RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 HIVEP3Q5T1R4 2406 aa6□□□□□ -1.45
TRAF4-213ENST00000578917 OR14I1A6ND48 311 aa6□□□□□ -1.45
TRAF4-213ENST00000578917 WIPF3A6NGB9 483 aa6□□□□□ -1.45
TRAF4-213ENST00000578917 PRAMEF25A6NGN4 478 aa6□□□□□ -1.45
TRAF4-213ENST00000578917 TTC36A6NLP5 189 aa6□□□□□ -1.45
TRAF4-213ENST00000578917 FIGNL2A6NMB9 653 aa6□□□□□ -1.45
TRAF4-213ENST00000578917 PRSS44E7EML9 344 aa6□□□□□ -1.45
TRAF4-213ENST00000578917 SCAMP2O15127 329 aaKnown RBP6□□□□□ -1.45
TRAF4-213ENST00000578917 HDAC3O15379 428 aa6□□□□□ -1.45
TRAF4-213ENST00000578917 TBX19O60806 448 aa6□□□□□ -1.45
TRAF4-213ENST00000578917 TRIM3O75382 744 aaPredicted RBP6□□□□□ -1.45
TRAF4-213ENST00000578917 CBR3O75828 277 aa6□□□□□ -1.45
TRAF4-213ENST00000578917 DHRS4L1P0CG22 281 aa6□□□□□ -1.45
TRAF4-213ENST00000578917 CT45A8P0DMV1 189 aa6□□□□□ -1.45
TRAF4-213ENST00000578917 CT45A9P0DMV2 189 aa6□□□□□ -1.45
TRAF4-213ENST00000578917 LBPP18428 481 aa6□□□□□ -1.45
TRAF4-213ENST00000578917 ATP6V1C1P21283 382 aa6□□□□□ -1.45
TRAF4-213ENST00000578917 TCEA1P23193 301 aaKnown RBP6□□□□□ -1.45
TRAF4-213ENST00000578917 ACVR2AP27037 513 aa6□□□□□ -1.45
TRAF4-213ENST00000578917 SOAT1P35610 550 aa6□□□□□ -1.45
TRAF4-213ENST00000578917 CCT3P49368 545 aaKnown RBP6□□□□□ -1.45
TRAF4-213ENST00000578917 SLC18A1P54219 525 aa6□□□□□ -1.45
TRAF4-213ENST00000578917 PNLIPRP2P54317 469 aa6□□□□□ -1.45
TRAF4-213ENST00000578917 DIO3P55073 304 aa6□□□□□ -1.45
TRAF4-213ENST00000578917 NME5P56597 212 aa6□□□□□ -1.45
TRAF4-213ENST00000578917 WDR4P57081 412 aaKnown RBP6□□□□□ -1.45
TRAF4-213ENST00000578917 STX5Q13190 355 aa6□□□□□ -1.45
TRAF4-213ENST00000578917 SF3B4Q15427 424 aaKnown RBP eCLIP6□□□□□ -1.459e-11■■■■□ 22.1
TRAF4-213ENST00000578917 CEBPEQ15744 281 aa6□□□□□ -1.45
TRAF4-213ENST00000578917 HYAL4Q2M3T9 481 aa6□□□□□ -1.45
TRAF4-213ENST00000578917 SMU1Q2TAY7 513 aa6□□□□□ -1.45
TRAF4-213ENST00000578917 CT45A2Q5DJT8 189 aa6□□□□□ -1.45
TRAF4-213ENST00000578917 XKR7Q5GH72 579 aa6□□□□□ -1.45
TRAF4-213ENST00000578917 TNFAIP8L3Q5GJ75 292 aa6□□□□□ -1.45
TRAF4-213ENST00000578917 AGBL2Q5U5Z8 902 aa6□□□□□ -1.45
TRAF4-213ENST00000578917 TIGD3Q6B0B8 471 aa6□□□□□ -1.45
TRAF4-213ENST00000578917 DESI1Q6ICB0 168 aa6□□□□□ -1.45
TRAF4-213ENST00000578917 Q6ZPB1 254 aaPredicted RBP6□□□□□ -1.45
TRAF4-213ENST00000578917 ACAD11Q709F0 780 aa6□□□□□ -1.45
TRAF4-213ENST00000578917 YRDCQ86U90 279 aaKnown RBP6□□□□□ -1.45
TRAF4-213ENST00000578917 ZNF808Q8N4W9 903 aaPredicted RBP6□□□□□ -1.45
TRAF4-213ENST00000578917 CDRT4Q8N9R6 151 aa6□□□□□ -1.45
TRAF4-213ENST00000578917 OR4K17Q8NGC6 315 aa6□□□□□ -1.45
TRAF4-213ENST00000578917 OR6Y1Q8NGX8 325 aa6□□□□□ -1.45
TRAF4-213ENST00000578917 NEIL3Q8TAT5 605 aa6□□□□□ -1.45
TRAF4-213ENST00000578917 FBXO30Q8TB52 745 aa6□□□□□ -1.45
TRAF4-213ENST00000578917 RAB3IL1Q8TBN0 382 aa6□□□□□ -1.45
TRAF4-213ENST00000578917 LRRC8CQ8TDW0 803 aa6□□□□□ -1.45
TRAF4-213ENST00000578917 OR5P2Q8WZ92 322 aa6□□□□□ -1.45
TRAF4-213ENST00000578917 RND1Q92730 232 aa6□□□□□ -1.45
TRAF4-213ENST00000578917 ARL8AQ96BM9 186 aa6□□□□□ -1.45
TRAF4-213ENST00000578917 RMND5BQ96G75 393 aaPredicted RBP6□□□□□ -1.45
TRAF4-213ENST00000578917 ZNF764Q96H86 408 aaPredicted RBP6□□□□□ -1.45
TRAF4-213ENST00000578917 FCRL1Q96LA6 429 aa6□□□□□ -1.45
TRAF4-213ENST00000578917 ATP6V1G3Q96LB4 118 aa6□□□□□ -1.45
TRAF4-213ENST00000578917 PHF12Q96QT6 1004 aa6□□□□□ -1.45
TRAF4-213ENST00000578917 NODALQ96S42 347 aa6□□□□□ -1.45
TRAF4-213ENST00000578917 SORT1Q99523 831 aa6□□□□□ -1.45
TRAF4-213ENST00000578917 ZBTB18Q99592 522 aa6□□□□□ -1.45
TRAF4-213ENST00000578917 YIPF4Q9BSR8 244 aa6□□□□□ -1.45
TRAF4-213ENST00000578917 DUSP26Q9BV47 211 aa6□□□□□ -1.45
TRAF4-213ENST00000578917 OSBPL11Q9BXB4 747 aa6□□□□□ -1.45
TRAF4-213ENST00000578917 TBL1XR1Q9BZK7 514 aa6□□□□□ -1.45
TRAF4-213ENST00000578917 SLC6A15Q9H2J7 730 aa6□□□□□ -1.45
TRAF4-213ENST00000578917 ACBD3Q9H3P7 528 aa6□□□□□ -1.45
TRAF4-213ENST00000578917 ZDHHC11Q9H8X9 412 aa6□□□□□ -1.45
TRAF4-213ENST00000578917 ACKR4Q9NPB9 350 aa6□□□□□ -1.45
TRAF4-213ENST00000578917 PNPLA3Q9NST1 481 aa6□□□□□ -1.45
TRAF4-213ENST00000578917 ZCCHC3Q9NUD5 404 aaKnown RBP6□□□□□ -1.45
TRAF4-213ENST00000578917 QPCTLQ9NXS2 382 aa6□□□□□ -1.45
TRAF4-213ENST00000578917 ATP6V1HQ9UI12 483 aa6□□□□□ -1.45
TRAF4-213ENST00000578917 CAMK2AQ9UQM7 478 aa6□□□□□ -1.45
TRAF4-213ENST00000578917 C15orf41Q9Y2V0 281 aa6□□□□□ -1.45
TRAF4-213ENST00000578917 PCDHGB3Q9Y5G1 929 aa6□□□□□ -1.45
TRAF4-213ENST00000578917 DIDO1Q9BTC0 2240 aaKnown RBP5.99□□□□□ -1.45
TRAF4-213ENST00000578917 CELSR2Q9HCU4 2923 aa5.99□□□□□ -1.45
TRAF4-213ENST00000578917 SHANK1Q9Y566 2161 aa5.99□□□□□ -1.45
TRAF4-213ENST00000578917 GOLGA8QA0A0J9YX86 632 aa5.99□□□□□ -1.45
TRAF4-213ENST00000578917 GOLGA8OA6NCC3 632 aa5.99□□□□□ -1.45
TRAF4-213ENST00000578917 LRRC3CA6NJW4 275 aa5.99□□□□□ -1.45
TRAF4-213ENST00000578917 FAM47E-STBD1D6RA91 191 aa5.99□□□□□ -1.45
TRAF4-213ENST00000578917 GOLGA8NF8WBI6 632 aa5.99□□□□□ -1.45
TRAF4-213ENST00000578917 AQP7O14520 342 aa5.99□□□□□ -1.45
TRAF4-213ENST00000578917 SCO2O43819 266 aa5.99□□□□□ -1.45
TRAF4-213ENST00000578917 GMFGO60234 142 aa5.99□□□□□ -1.45
TRAF4-213ENST00000578917 DIAPH2O60879 1101 aa5.99□□□□□ -1.45
TRAF4-213ENST00000578917 CPSF4O95639 269 aaKnown RBP5.99□□□□□ -1.45
TRAF4-213ENST00000578917 CLDN1O95832 211 aa5.99□□□□□ -1.45
TRAF4-213ENST00000578917 C6orf47O95873 294 aa5.99□□□□□ -1.45
TRAF4-213ENST00000578917 IGHG3P01860 377 aa5.99□□□□□ -1.45
TRAF4-213ENST00000578917 KRT16P08779 473 aa5.99□□□□□ -1.45
TRAF4-213ENST00000578917 HOXD4P09016 255 aaPredicted RBP5.99□□□□□ -1.45
TRAF4-213ENST00000578917 RNF224P0DH78 156 aa5.99□□□□□ -1.45
TRAF4-213ENST00000578917 CYP4B1P13584 511 aa5.99□□□□□ -1.45
TRAF4-213ENST00000578917 COL8A1P27658 744 aa5.99□□□□□ -1.45
TRAF4-213ENST00000578917 HTR1EP28566 365 aa5.99□□□□□ -1.45
TRAF4-213ENST00000578917 EPHA3P29320 983 aa5.99□□□□□ -1.45
TRAF4-213ENST00000578917 S100A3P33764 101 aa5.99□□□□□ -1.45
TRAF4-213ENST00000578917 KIR3DL1P43629 444 aa5.99□□□□□ -1.45
TRAF4-213ENST00000578917 PRIM2P49643 509 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms