RNA–Protein interactions for RNA: ENST00000580556.5

CCDC84-209, Transcript of coiled-coil domain containing 84, humanhuman

TSL 3

Gene CCDC84, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-209ENST00000580556 PSG6Q00889 435 aa11.21□□□□□ -0.61
CCDC84-209ENST00000580556 FADDQ13158 208 aa11.21□□□□□ -0.61
CCDC84-209ENST00000580556 LASP1Q14847 261 aaKnown RBP11.21□□□□□ -0.61
CCDC84-209ENST00000580556 CT45A2Q5DJT8 189 aa11.21□□□□□ -0.61
CCDC84-209ENST00000580556 HLA-DQA1Q5Y7H0 255 aa11.21□□□□□ -0.61
CCDC84-209ENST00000580556 CDC73Q6P1J9 531 aa11.21□□□□□ -0.61
CCDC84-209ENST00000580556 C6orf89Q6UWU4 347 aa11.21□□□□□ -0.61
CCDC84-209ENST00000580556 SZRD1Q7Z422 152 aa11.21□□□□□ -0.61
CCDC84-209ENST00000580556 ARPINQ7Z6K5 226 aa11.21□□□□□ -0.61
CCDC84-209ENST00000580556 SLC15A4Q8N697 577 aa11.21□□□□□ -0.61
CCDC84-209ENST00000580556 OR8J3Q8NGG0 315 aa11.21□□□□□ -0.61
CCDC84-209ENST00000580556 OR52N2Q8NGI0 321 aa11.21□□□□□ -0.61
CCDC84-209ENST00000580556 BRIX1Q8TDN6 353 aaKnown RBP11.21□□□□□ -0.61
CCDC84-209ENST00000580556 LRRC58Q96CX6 371 aa11.21□□□□□ -0.61
CCDC84-209ENST00000580556 HSPBAP1Q96EW2 488 aa11.21□□□□□ -0.61
CCDC84-209ENST00000580556 MAGED4Q96JG8 741 aa11.21□□□□□ -0.61
CCDC84-209ENST00000580556 LCORQ96JN0 433 aaPredicted RBP11.21□□□□□ -0.61
CCDC84-209ENST00000580556 SLC35G5Q96KT7 338 aa11.21□□□□□ -0.61
CCDC84-209ENST00000580556 ZNF354BQ96LW1 612 aa11.21□□□□□ -0.61
CCDC84-209ENST00000580556 ANKRD27Q96NW4 1050 aa11.21□□□□□ -0.61
CCDC84-209ENST00000580556 NPAS2Q99743 824 aa11.21□□□□□ -0.61
CCDC84-209ENST00000580556 ITPAQ9BY32 194 aa11.21□□□□□ -0.61
CCDC84-209ENST00000580556 THUMPD1Q9NXG2 353 aaKnown RBP11.21□□□□□ -0.61
CCDC84-209ENST00000580556 NDE1Q9NXR1 346 aa11.21□□□□□ -0.61
CCDC84-209ENST00000580556 SLAMF8Q9P0V8 285 aa11.21□□□□□ -0.61
CCDC84-209ENST00000580556 FAF1Q9UNN5 650 aaPredicted RBP11.21□□□□□ -0.61
CCDC84-209ENST00000580556 DTX4Q9Y2E6 619 aa11.21□□□□□ -0.61
CCDC84-209ENST00000580556 PCDHGA9Q9Y5G4 932 aaKnown RBP11.21□□□□□ -0.61
CCDC84-209ENST00000580556 PRRC2CQ9Y520 2896 aaKnown RBP11.21□□□□□ -0.62
CCDC84-209ENST00000580556 ADGRG4Q8IZF6 3080 aa11.2□□□□□ -0.62
CCDC84-209ENST00000580556 MASP2O00187 686 aa11.2□□□□□ -0.62
CCDC84-209ENST00000580556 CLIC1O00299 241 aa11.2□□□□□ -0.62
CCDC84-209ENST00000580556 NKX2-2O95096 273 aa11.2□□□□□ -0.62
CCDC84-209ENST00000580556 CBX6O95503 412 aa11.2□□□□□ -0.62
CCDC84-209ENST00000580556 ALPPP05187 535 aa11.2□□□□□ -0.62
CCDC84-209ENST00000580556 ESRRAP11474 423 aaPredicted RBP11.2□□□□□ -0.62
CCDC84-209ENST00000580556 BMP2P12643 396 aa11.2□□□□□ -0.62
CCDC84-209ENST00000580556 KHKP50053 298 aa11.2□□□□□ -0.62
CCDC84-209ENST00000580556 NUDT2P50583 147 aa11.2□□□□□ -0.62
CCDC84-209ENST00000580556 MVDP53602 400 aa11.2□□□□□ -0.62
CCDC84-209ENST00000580556 PRKAG1P54619 331 aa11.2□□□□□ -0.62
CCDC84-209ENST00000580556 GABPB1Q06547 395 aaPredicted RBP11.2□□□□□ -0.62
CCDC84-209ENST00000580556 MEP1AQ16819 746 aa11.2□□□□□ -0.62
CCDC84-209ENST00000580556 GTDC1Q4AE62 458 aa11.2□□□□□ -0.62
CCDC84-209ENST00000580556 CYP27C1Q4G0S4 372 aa11.2□□□□□ -0.62
CCDC84-209ENST00000580556 RUNDC3AQ59EK9 446 aa11.2□□□□□ -0.62
CCDC84-209ENST00000580556 PIGGQ5H8A4 983 aa11.2□□□□□ -0.62
CCDC84-209ENST00000580556 AGAP7PQ5VUJ5 663 aa11.2□□□□□ -0.62
CCDC84-209ENST00000580556 C8orf82Q6P1X6 216 aaPredicted RBP11.2□□□□□ -0.62
CCDC84-209ENST00000580556 RPS19BP1Q86WX3 136 aaKnown RBP11.2□□□□□ -0.62
CCDC84-209ENST00000580556 RNF130Q86XS8 419 aa11.2□□□□□ -0.62
CCDC84-209ENST00000580556 DND1Q8IYX4 353 aaKnown RBP11.2□□□□□ -0.62
CCDC84-209ENST00000580556 TAGAPQ8N103 731 aa11.2□□□□□ -0.62
CCDC84-209ENST00000580556 RBMXL3Q8N7X1 1067 aaKnown RBP11.2□□□□□ -0.62
CCDC84-209ENST00000580556 SLC22A8Q8TCC7 542 aa11.2□□□□□ -0.62
CCDC84-209ENST00000580556 MARVELD3Q96A59 401 aa11.2□□□□□ -0.62
CCDC84-209ENST00000580556 NSL1Q96IY1 281 aa11.2□□□□□ -0.62
CCDC84-209ENST00000580556 C5orf34Q96MH7 638 aa11.2□□□□□ -0.62
CCDC84-209ENST00000580556 AGAP4Q96P64 663 aa11.2□□□□□ -0.62
CCDC84-209ENST00000580556 GAL3ST4Q96RP7 486 aa11.2□□□□□ -0.62
CCDC84-209ENST00000580556 SH3GL1Q99961 368 aa11.2□□□□□ -0.62
CCDC84-209ENST00000580556 HOPXQ9BPY8 73 aaPredicted RBP11.2□□□□□ -0.62
CCDC84-209ENST00000580556 CPPED1Q9BRF8 314 aaPredicted RBP11.2□□□□□ -0.62
CCDC84-209ENST00000580556 GPATCH1Q9BRR8 931 aaKnown RBP11.2□□□□□ -0.62
CCDC84-209ENST00000580556 RNF32Q9H0A6 362 aa11.2□□□□□ -0.62
CCDC84-209ENST00000580556 NXF5Q9H1B4 397 aaKnown RBP11.2□□□□□ -0.62
CCDC84-209ENST00000580556 PIGUQ9H490 435 aa11.2□□□□□ -0.62
CCDC84-209ENST00000580556 Q9N2J8 555 aa11.2□□□□□ -0.62
CCDC84-209ENST00000580556 EQTNQ9NQ60 294 aa11.2□□□□□ -0.62
CCDC84-209ENST00000580556 GPR83Q9NYM4 423 aa11.2□□□□□ -0.62
CCDC84-209ENST00000580556 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.2□□□□□ -0.62
CCDC84-209ENST00000580556 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.2□□□□□ -0.62
CCDC84-209ENST00000580556 SLC5A6Q9Y289 635 aa11.2□□□□□ -0.62
CCDC84-209ENST00000580556 AP3M1Q9Y2T2 418 aa11.2□□□□□ -0.62
CCDC84-209ENST00000580556 YARS2Q9Y2Z4 477 aaKnown RBP11.2□□□□□ -0.62
CCDC84-209ENST00000580556 PCDHGB3Q9Y5G1 929 aa11.2□□□□□ -0.62
CCDC84-209ENST00000580556 EVPLLA8MZ36 301 aa11.19□□□□□ -0.62
CCDC84-209ENST00000580556 AIM2O14862 343 aa11.19□□□□□ -0.62
CCDC84-209ENST00000580556 UNC5CO95185 931 aa11.19□□□□□ -0.62
CCDC84-209ENST00000580556 AK1P00568 194 aa11.19□□□□□ -0.62
CCDC84-209ENST00000580556 GUSBP08236 651 aa11.19□□□□□ -0.62
CCDC84-209ENST00000580556 ALOX5P09917 674 aa11.19□□□□□ -0.62
CCDC84-209ENST00000580556 ACP2P11117 423 aa11.19□□□□□ -0.62
CCDC84-209ENST00000580556 NAGAP17050 411 aa11.19□□□□□ -0.62
CCDC84-209ENST00000580556 GPX2P18283 190 aa11.19□□□□□ -0.62
CCDC84-209ENST00000580556 MATN1P21941 496 aa11.19□□□□□ -0.62
CCDC84-209ENST00000580556 TRHRP34981 398 aaPredicted RBP11.19□□□□□ -0.62
CCDC84-209ENST00000580556 NRG3P56975 720 aa11.19□□□□□ -0.62
CCDC84-209ENST00000580556 CORO7P57737 925 aa11.19□□□□□ -0.62
CCDC84-209ENST00000580556 ART3Q13508 389 aa11.19□□□□□ -0.62
CCDC84-209ENST00000580556 ACER2Q5QJU3 275 aa11.19□□□□□ -0.62
CCDC84-209ENST00000580556 ABHD17BQ5VST6 288 aa11.19□□□□□ -0.62
CCDC84-209ENST00000580556 SLC6A19Q695T7 634 aa11.19□□□□□ -0.62
CCDC84-209ENST00000580556 IGFL2Q6UWQ7 119 aa11.19□□□□□ -0.62
CCDC84-209ENST00000580556 NPSR1Q6W5P4 371 aa11.19□□□□□ -0.62
CCDC84-209ENST00000580556 GPALPP1Q8IXQ4 340 aa11.19□□□□□ -0.62
CCDC84-209ENST00000580556 CLEC4FQ8N1N0 589 aa11.19□□□□□ -0.62
CCDC84-209ENST00000580556 AMER2Q8N7J2 671 aa11.19□□□□□ -0.62
CCDC84-209ENST00000580556 SLC16A11Q8NCK7 471 aa11.19□□□□□ -0.62
CCDC84-209ENST00000580556 ADAMTS15Q8TE58 950 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms