicted RBP11.11□□□□□ -0.63
CCDC57-216ENST00000582885 KCNK2O95069 426 aa11.11□□□□□ -0.63
CCDC57-216ENST00000582885 IFNA14P01570 189 aa11.11□□□□□ -0.63
CCDC57-216ENST00000582885 BCHEP06276 602 aa11.11□□□□□ -0.63
CCDC57-216ENST00000582885 SPINK2P20155 84 aa11.11□□□□□ -0.63
CCDC57-216ENST00000582885 LCN1P31025 176 aa11.11□□□□□ -0.63
CCDC57-216ENST00000582885 PIGAP37287 484 aa11.11□□□□□ -0.63
CCDC57-216ENST00000582885 MRPS22P82650 360 aaKnown RBP11.11□□□□□ -0.63
CCDC57-216ENST00000582885 DMTNQ08495 405 aa11.11□□□□□ -0.63
CCDC57-216ENST00000582885 CHAF1BQ13112 559 aa11.11□□□□□ -0.63
CCDC57-216ENST00000582885 GPAT3Q53EU6 434 aa11.11□□□□□ -0.63
CCDC57-216ENST00000582885 DCST2Q5T1A1 773 aa11.11□□□□□ -0.63
CCDC57-216ENST00000582885 H3F3CQ6NXT2 135 aa11.11□□□□□ -0.63
CCDC57-216ENST00000582885 JMJD6Q6NYC1 403 aaPredicted RBP11.11□□□□□ -0.63
CCDC57-216ENST00000582885 EID3Q8N140 333 aa11.11□□□□□ -0.63
CCDC57-216ENST00000582885 SLC15A4Q8N697 577 aa11.11□□□□□ -0.63
CCDC57-216ENST00000582885 ANKFN1Q8N957 763 aa11.11□□□□□ -0.63
CCDC57-216ENST00000582885 FBXO30Q8TB52 745 aa11.11□□□□□ -0.63
CCDC57-216ENST00000582885 WDR60Q8WVS4 1066 aa11.11□□□□□ -0.63
CCDC57-216ENST00000582885 OIT3Q8WWZ8 545 aa11.11□□□□□ -0.63
CCDC57-216ENST00000582885 THAP4Q8WY91 577 aa11.11□□□□□ -0.63
CCDC57-216ENST00000582885 FIG4Q92562 907 aa11.11□□□□□ -0.63
CCDC57-216ENST00000582885 LRGUKQ96M69 825 aa11.11□□□□□ -0.63
CCDC57-216ENST00000582885 NSMCE2Q96MF7 247 aa11.11□□□□□ -0.63
CCDC57-216ENST00000582885 RNF145Q96MT1 663 aa11.11□□□□□ -0.63
CCDC57-216ENST00000582885 ZNF607Q96SK3 696 aa11.11□□□□□ -0.63
CCDC57-216ENST00000582885 G6PC3Q9BUM1 346 aa11.11□□□□□ -0.63
CCDC57-216ENST00000582885 DEFB126Q9BYW3 111 aa11.11□□□□□ -0.63
CCDC57-216ENST00000582885 ZNF350Q9GZX5 532 aa11.11□□□□□ -0.63
CCDC57-216ENST00000582885 NXF5Q9H1B4 397 aaKnown RBP11.11□□□□□ -0.63
CCDC57-216ENST00000582885 SLC38A1Q9H2H9 487 aa11.11□□□□□ -0.63
CCDC57-216ENST00000582885 DENND2DQ9H6A0 471 aaPredicted RBP11.11□□□□□ -0.63
CCDC57-216ENST00000582885 ZNF160Q9HCG1 818 aa11.11□□□□□ -0.63
CCDC57-216ENST00000582885 OLAHQ9NV23 265 aa11.11□□□□□ -0.63
CCDC57-216ENST00000582885 MRTO4Q9UKD2 239 aaKnown RBP11.11□□□□□ -0.63
CCDC57-216ENST00000582885 CBLCQ9ULV8 474 aa11.11□□□□□ -0.63
CCDC57-216ENST00000582885 SSUH2Q9Y2M2 353 aa11.11□□□□□ -0.63
CCDC57-216ENST00000582885 RRP15Q9Y3B9 282 aaKnown RBP11.11□□□□□ -0.63
CCDC57-216ENST00000582885 GXYLT2A0PJZ3 443 aa11.1□□□□□ -0.63
CCDC57-216ENST00000582885 TMEM200CA6NKL6 621 aa11.1□□□□□ -0.63
CCDC57-216ENST00000582885 SERPINB7O75635 380 aa11.1□□□□□ -0.63
CCDC57-216ENST00000582885 H6PDO95479 791 aa11.1□□□□□ -0.63
CCDC57-216ENST00000582885 IL33O95760 270 aa11.1□□□□□ -0.63
CCDC57-216ENST00000582885 SERPINA7P05543 415 aa11.1□□□□□ -0.63
CCDC57-216ENST00000582885 CHRM4P08173 479 aa11.1□□□□□ -0.63
CCDC57-216ENST00000582885 UMPSP11172 480 aa11.1□□□□□ -0.63
CCDC57-216ENST00000582885 NCK1P16333 377 aa11.1□□□□□ -0.63
CCDC57-216ENST00000582885 NAGAP17050 411 aa11.1□□□□□ -0.63
CCDC57-216ENST00000582885 HOXB6P17509 224 aaKnown RBP11.1□□□□□ -0.63
CCDC57-216ENST00000582885 ATP6V1B2P21281 511 aa11.1□□□□□ -0.63
CCDC57-216ENST00000582885 PSMD4P55036 377 aaKnown RBP11.1□□□□□ -0.63
CCDC57-216ENST00000582885 HPCAP84074 193 aa11.1□□□□□ -0.63
CCDC57-216ENST00000582885 RHDQ02161 417 aa11.1□□□□□ -0.63
CCDC57-216ENST00000582885 ATP1A4Q13733 1029 aa11.1□□□□□ -0.63
CCDC57-216ENST00000582885 DECR1Q16698 335 aa11.1□□□□□ -0.63
CCDC57-216ENST00000582885 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.1□□□□□ -0.63
CCDC57-216ENST00000582885 FRRS1Q6ZNA5 592 aa11.1□□□□□ -0.63
CCDC57-216ENST00000582885 KRT73Q86Y46 540 aa11.1□□□□□ -0.63
CCDC57-216ENST00000582885 SLC34A3Q8N130 599 aa11.1□□□□□ -0.63
CCDC57-216ENST00000582885 BHLHE22Q8NFJ8 381 aaPredicted RBP11.1□□□□□ -0.63
CCDC57-216ENST00000582885 KCNE4Q8WWG9 221 aa11.1□□□□□ -0.63
CCDC57-216ENST00000582885 RASSF5Q8WWW0 418 aa11.1□□□□□ -0.63
CCDC57-216ENST00000582885 PIK3R3Q92569 461 aa11.1□□□□□ -0.63
CCDC57-216ENST00000582885 FAM162AQ96A26 154 aa11.1□□□□□ -0.63
CCDC57-216ENST00000582885 OTUB1Q96FW1 271 aaPredicted RBP11.1□□□□□ -0.63
CCDC57-216ENST00000582885 DUS3LQ96G46 650 aaKnown RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms