RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 CYP27C1Q4G0S4 372 aa17.8■□□□□ 0.44
SREBF1-220ENST00000581707 ATP6AP1LQ52LC2 224 aa17.8■□□□□ 0.44
SREBF1-220ENST00000581707 ZNF385BQ569K4 471 aa17.8■□□□□ 0.44
SREBF1-220ENST00000581707 TNFAIP8L3Q5GJ75 292 aa17.8■□□□□ 0.44
SREBF1-220ENST00000581707 OR10Q1Q8NGQ4 319 aa17.8■□□□□ 0.44
SREBF1-220ENST00000581707 LILRB4Q8NHJ6 448 aa17.8■□□□□ 0.44
SREBF1-220ENST00000581707 ZFP28Q8NHY6 868 aa17.8■□□□□ 0.44
SREBF1-220ENST00000581707 MTERF3Q96E29 417 aa17.8■□□□□ 0.44
SREBF1-220ENST00000581707 C3orf30Q96M34 536 aa17.8■□□□□ 0.44
SREBF1-220ENST00000581707 MAPRE3Q9UPY8 281 aa17.8■□□□□ 0.44
SREBF1-220ENST00000581707 PCDHGB3Q9Y5G1 929 aa17.8■□□□□ 0.44
SREBF1-220ENST00000581707 C19orf84I3L1E1 186 aa17.79■□□□□ 0.44
SREBF1-220ENST00000581707 SKAP2O75563 359 aaPredicted RBP17.79■□□□□ 0.44
SREBF1-220ENST00000581707 LYPLA1O75608 230 aaPredicted RBP17.79■□□□□ 0.44
SREBF1-220ENST00000581707 HSPA4LO95757 839 aa17.79■□□□□ 0.44
SREBF1-220ENST00000581707 SERPINE1P05121 402 aa17.79■□□□□ 0.44
SREBF1-220ENST00000581707 SNRPB2P08579 225 aaKnown RBP17.79■□□□□ 0.44
SREBF1-220ENST00000581707 COX6B1P14854 86 aa17.79■□□□□ 0.44
SREBF1-220ENST00000581707 GPC1P35052 558 aa17.79■□□□□ 0.44
SREBF1-220ENST00000581707 MANFP55145 182 aaKnown RBP17.79■□□□□ 0.44
SREBF1-220ENST00000581707 ZNHIT3Q15649 155 aaPredicted RBP17.79■□□□□ 0.44
SREBF1-220ENST00000581707 CHI3L2Q15782 390 aa17.79■□□□□ 0.44
SREBF1-220ENST00000581707 EIPR1Q53HC9 387 aa17.79■□□□□ 0.44
SREBF1-220ENST00000581707 CES4AQ5XG92 561 aa17.79■□□□□ 0.44
SREBF1-220ENST00000581707 R3HCC1LQ7Z5L2 792 aaKnown RBP17.79■□□□□ 0.44
SREBF1-220ENST00000581707 CCDC71Q8IV32 467 aaPredicted RBP17.79■□□□□ 0.44
SREBF1-220ENST00000581707 WDSUB1Q8N9V3 476 aa17.79■□□□□ 0.44
SREBF1-220ENST00000581707 EFHD2Q96C19 240 aaPredicted RBP17.79■□□□□ 0.44
SREBF1-220ENST00000581707 ZBED6CLQ96FA7 236 aaPredicted RBP17.79■□□□□ 0.44
SREBF1-220ENST00000581707 PGM2Q96G03 612 aa17.79■□□□□ 0.44
SREBF1-220ENST00000581707 TIMP4Q99727 224 aa17.79■□□□□ 0.44
SREBF1-220ENST00000581707 KCNK9Q9NPC2 374 aa17.79■□□□□ 0.44
SREBF1-220ENST00000581707 SERHLQ9NQF3 203 aa17.79■□□□□ 0.44
SREBF1-220ENST00000581707 SLC6A5Q9Y345 797 aa17.79■□□□□ 0.44
SREBF1-220ENST00000581707 ADGRG4Q8IZF6 3080 aa17.79■□□□□ 0.44
SREBF1-220ENST00000581707 LRBAP50851 2863 aa17.78■□□□□ 0.44
SREBF1-220ENST00000581707 ITM2AO43736 263 aa17.78■□□□□ 0.44
SREBF1-220ENST00000581707 CBR3O75828 277 aa17.78■□□□□ 0.44
SREBF1-220ENST00000581707 MYZAPP0CAP1 466 aa17.78■□□□□ 0.44
SREBF1-220ENST00000581707 PRF1P14222 555 aa17.78■□□□□ 0.44
SREBF1-220ENST00000581707 DDX5P17844 614 aaKnown RBP17.78■□□□□ 0.44
SREBF1-220ENST00000581707 PTGER4P35408 488 aa17.78■□□□□ 0.44
SREBF1-220ENST00000581707 HPCAL1P37235 193 aa17.78■□□□□ 0.44
SREBF1-220ENST00000581707 FRKP42685 505 aaPredicted RBP17.78■□□□□ 0.44
SREBF1-220ENST00000581707 KIR3DL1P43629 444 aa17.78■□□□□ 0.44
SREBF1-220ENST00000581707 CRYZQ08257 329 aaKnown RBP17.78■□□□□ 0.44
SREBF1-220ENST00000581707 GAB1Q13480 694 aa17.78■□□□□ 0.44
SREBF1-220ENST00000581707 WIPI1Q5MNZ9 446 aaPredicted RBP17.78■□□□□ 0.44
SREBF1-220ENST00000581707 C6orf136Q5SQH8 315 aa17.78■□□□□ 0.44
SREBF1-220ENST00000581707 VASNQ6EMK4 673 aa17.78■□□□□ 0.44
SREBF1-220ENST00000581707 LRIG3Q6UXM1 1119 aa17.78■□□□□ 0.44
SREBF1-220ENST00000581707 WDR53Q7Z5U6 358 aaPredicted RBP17.78■□□□□ 0.44
SREBF1-220ENST00000581707 YRDCQ86U90 279 aaKnown RBP17.78■□□□□ 0.44
SREBF1-220ENST00000581707 PLCZ1Q86YW0 608 aa17.78■□□□□ 0.44
SREBF1-220ENST00000581707 MCEMP1Q8IX19 187 aa17.78■□□□□ 0.44
SREBF1-220ENST00000581707 ULK2Q8IYT8 1036 aa17.78■□□□□ 0.44
SREBF1-220ENST00000581707 FAM83FQ8NEG4 500 aaPredicted RBP17.78■□□□□ 0.44
SREBF1-220ENST00000581707 ZNF395Q9H8N7 513 aaPredicted RBP17.78■□□□□ 0.44
SREBF1-220ENST00000581707 Q9N2J8 555 aa17.78■□□□□ 0.44
SREBF1-220ENST00000581707 ACSS1Q9NUB1 689 aaPredicted RBP17.78■□□□□ 0.44
SREBF1-220ENST00000581707 CBLCQ9ULV8 474 aa17.78■□□□□ 0.44
SREBF1-220ENST00000581707 WIF1Q9Y5W5 379 aa17.78■□□□□ 0.44
SREBF1-220ENST00000581707 ACTL7BQ9Y614 415 aa17.78■□□□□ 0.44
SREBF1-220ENST00000581707 ARHGAP21Q5T5U3 1957 aa17.78■□□□□ 0.44
SREBF1-220ENST00000581707 APCP25054 2843 aa17.77■□□□□ 0.44
SREBF1-220ENST00000581707 TTC36A6NLP5 189 aa17.77■□□□□ 0.44
SREBF1-220ENST00000581707 AHRRA9YTQ3 701 aa17.77■□□□□ 0.44
SREBF1-220ENST00000581707 ZWINTO95229 277 aa17.77■□□□□ 0.44
SREBF1-220ENST00000581707 DHRS4L1P0CG22 281 aa17.77■□□□□ 0.44
SREBF1-220ENST00000581707 PRPS2P11908 318 aa17.77■□□□□ 0.44
SREBF1-220ENST00000581707 CYP4B1P13584 511 aa17.77■□□□□ 0.44
SREBF1-220ENST00000581707 GABRA3P34903 492 aa17.77■□□□□ 0.44
SREBF1-220ENST00000581707 ABCE1P61221 599 aaKnown RBP17.77■□□□□ 0.44
SREBF1-220ENST00000581707 MPP2Q14168 576 aa17.77■□□□□ 0.44
SREBF1-220ENST00000581707 DECR1Q16698 335 aa17.77■□□□□ 0.44
SREBF1-220ENST00000581707 NHSL2Q5HYW2 709 aa17.77■□□□□ 0.44
SREBF1-220ENST00000581707 PM20D2Q8IYS1 436 aa17.77■□□□□ 0.44
SREBF1-220ENST00000581707 FNDC5Q8NAU1 212 aa17.77■□□□□ 0.44
SREBF1-220ENST00000581707 CEP70Q8NHQ1 597 aa17.77■□□□□ 0.44
SREBF1-220ENST00000581707 RNF138Q8WVD3 245 aa17.77■□□□□ 0.44
SREBF1-220ENST00000581707 TUBGCP3Q96CW5 907 aa17.77■□□□□ 0.44
SREBF1-220ENST00000581707 LMF2Q9BU23 707 aaKnown RBP17.77■□□□□ 0.44
SREBF1-220ENST00000581707 C1orf50Q9BV19 199 aa17.77■□□□□ 0.44
SREBF1-220ENST00000581707 UCK2Q9BZX2 261 aa17.77■□□□□ 0.44
SREBF1-220ENST00000581707 C3orf14Q9HBI5 128 aa17.77■□□□□ 0.44
SREBF1-220ENST00000581707 EQTNQ9NQ60 294 aa17.77■□□□□ 0.44
SREBF1-220ENST00000581707 ATP6V1HQ9UI12 483 aa17.77■□□□□ 0.44
SREBF1-220ENST00000581707 MRTO4Q9UKD2 239 aaKnown RBP17.77■□□□□ 0.44
SREBF1-220ENST00000581707 MED12Q93074 2177 aa17.77■□□□□ 0.43
SREBF1-220ENST00000581707 FAM90A27PA6NNH2 459 aa17.76■□□□□ 0.43
SREBF1-220ENST00000581707 FAM47E-STBD1D6RA91 191 aa17.76■□□□□ 0.43
SREBF1-220ENST00000581707 SCAMP2O15127 329 aaKnown RBP17.76■□□□□ 0.43
SREBF1-220ENST00000581707 BMP7P18075 431 aa17.76■□□□□ 0.43
SREBF1-220ENST00000581707 GRK2P25098 689 aa17.76■□□□□ 0.43
SREBF1-220ENST00000581707 RPL3P39023 403 aaKnown RBP17.76■□□□□ 0.43
SREBF1-220ENST00000581707 PRKAG1P54619 331 aa17.76■□□□□ 0.43
SREBF1-220ENST00000581707 IL23RQ5VWK5 629 aa17.76■□□□□ 0.43
SREBF1-220ENST00000581707 NUP43Q8NFH3 380 aa17.76■□□□□ 0.43
SREBF1-220ENST00000581707 OR7A2PQ8NGA2 310 aa17.76■□□□□ 0.43
SREBF1-220ENST00000581707 ABTB1Q969K4 478 aaPredicted RBP17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms