RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 RTN2O75298 545 aa2.08□□□□□ -2.08
SMCHD1-206ENST00000581631 ZNF853P0CG23 659 aa2.08□□□□□ -2.08
SMCHD1-206ENST00000581631 ZNF18P17022 549 aa2.08□□□□□ -2.08
SMCHD1-206ENST00000581631 MARCKSP29966 332 aaPredicted RBP2.08□□□□□ -2.08
SMCHD1-206ENST00000581631 RFC2P35250 354 aa2.08□□□□□ -2.08
SMCHD1-206ENST00000581631 RBMXP38159 391 aaKnown RBP2.08□□□□□ -2.08
SMCHD1-206ENST00000581631 SLC26A2P50443 739 aa2.08□□□□□ -2.08
SMCHD1-206ENST00000581631 CCL11P51671 97 aa2.08□□□□□ -2.08
SMCHD1-206ENST00000581631 BCL2L1Q07817 233 aa2.08□□□□□ -2.08
SMCHD1-206ENST00000581631 TEFQ10587 303 aa2.08□□□□□ -2.08
SMCHD1-206ENST00000581631 BTG3Q14201 252 aaPredicted RBP2.08□□□□□ -2.08
SMCHD1-206ENST00000581631 RAB35Q15286 201 aa2.08□□□□□ -2.08
SMCHD1-206ENST00000581631 PRR4Q16378 134 aa2.08□□□□□ -2.08
SMCHD1-206ENST00000581631 IL17AQ16552 155 aa2.08□□□□□ -2.08
SMCHD1-206ENST00000581631 CAMK4Q16566 473 aa2.08□□□□□ -2.08
SMCHD1-206ENST00000581631 ZNF699Q32M78 642 aa2.08□□□□□ -2.08
SMCHD1-206ENST00000581631 ZNF528Q3MIS6 628 aa2.08□□□□□ -2.08
SMCHD1-206ENST00000581631 PNCKQ6P2M8 343 aa2.08□□□□□ -2.08
SMCHD1-206ENST00000581631 TMEM179BQ7Z7N9 219 aa2.08□□□□□ -2.08
SMCHD1-206ENST00000581631 PARGQ86W56 976 aa2.08□□□□□ -2.08
SMCHD1-206ENST00000581631 OR10H4Q8NGA5 316 aa2.08□□□□□ -2.08
SMCHD1-206ENST00000581631 ADAMTS16Q8TE57 1224 aa2.08□□□□□ -2.08
SMCHD1-206ENST00000581631 PTP4A1Q93096 173 aa2.08□□□□□ -2.08
SMCHD1-206ENST00000581631 FAM104AQ969W3 186 aa2.08□□□□□ -2.08
SMCHD1-206ENST00000581631 PLEKHF1Q96S99 279 aa2.08□□□□□ -2.08
SMCHD1-206ENST00000581631 TSPAN18Q96SJ8 248 aa2.08□□□□□ -2.08
SMCHD1-206ENST00000581631 EBF4Q9BQW3 602 aa2.08□□□□□ -2.08
SMCHD1-206ENST00000581631 GLT8D2Q9H1C3 349 aa2.08□□□□□ -2.08
SMCHD1-206ENST00000581631 TMEM245Q9H330 911 aa2.08□□□□□ -2.08
SMCHD1-206ENST00000581631 EHD1Q9H4M9 534 aa2.08□□□□□ -2.08
SMCHD1-206ENST00000581631 KCNMB3Q9NPA1 279 aa2.08□□□□□ -2.08
SMCHD1-206ENST00000581631 ELOVL2Q9NXB9 296 aa2.08□□□□□ -2.08
SMCHD1-206ENST00000581631 CWC25Q9NXE8 425 aaPredicted RBP2.08□□□□□ -2.08
SMCHD1-206ENST00000581631 LHX3Q9UBR4 397 aa2.08□□□□□ -2.08
SMCHD1-206ENST00000581631 ZNF221Q9UK13 617 aa2.08□□□□□ -2.08
SMCHD1-206ENST00000581631 FKBP7Q9Y680 259 aa2.08□□□□□ -2.08
SMCHD1-206ENST00000581631 ARHGAP23Q9P227 1491 aa2.07□□□□□ -2.08
SMCHD1-206ENST00000581631 IGKV6-21A0A0C4DH24 114 aa2.07□□□□□ -2.08
SMCHD1-206ENST00000581631 A0A0U1RQG5 324 aaPredicted RBP2.07□□□□□ -2.08
SMCHD1-206ENST00000581631 NPIPA2E9PIF3 369 aa2.07□□□□□ -2.08
SMCHD1-206ENST00000581631 TLR4O00206 839 aa2.07□□□□□ -2.08
SMCHD1-206ENST00000581631 NME2P1O60361 137 aa2.07□□□□□ -2.08
SMCHD1-206ENST00000581631 FMO6PO60774 539 aa2.07□□□□□ -2.08
SMCHD1-206ENST00000581631 ZNF254O75437 659 aa2.07□□□□□ -2.08
SMCHD1-206ENST00000581631 PGK2P07205 417 aa2.07□□□□□ -2.08
SMCHD1-206ENST00000581631 ASNSP08243 561 aa2.07□□□□□ -2.08
SMCHD1-206ENST00000581631 CYP11B1P15538 503 aa2.07□□□□□ -2.08
SMCHD1-206ENST00000581631 TMOD1P28289 359 aa2.07□□□□□ -2.08
SMCHD1-206ENST00000581631 NF2P35240 595 aa2.07□□□□□ -2.08
SMCHD1-206ENST00000581631 STK19P49842 368 aaPredicted RBP2.07□□□□□ -2.08
SMCHD1-206ENST00000581631 CNN1P51911 297 aaKnown RBP2.07□□□□□ -2.08
SMCHD1-206ENST00000581631 CASP9P55211 416 aa2.07□□□□□ -2.08
SMCHD1-206ENST00000581631 C17orf67Q0P5P2 114 aa2.07□□□□□ -2.08
SMCHD1-206ENST00000581631 XKR4Q5GH76 650 aa2.07□□□□□ -2.08
SMCHD1-206ENST00000581631 ZNF57Q68EA5 555 aaPredicted RBP2.07□□□□□ -2.08
SMCHD1-206ENST00000581631 ZCCHC12Q6PEW1 402 aa2.07□□□□□ -2.08
SMCHD1-206ENST00000581631 IYDQ6PHW0 289 aa2.07□□□□□ -2.08
SMCHD1-206ENST00000581631 TOM1L2Q6ZVM7 507 aa2.07□□□□□ -2.08
SMCHD1-206ENST00000581631 TRPM8Q7Z2W7 1104 aa2.07□□□□□ -2.08
SMCHD1-206ENST00000581631 KRT77Q7Z794 578 aa2.07□□□□□ -2.08
SMCHD1-206ENST00000581631 ZNF410Q86VK4 478 aa2.07□□□□□ -2.08
SMCHD1-206ENST00000581631 MKXQ8IYA7 352 aa2.07□□□□□ -2.08
SMCHD1-206ENST00000581631 CENPSQ8N2Z9 138 aa2.07□□□□□ -2.08
SMCHD1-206ENST00000581631 COLGALT1Q8NBJ5 622 aa2.07□□□□□ -2.08
SMCHD1-206ENST00000581631 C2orf40Q9H1Z8 148 aa2.07□□□□□ -2.08
SMCHD1-206ENST00000581631 ABCG8Q9H221 673 aa2.07□□□□□ -2.08
SMCHD1-206ENST00000581631 FAM114A2Q9NRY5 505 aa2.07□□□□□ -2.08
SMCHD1-206ENST00000581631 DCAF13Q9NV06 445 aaKnown RBP2.07□□□□□ -2.08
SMCHD1-206ENST00000581631 MBD2Q9UBB5 411 aa2.07□□□□□ -2.08
SMCHD1-206ENST00000581631 DHRS7Q9Y394 339 aa2.07□□□□□ -2.08
SMCHD1-206ENST00000581631 MACROD2A1Z1Q3 448 aa2.06□□□□□ -2.08
SMCHD1-206ENST00000581631 TRIM49D1C9J1S8 452 aa2.06□□□□□ -2.08
SMCHD1-206ENST00000581631 BUB1O43683 1085 aa2.06□□□□□ -2.08
SMCHD1-206ENST00000581631 CXCL14O95715 111 aa2.06□□□□□ -2.08
SMCHD1-206ENST00000581631 IGFBP1P08833 259 aaPredicted RBP2.06□□□□□ -2.08
SMCHD1-206ENST00000581631 CAV2P51636 162 aa2.06□□□□□ -2.08
SMCHD1-206ENST00000581631 RPL32P62910 135 aaKnown RBP2.06□□□□□ -2.08
SMCHD1-206ENST00000581631 MECOMQ03112 1051 aa2.06□□□□□ -2.08
SMCHD1-206ENST00000581631 UBXN1Q04323 297 aa2.06□□□□□ -2.08
SMCHD1-206ENST00000581631 PPP1R8Q12972 351 aaKnown RBP2.06□□□□□ -2.08
SMCHD1-206ENST00000581631 CCDC14Q49A88 953 aa2.06□□□□□ -2.08
SMCHD1-206ENST00000581631 LIPKQ5VXJ0 399 aa2.06□□□□□ -2.08
SMCHD1-206ENST00000581631 Q6P435 159 aa2.06□□□□□ -2.08
SMCHD1-206ENST00000581631 YRDCQ86U90 279 aaKnown RBP2.06□□□□□ -2.08
SMCHD1-206ENST00000581631 AMZ2Q86W34 360 aa2.06□□□□□ -2.08
SMCHD1-206ENST00000581631 GPBP1Q86WP2 473 aa2.06□□□□□ -2.08
SMCHD1-206ENST00000581631 CSNK1A1LQ8N752 337 aa2.06□□□□□ -2.08
SMCHD1-206ENST00000581631 Q8N9L7 120 aa2.06□□□□□ -2.08
SMCHD1-206ENST00000581631 ZNF397Q8NF99 534 aaPredicted RBP2.06□□□□□ -2.08
SMCHD1-206ENST00000581631 ATP6V1E2Q96A05 226 aa2.06□□□□□ -2.08
SMCHD1-206ENST00000581631 C18orf25Q96B23 403 aaPredicted RBP2.06□□□□□ -2.08
SMCHD1-206ENST00000581631 DTD2Q96FN9 168 aa2.06□□□□□ -2.08
SMCHD1-206ENST00000581631 NOL4LQ96MY1 436 aaPredicted RBP2.06□□□□□ -2.08
SMCHD1-206ENST00000581631 CARD6Q9BX69 1037 aa2.06□□□□□ -2.08
SMCHD1-206ENST00000581631 CCSER1Q9C0I3 900 aa2.06□□□□□ -2.08
SMCHD1-206ENST00000581631 FAM124BQ9H5Z6 455 aaPredicted RBP2.06□□□□□ -2.08
SMCHD1-206ENST00000581631 PTGES2Q9H7Z7 377 aa2.06□□□□□ -2.08
SMCHD1-206ENST00000581631 FAM153AQ9UHL3 310 aa2.06□□□□□ -2.08
SMCHD1-206ENST00000581631 USP6P35125 1406 aa2.06□□□□□ -2.08
SMCHD1-206ENST00000581631 CHD4Q14839 1912 aa2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms