RNA–Protein interactions for RNA: ENST00000580237.5

NDEL1-208, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 4

Gene NDEL1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-208ENST00000580237 MED12Q93074 2177 aa9.98□□□□□ -0.81
NDEL1-208ENST00000580237 INTS1Q8N201 2190 aaKnown RBP9.97□□□□□ -0.81
NDEL1-208ENST00000580237 SNPHO15079 494 aa9.97□□□□□ -0.81
NDEL1-208ENST00000580237 CFLARO15519 480 aa9.97□□□□□ -0.81
NDEL1-208ENST00000580237 SCO2O43819 266 aa9.97□□□□□ -0.81
NDEL1-208ENST00000580237 TBX19O60806 448 aa9.97□□□□□ -0.81
NDEL1-208ENST00000580237 KCNH1O95259 989 aa9.97□□□□□ -0.81
NDEL1-208ENST00000580237 CT45A8P0DMV1 189 aa9.97□□□□□ -0.81
NDEL1-208ENST00000580237 CT45A9P0DMV2 189 aa9.97□□□□□ -0.81
NDEL1-208ENST00000580237 PRPS1L1P21108 318 aa9.97□□□□□ -0.81
NDEL1-208ENST00000580237 ACVR2AP27037 513 aa9.97□□□□□ -0.81
NDEL1-208ENST00000580237 COL8A1P27658 744 aa9.97□□□□□ -0.81
NDEL1-208ENST00000580237 SOAT1P35610 550 aa9.97□□□□□ -0.81
NDEL1-208ENST00000580237 CDK9P50750 372 aaKnown RBP9.97□□□□□ -0.81
NDEL1-208ENST00000580237 ADORA2A-AS1P86434 159 aa9.97□□□□□ -0.81
NDEL1-208ENST00000580237 PSG6Q00889 435 aa9.97□□□□□ -0.81
NDEL1-208ENST00000580237 BST1Q10588 318 aa9.97□□□□□ -0.81
NDEL1-208ENST00000580237 SNTA1Q13424 505 aa9.97□□□□□ -0.81
NDEL1-208ENST00000580237 MPP2Q14168 576 aa9.97□□□□□ -0.81
NDEL1-208ENST00000580237 CT45A2Q5DJT8 189 aa9.97□□□□□ -0.81
NDEL1-208ENST00000580237 CPTPQ5TA50 214 aa9.97□□□□□ -0.81
NDEL1-208ENST00000580237 CES4AQ5XG92 561 aa9.97□□□□□ -0.81
NDEL1-208ENST00000580237 DESI1Q6ICB0 168 aa9.97□□□□□ -0.81
NDEL1-208ENST00000580237 TMEM211Q6ICI0 200 aa9.97□□□□□ -0.81
NDEL1-208ENST00000580237 TRIM42Q8IWZ5 723 aa9.97□□□□□ -0.81
NDEL1-208ENST00000580237 OR7A2PQ8NGA2 310 aa9.97□□□□□ -0.81
NDEL1-208ENST00000580237 CEP70Q8NHQ1 597 aa9.97□□□□□ -0.81
NDEL1-208ENST00000580237 NEIL3Q8TAT5 605 aa9.97□□□□□ -0.81
NDEL1-208ENST00000580237 GPR151Q8TDV0 419 aa9.97□□□□□ -0.81
NDEL1-208ENST00000580237 CA5BP1Q8WTZ4 195 aa9.97□□□□□ -0.81
NDEL1-208ENST00000580237 SDCCAG3Q96C92 435 aa9.97□□□□□ -0.81
NDEL1-208ENST00000580237 RMND5BQ96G75 393 aaPredicted RBP9.97□□□□□ -0.81
NDEL1-208ENST00000580237 SLC35A4Q96G79 324 aa9.97□□□□□ -0.81
NDEL1-208ENST00000580237 GNRHR2Q96P88 292 aa9.97□□□□□ -0.81
NDEL1-208ENST00000580237 NUF2Q9BZD4 464 aa9.97□□□□□ -0.81
NDEL1-208ENST00000580237 ZNF395Q9H8N7 513 aaPredicted RBP9.97□□□□□ -0.81
NDEL1-208ENST00000580237 PROK2Q9HC23 129 aa9.97□□□□□ -0.81
NDEL1-208ENST00000580237 SERHLQ9NQF3 203 aa9.97□□□□□ -0.81
NDEL1-208ENST00000580237 ACSS1Q9NUB1 689 aaPredicted RBP9.97□□□□□ -0.81
NDEL1-208ENST00000580237 ZCCHC3Q9NUD5 404 aaKnown RBP9.97□□□□□ -0.81
NDEL1-208ENST00000580237 SPRR3Q9UBC9 169 aa9.97□□□□□ -0.81
NDEL1-208ENST00000580237 DKKL1Q9UK85 242 aa9.97□□□□□ -0.81
NDEL1-208ENST00000580237 CBLCQ9ULV8 474 aa9.97□□□□□ -0.81
NDEL1-208ENST00000580237 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.97□□□□□ -0.81
NDEL1-208ENST00000580237 WIF1Q9Y5W5 379 aa9.97□□□□□ -0.81
NDEL1-208ENST00000580237 PKDREJQ9NTG1 2253 aa9.96□□□□□ -0.81
NDEL1-208ENST00000580237 A0A1B0GVC2 190 aa9.96□□□□□ -0.82
NDEL1-208ENST00000580237 A0A1W2PRB8 838 aa9.96□□□□□ -0.82
NDEL1-208ENST00000580237 C2orf72A6NCS6 295 aa9.96□□□□□ -0.82
NDEL1-208ENST00000580237 TTC36A6NLP5 189 aa9.96□□□□□ -0.82
NDEL1-208ENST00000580237 WDR1O75083 606 aa9.96□□□□□ -0.82
NDEL1-208ENST00000580237 ICOSLGO75144 302 aa9.96□□□□□ -0.82
NDEL1-208ENST00000580237 PSMG1O95456 288 aa9.96□□□□□ -0.82
NDEL1-208ENST00000580237 IFI6P09912 130 aa9.96□□□□□ -0.82
NDEL1-208ENST00000580237 G6PDP11413 515 aa9.96□□□□□ -0.82
NDEL1-208ENST00000580237 CYP4B1P13584 511 aa9.96□□□□□ -0.82
NDEL1-208ENST00000580237 ENDOUP21128 410 aaKnown RBP9.96□□□□□ -0.82
NDEL1-208ENST00000580237 GABRA3P34903 492 aa9.96□□□□□ -0.82
NDEL1-208ENST00000580237 EVI2BP34910 448 aa9.96□□□□□ -0.82
NDEL1-208ENST00000580237 PRIM2P49643 509 aa9.96□□□□□ -0.82
NDEL1-208ENST00000580237 CLK3P49761 638 aaKnown RBP9.96□□□□□ -0.82
NDEL1-208ENST00000580237 PNLIPRP2P54317 469 aa9.96□□□□□ -0.82
NDEL1-208ENST00000580237 STX5Q13190 355 aa9.96□□□□□ -0.82
NDEL1-208ENST00000580237 ART3Q13508 389 aa9.96□□□□□ -0.82
NDEL1-208ENST00000580237 TP53BP2Q13625 1128 aa9.96□□□□□ -0.82
NDEL1-208ENST00000580237 CYP27C1Q4G0S4 372 aa9.96□□□□□ -0.82
NDEL1-208ENST00000580237 GXYLT1Q4G148 440 aa9.96□□□□□ -0.82
NDEL1-208ENST00000580237 ATG16L1Q676U5 607 aa9.96□□□□□ -0.82
NDEL1-208ENST00000580237 TIGD3Q6B0B8 471 aa9.96□□□□□ -0.82
NDEL1-208ENST00000580237 TMEM81Q6P7N7 255 aa9.96□□□□□ -0.82
NDEL1-208ENST00000580237 B3GNT6Q6ZMB0 384 aa9.96□□□□□ -0.82
NDEL1-208ENST00000580237 ACAD11Q709F0 780 aa9.96□□□□□ -0.82
NDEL1-208ENST00000580237 KRTCAP2Q8N6L1 136 aa9.96□□□□□ -0.82
NDEL1-208ENST00000580237 COX18Q8N8Q8 333 aa9.96□□□□□ -0.82
NDEL1-208ENST00000580237 CDRT4Q8N9R6 151 aa9.96□□□□□ -0.82
NDEL1-208ENST00000580237 NUP43Q8NFH3 380 aa9.96□□□□□ -0.82
NDEL1-208ENST00000580237 OR4K17Q8NGC6 315 aa9.96□□□□□ -0.82
NDEL1-208ENST00000580237 OR4N2Q8NGD1 307 aa9.96□□□□□ -0.82
NDEL1-208ENST00000580237 OR10Q1Q8NGQ4 319 aa9.96□□□□□ -0.82
NDEL1-208ENST00000580237 OR14L1PQ8NHC6 308 aa9.96□□□□□ -0.82
NDEL1-208ENST00000580237 SLC9A6Q92581 669 aa9.96□□□□□ -0.82
NDEL1-208ENST00000580237 RND1Q92730 232 aa9.96□□□□□ -0.82
NDEL1-208ENST00000580237 DMRTA2Q96SC8 542 aa9.96□□□□□ -0.82
NDEL1-208ENST00000580237 SORT1Q99523 831 aa9.96□□□□□ -0.82
NDEL1-208ENST00000580237 LMF2Q9BU23 707 aaKnown RBP9.96□□□□□ -0.82
NDEL1-208ENST00000580237 TMBIM4Q9HC24 238 aa9.96□□□□□ -0.82
NDEL1-208ENST00000580237 NEUROD4Q9HD90 331 aa9.96□□□□□ -0.82
NDEL1-208ENST00000580237 ACKR4Q9NPB9 350 aa9.96□□□□□ -0.82
NDEL1-208ENST00000580237 PPP4R1LQ9P1A2 415 aa9.96□□□□□ -0.82
NDEL1-208ENST00000580237 MARCOQ9UEW3 520 aaPredicted RBP9.96□□□□□ -0.82
NDEL1-208ENST00000580237 ATP6V1HQ9UI12 483 aa9.96□□□□□ -0.82
NDEL1-208ENST00000580237 KLF2Q9Y5W3 355 aaPredicted RBP9.96□□□□□ -0.82
NDEL1-208ENST00000580237 DOCK7Q96N67 2140 aa9.95□□□□□ -0.82
NDEL1-208ENST00000580237 NAV2Q8IVL1 2488 aa9.95□□□□□ -0.82
NDEL1-208ENST00000580237 FAM90A27PA6NNH2 459 aa9.95□□□□□ -0.82
NDEL1-208ENST00000580237 EMC8O43402 210 aa9.95□□□□□ -0.82
NDEL1-208ENST00000580237 TSPAN2O60636 221 aa9.95□□□□□ -0.82
NDEL1-208ENST00000580237 CLDN14O95500 239 aa9.95□□□□□ -0.82
NDEL1-208ENST00000580237 C6orf47O95873 294 aa9.95□□□□□ -0.82
NDEL1-208ENST00000580237 HPNP05981 417 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms