RNA–Protein interactions for RNA: ENST00000580646.5

GGA3-209, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-209ENST00000580646 CLECL1Q8IZS7 167 aa9.11□□□□□ -0.95
GGA3-209ENST00000580646 TMEM156Q8N614 296 aa9.11□□□□□ -0.95
GGA3-209ENST00000580646 TRIML2Q8N7C3 387 aa9.11□□□□□ -0.95
GGA3-209ENST00000580646 SIMC1Q8NDZ2 872 aa9.11□□□□□ -0.95
GGA3-209ENST00000580646 NUP43Q8NFH3 380 aa9.11□□□□□ -0.95
GGA3-209ENST00000580646 OR9I1Q8NGQ6 314 aa9.11□□□□□ -0.95
GGA3-209ENST00000580646 THAP3Q8WTV1 239 aaPredicted RBP9.11□□□□□ -0.95
GGA3-209ENST00000580646 NUDT8Q8WV74 236 aa9.11□□□□□ -0.95
GGA3-209ENST00000580646 SCMH1Q96GD3 660 aa9.11□□□□□ -0.95
GGA3-209ENST00000580646 PHF12Q96QT6 1004 aa9.11□□□□□ -0.95
GGA3-209ENST00000580646 GAL3ST4Q96RP7 486 aa9.11□□□□□ -0.95
GGA3-209ENST00000580646 SECISBP2Q96T21 854 aaKnown RBP9.11□□□□□ -0.95
GGA3-209ENST00000580646 STACQ99469 402 aa9.11□□□□□ -0.95
GGA3-209ENST00000580646 ITPAQ9BY32 194 aa9.11□□□□□ -0.95
GGA3-209ENST00000580646 HES7Q9BYE0 225 aa9.11□□□□□ -0.95
GGA3-209ENST00000580646 CXorf36Q9H7Y0 433 aa9.11□□□□□ -0.95
GGA3-209ENST00000580646 SLC24A3Q9HC58 644 aa9.11□□□□□ -0.95
GGA3-209ENST00000580646 SLC52A3Q9NQ40 469 aa9.11□□□□□ -0.95
GGA3-209ENST00000580646 SERHLQ9NQF3 203 aa9.11□□□□□ -0.95
GGA3-209ENST00000580646 KLHL1Q9NR64 748 aa9.11□□□□□ -0.95
GGA3-209ENST00000580646 ZCCHC3Q9NUD5 404 aaKnown RBP9.11□□□□□ -0.95
GGA3-209ENST00000580646 LRFN1Q9P244 771 aa9.11□□□□□ -0.95
GGA3-209ENST00000580646 ICE1Q9Y2F5 2266 aa9.11□□□□□ -0.95
GGA3-209ENST00000580646 NINQ8N4C6 2090 aa9.11□□□□□ -0.95
GGA3-209ENST00000580646 A0A1W2PP18 115 aa9.1□□□□□ -0.95
GGA3-209ENST00000580646 A1L4Q6 167 aa9.1□□□□□ -0.95
GGA3-209ENST00000580646 A8MVJ9 347 aa9.1□□□□□ -0.95
GGA3-209ENST00000580646 CCDC22O60826 627 aa9.1□□□□□ -0.95
GGA3-209ENST00000580646 ABCB7O75027 752 aa9.1□□□□□ -0.95
GGA3-209ENST00000580646 NEURL1O76050 574 aa9.1□□□□□ -0.95
GGA3-209ENST00000580646 NKX2-2O95096 273 aa9.1□□□□□ -0.95
GGA3-209ENST00000580646 STSP08842 583 aa9.1□□□□□ -0.95
GGA3-209ENST00000580646 MST1P26927 711 aa9.1□□□□□ -0.95
GGA3-209ENST00000580646 ABCD3P28288 659 aa9.1□□□□□ -0.95
GGA3-209ENST00000580646 SOX3P41225 446 aa9.1□□□□□ -0.95
GGA3-209ENST00000580646 TRPC1P48995 793 aa9.1□□□□□ -0.95
GGA3-209ENST00000580646 NR0B1P51843 470 aaKnown RBP9.1□□□□□ -0.95
GGA3-209ENST00000580646 DGKQP52824 942 aa9.1□□□□□ -0.95
GGA3-209ENST00000580646 PMP22Q01453 160 aa9.1□□□□□ -0.95
GGA3-209ENST00000580646 ZNF155Q12901 538 aaPredicted RBP9.1□□□□□ -0.95
GGA3-209ENST00000580646 TMED1Q13445 227 aa9.1□□□□□ -0.95
GGA3-209ENST00000580646 NTRK2Q16620 822 aa9.1□□□□□ -0.95
GGA3-209ENST00000580646 ZNF791Q3KP31 576 aaPredicted RBP9.1□□□□□ -0.95
GGA3-209ENST00000580646 COQ5Q5HYK3 327 aa9.1□□□□□ -0.95
GGA3-209ENST00000580646 ZNF468Q5VIY5 522 aaPredicted RBP9.1□□□□□ -0.95
GGA3-209ENST00000580646 HIST2H2BCQ6DN03 193 aa9.1□□□□□ -0.95
GGA3-209ENST00000580646 SLC25A25Q6KCM7 469 aa9.1□□□□□ -0.95
GGA3-209ENST00000580646 MFSD12Q6NUT3 480 aa9.1□□□□□ -0.95
GGA3-209ENST00000580646 CDC73Q6P1J9 531 aa9.1□□□□□ -0.95
GGA3-209ENST00000580646 RTL4Q6ZR62 310 aa9.1□□□□□ -0.95
GGA3-209ENST00000580646 RINLQ6ZS11 566 aa9.1□□□□□ -0.95
GGA3-209ENST00000580646 PIGWQ7Z7B1 504 aa9.1□□□□□ -0.95
GGA3-209ENST00000580646 ZNF227Q86WZ6 799 aa9.1□□□□□ -0.95
GGA3-209ENST00000580646 SLC34A3Q8N130 599 aa9.1□□□□□ -0.95
GGA3-209ENST00000580646 CYP4Z2PQ8N1L4 340 aa9.1□□□□□ -0.95
GGA3-209ENST00000580646 TMEM178AQ8NBL3 297 aa9.1□□□□□ -0.95
GGA3-209ENST00000580646 OR4A15Q8NGL6 344 aa9.1□□□□□ -0.95
GGA3-209ENST00000580646 DOK4Q8TEW6 326 aa9.1□□□□□ -0.95
GGA3-209ENST00000580646 SPACA9Q96E40 222 aaPredicted RBP9.1□□□□□ -0.95
GGA3-209ENST00000580646 SPDL1Q96EA4 605 aa9.1□□□□□ -0.95
GGA3-209ENST00000580646 SLC35A4Q96G79 324 aa9.1□□□□□ -0.95
GGA3-209ENST00000580646 ITCHQ96J02 903 aa9.1□□□□□ -0.95
GGA3-209ENST00000580646 PANX1Q96RD7 426 aa9.1□□□□□ -0.95
GGA3-209ENST00000580646 ACTRT3Q9BYD9 372 aa9.1□□□□□ -0.95
GGA3-209ENST00000580646 NXF5Q9H1B4 397 aaKnown RBP9.1□□□□□ -0.95
GGA3-209ENST00000580646 ANKRA2Q9H9E1 313 aa9.1□□□□□ -0.95
GGA3-209ENST00000580646 Q9N2J8 555 aa9.1□□□□□ -0.95
GGA3-209ENST00000580646 SH2D2AQ9NP31 389 aa9.1□□□□□ -0.95
GGA3-209ENST00000580646 DUSP22Q9NRW4 184 aa9.1□□□□□ -0.95
GGA3-209ENST00000580646 GPATCH2Q9NW75 528 aa9.1□□□□□ -0.95
GGA3-209ENST00000580646 HPF1Q9NWY4 346 aa9.1□□□□□ -0.95
GGA3-209ENST00000580646 CCDC167Q9P0B6 97 aa9.1□□□□□ -0.95
GGA3-209ENST00000580646 SEC14L3Q9UDX4 400 aa9.1□□□□□ -0.95
GGA3-209ENST00000580646 ERVK-11Q9UQG0 969 aa9.1□□□□□ -0.95
GGA3-209ENST00000580646 SNX8Q9Y5X2 465 aa9.1□□□□□ -0.95
GGA3-209ENST00000580646 NPFFR2Q9Y5X5 522 aa9.1□□□□□ -0.95
GGA3-209ENST00000580646 GMEB1Q9Y692 573 aa9.1□□□□□ -0.95
GGA3-209ENST00000580646 A0A1B0GUH1 482 aa9.09□□□□□ -0.95
GGA3-209ENST00000580646 ASPDHA6ND91 283 aa9.09□□□□□ -0.95
GGA3-209ENST00000580646 CCDC154A6NI56 674 aa9.09□□□□□ -0.95
GGA3-209ENST00000580646 OR6C70A6NIJ9 312 aa9.09□□□□□ -0.95
GGA3-209ENST00000580646 DUXAA6NLW8 204 aa9.09□□□□□ -0.95
GGA3-209ENST00000580646 PDLIM1O00151 329 aa9.09□□□□□ -0.95
GGA3-209ENST00000580646 RFXANKO14593 260 aa9.09□□□□□ -0.95
GGA3-209ENST00000580646 TP53I11O14683 189 aa9.09□□□□□ -0.95
GGA3-209ENST00000580646 ASNA1O43681 348 aa9.09□□□□□ -0.95
GGA3-209ENST00000580646 AHCYL1O43865 530 aa9.09□□□□□ -0.95
GGA3-209ENST00000580646 ZNF354AO60765 605 aaPredicted RBP9.09□□□□□ -0.95
GGA3-209ENST00000580646 PPM1BO75688 479 aa9.09□□□□□ -0.95
GGA3-209ENST00000580646 SLC25A12O75746 678 aa9.09□□□□□ -0.95
GGA3-209ENST00000580646 WISP2O76076 250 aa9.09□□□□□ -0.95
GGA3-209ENST00000580646 OR6B1O95007 311 aa9.09□□□□□ -0.95
GGA3-209ENST00000580646 UNC5CO95185 931 aa9.09□□□□□ -0.95
GGA3-209ENST00000580646 AGR2O95994 175 aa9.09□□□□□ -0.95
GGA3-209ENST00000580646 HMGN2P05204 90 aaKnown RBP9.09□□□□□ -0.95
GGA3-209ENST00000580646 SP1P08047 785 aa9.09□□□□□ -0.95
GGA3-209ENST00000580646 EFNA1P20827 205 aaPredicted RBP9.09□□□□□ -0.95
GGA3-209ENST00000580646 PTPN6P29350 595 aa9.09□□□□□ -0.95
GGA3-209ENST00000580646 LCN1P31025 176 aa9.09□□□□□ -0.95
GGA3-209ENST00000580646 PNLIPRP2P54317 469 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms