RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 CARD6Q9BX69 1037 aa3.64□□□□□ -1.83
SMCHD1-205ENST00000581383 CCSER1Q9C0I3 900 aa3.64□□□□□ -1.83
SMCHD1-205ENST00000581383 ZBP1Q9H171 429 aa3.64□□□□□ -1.83
SMCHD1-205ENST00000581383 RPAP3Q9H6T3 665 aaPredicted RBP3.64□□□□□ -1.83
SMCHD1-205ENST00000581383 TRPV5Q9NQA5 729 aa3.64□□□□□ -1.83
SMCHD1-205ENST00000581383 CUTCQ9NTM9 273 aa3.64□□□□□ -1.83
SMCHD1-205ENST00000581383 DUS2Q9NX74 493 aaKnown RBP3.64□□□□□ -1.83
SMCHD1-205ENST00000581383 RAI14Q9P0K7 980 aa3.64□□□□□ -1.83
SMCHD1-205ENST00000581383 ANKMY1Q9P2S6 941 aa3.64□□□□□ -1.83
SMCHD1-205ENST00000581383 PRODH2Q9UF12 536 aa3.64□□□□□ -1.83
SMCHD1-205ENST00000581383 AURKCQ9UQB9 309 aa3.64□□□□□ -1.83
SMCHD1-205ENST00000581383 COL5A2P05997 1499 aaPredicted RBP3.63□□□□□ -1.83
SMCHD1-205ENST00000581383 A0A087WWV3 80 aa3.63□□□□□ -1.83
SMCHD1-205ENST00000581383 A0A0U1RQV5 110 aa3.63□□□□□ -1.83
SMCHD1-205ENST00000581383 RNF222A6NCQ9 220 aa3.63□□□□□ -1.83
SMCHD1-205ENST00000581383 ZNF840PA6NDX5 716 aa3.63□□□□□ -1.83
SMCHD1-205ENST00000581383 F8WDY8 70 aa3.63□□□□□ -1.83
SMCHD1-205ENST00000581383 ALOX15BO15296 676 aa3.63□□□□□ -1.83
SMCHD1-205ENST00000581383 KBTBD11O94819 623 aa3.63□□□□□ -1.83
SMCHD1-205ENST00000581383 DIRAS3O95661 229 aa3.63□□□□□ -1.83
SMCHD1-205ENST00000581383 IFNB1P01574 187 aa3.63□□□□□ -1.83
SMCHD1-205ENST00000581383 ANXA4P09525 319 aaPredicted RBP3.63□□□□□ -1.83
SMCHD1-205ENST00000581383 PVRP15151 417 aa3.63□□□□□ -1.83
SMCHD1-205ENST00000581383 HSF2Q03933 536 aa3.63□□□□□ -1.83
SMCHD1-205ENST00000581383 PDZK1IP1Q13113 114 aa3.63□□□□□ -1.83
SMCHD1-205ENST00000581383 SCGB2A2Q13296 93 aa3.63□□□□□ -1.83
SMCHD1-205ENST00000581383 EXOSC2Q13868 293 aaKnown RBP3.63□□□□□ -1.83
SMCHD1-205ENST00000581383 RAB35Q15286 201 aa3.63□□□□□ -1.83
SMCHD1-205ENST00000581383 PPP1R3AQ16821 1122 aa3.63□□□□□ -1.83
SMCHD1-205ENST00000581383 SLC39A4Q6P5W5 647 aa3.63□□□□□ -1.83
SMCHD1-205ENST00000581383 HACD2Q6Y1H2 254 aa3.63□□□□□ -1.83
SMCHD1-205ENST00000581383 ZNF600Q6ZNG1 722 aa3.63□□□□□ -1.83
SMCHD1-205ENST00000581383 RFESDQ8TAC1 157 aa3.63□□□□□ -1.83
SMCHD1-205ENST00000581383 ART4Q93070 314 aa3.63□□□□□ -1.83
SMCHD1-205ENST00000581383 TADA1Q96BN2 335 aa3.63□□□□□ -1.83
SMCHD1-205ENST00000581383 ZBED6CLQ96FA7 236 aaPredicted RBP3.63□□□□□ -1.83
SMCHD1-205ENST00000581383 TIGARQ9NQ88 270 aa3.63□□□□□ -1.83
SMCHD1-205ENST00000581383 CLEC5AQ9NY25 188 aa3.63□□□□□ -1.83
SMCHD1-205ENST00000581383 FOXJ3Q9UPW0 622 aa3.63□□□□□ -1.83
SMCHD1-205ENST00000581383 RNF115Q9Y4L5 304 aa3.63□□□□□ -1.83
SMCHD1-205ENST00000581383 TRIM49BA6NDI0 452 aa3.62□□□□□ -1.83
SMCHD1-205ENST00000581383 FBLL1A6NHQ2 334 aaKnown RBP3.62□□□□□ -1.83
SMCHD1-205ENST00000581383 SMPD2O60906 423 aa3.62□□□□□ -1.83
SMCHD1-205ENST00000581383 NCF1P14598 390 aaPredicted RBP3.62□□□□□ -1.83
SMCHD1-205ENST00000581383 IDSP22304 550 aa3.62□□□□□ -1.83
SMCHD1-205ENST00000581383 CYP2F1P24903 491 aa3.62□□□□□ -1.83
SMCHD1-205ENST00000581383 RPL34P49207 117 aaKnown RBP3.62□□□□□ -1.83
SMCHD1-205ENST00000581383 STK19P49842 368 aaPredicted RBP3.62□□□□□ -1.83
SMCHD1-205ENST00000581383 IL9RQ01113 521 aa3.62□□□□□ -1.83
SMCHD1-205ENST00000581383 PRKCEQ02156 737 aa3.62□□□□□ -1.83
SMCHD1-205ENST00000581383 SLC10A1Q14973 349 aa3.62□□□□□ -1.83
SMCHD1-205ENST00000581383 MICAQ29983 383 aa3.62□□□□□ -1.83
SMCHD1-205ENST00000581383 TTC31Q49AM3 519 aaPredicted RBP3.62□□□□□ -1.83
SMCHD1-205ENST00000581383 ARSKQ6UWY0 536 aa3.62□□□□□ -1.83
SMCHD1-205ENST00000581383 CCBE1Q6UXH8 406 aaPredicted RBP3.62□□□□□ -1.83
SMCHD1-205ENST00000581383 NAXDQ8IW45 347 aa3.62□□□□□ -1.83
SMCHD1-205ENST00000581383 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.62□□□□□ -1.83
SMCHD1-205ENST00000581383 AGAP11Q8TF27 550 aa3.62□□□□□ -1.83
SMCHD1-205ENST00000581383 C16orf45Q96MC5 204 aaPredicted RBP3.62□□□□□ -1.83
SMCHD1-205ENST00000581383 C1orf147Q96MC9 270 aaPredicted RBP3.62□□□□□ -1.83
SMCHD1-205ENST00000581383 FOXN4Q96NZ1 517 aa3.62□□□□□ -1.83
SMCHD1-205ENST00000581383 DPH5Q9H2P9 285 aa3.62□□□□□ -1.83
SMCHD1-205ENST00000581383 LIN28AQ9H9Z2 209 aaKnown RBP3.62□□□□□ -1.83
SMCHD1-205ENST00000581383 POLE3Q9NRF9 147 aa3.62□□□□□ -1.83
SMCHD1-205ENST00000581383 C1orf123Q9NWV4 160 aa3.62□□□□□ -1.83
SMCHD1-205ENST00000581383 ATP6V1HQ9UI12 483 aa3.62□□□□□ -1.83
SMCHD1-205ENST00000581383 BARX2Q9UMQ3 279 aaPredicted RBP3.62□□□□□ -1.83
SMCHD1-205ENST00000581383 PARD3Q8TEW0 1356 aa3.62□□□□□ -1.83
SMCHD1-205ENST00000581383 EFCAB7A8K855 629 aa3.61□□□□□ -1.83
SMCHD1-205ENST00000581383 WASH3PC4AMC7 463 aa3.61□□□□□ -1.83
SMCHD1-205ENST00000581383 K7EPI3 171 aa3.61□□□□□ -1.83
SMCHD1-205ENST00000581383 CASKO14936 926 aa3.61□□□□□ -1.83
SMCHD1-205ENST00000581383 CHADO15335 359 aa3.61□□□□□ -1.83
SMCHD1-205ENST00000581383 LANCL1O43813 399 aa3.61□□□□□ -1.83
SMCHD1-205ENST00000581383 ZNF354AO60765 605 aaPredicted RBP3.61□□□□□ -1.83
SMCHD1-205ENST00000581383 RHBDL1O75783 438 aa3.61□□□□□ -1.83
SMCHD1-205ENST00000581383 PRAMEF12O95522 483 aa3.61□□□□□ -1.83
SMCHD1-205ENST00000581383 AK1P00568 194 aa3.61□□□□□ -1.83
SMCHD1-205ENST00000581383 ALPIP09923 528 aa3.61□□□□□ -1.83
SMCHD1-205ENST00000581383 ADRA1AP35348 466 aa3.61□□□□□ -1.83
SMCHD1-205ENST00000581383 PTGFRP43088 359 aa3.61□□□□□ -1.83
SMCHD1-205ENST00000581383 PTGER3P43115 390 aa3.61□□□□□ -1.83
SMCHD1-205ENST00000581383 ARHGDIBP52566 201 aa3.61□□□□□ -1.83
SMCHD1-205ENST00000581383 METAP1P53582 386 aa3.61□□□□□ -1.83
SMCHD1-205ENST00000581383 RUNX3Q13761 415 aa3.61□□□□□ -1.83
SMCHD1-205ENST00000581383 TFDP1Q14186 410 aa3.61□□□□□ -1.83
SMCHD1-205ENST00000581383 TRIP10Q15642 601 aa3.61□□□□□ -1.83
SMCHD1-205ENST00000581383 UBE2V2Q15819 145 aa3.61□□□□□ -1.83
SMCHD1-205ENST00000581383 C15orf32Q32M92 178 aa3.61□□□□□ -1.83
SMCHD1-205ENST00000581383 HSP90AA5PQ58FG0 334 aa3.61□□□□□ -1.83
SMCHD1-205ENST00000581383 SLX4IPQ5VYV7 408 aa3.61□□□□□ -1.83
SMCHD1-205ENST00000581383 BTNL3Q6UXE8 466 aa3.61□□□□□ -1.83
SMCHD1-205ENST00000581383 WASH2PQ6VEQ5 465 aa3.61□□□□□ -1.83
SMCHD1-205ENST00000581383 UNC5CLQ8IV45 518 aa3.61□□□□□ -1.83
SMCHD1-205ENST00000581383 EFCAB13Q8IY85 973 aa3.61□□□□□ -1.83
SMCHD1-205ENST00000581383 ZBTB44Q8NCP5 570 aa3.61□□□□□ -1.83
SMCHD1-205ENST00000581383 RHOXF1Q8NHV9 184 aa3.61□□□□□ -1.83
SMCHD1-205ENST00000581383 FNDC8Q8TC99 324 aa3.61□□□□□ -1.83
SMCHD1-205ENST00000581383 ADIPOR1Q96A54 375 aa3.61□□□□□ -1.83
SMCHD1-205ENST00000581383 PINX1Q96BK5 328 aaKnown RBP3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms