RNA–Protein interactions for RNA: ENST00000578663.1

CDK5RAP3-209, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 949 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-209ENST00000578663 LRRC70Q7Z2Q7 622 aa6.48□□□□□ -1.37
CDK5RAP3-209ENST00000578663 ZNF550Q7Z398 422 aa6.48□□□□□ -1.37
CDK5RAP3-209ENST00000578663 C10orf107Q8IVU9 208 aa6.48□□□□□ -1.37
CDK5RAP3-209ENST00000578663 TCAIMQ8N3R3 496 aa6.48□□□□□ -1.37
CDK5RAP3-209ENST00000578663 GOLGA6L1Q8N7Z2 621 aa6.48□□□□□ -1.37
CDK5RAP3-209ENST00000578663 SNX31Q8N9S9 440 aa6.48□□□□□ -1.37
CDK5RAP3-209ENST00000578663 MGARPQ8TDB4 240 aa6.48□□□□□ -1.37
CDK5RAP3-209ENST00000578663 TP53INP1Q96A56 240 aa6.48□□□□□ -1.37
CDK5RAP3-209ENST00000578663 REPS1Q96D71 796 aa6.48□□□□□ -1.37
CDK5RAP3-209ENST00000578663 DTNBP1Q96EV8 351 aa6.48□□□□□ -1.37
CDK5RAP3-209ENST00000578663 PKNOX2Q96KN3 472 aa6.48□□□□□ -1.37
CDK5RAP3-209ENST00000578663 NSUN5Q96P11 429 aaKnown RBP6.48□□□□□ -1.37
CDK5RAP3-209ENST00000578663 GNRHR2Q96P88 292 aa6.48□□□□□ -1.37
CDK5RAP3-209ENST00000578663 DGAT2Q96PD7 388 aa6.48□□□□□ -1.37
CDK5RAP3-209ENST00000578663 TMEM237Q96Q45 408 aa6.48□□□□□ -1.37
CDK5RAP3-209ENST00000578663 KCNK17Q96T54 332 aa6.48□□□□□ -1.37
CDK5RAP3-209ENST00000578663 CD244Q9BZW8 370 aa6.48□□□□□ -1.37
CDK5RAP3-209ENST00000578663 GRIP2Q9C0E4 1043 aa6.48□□□□□ -1.37
CDK5RAP3-209ENST00000578663 OR2B2Q9GZK3 357 aa6.48□□□□□ -1.37
CDK5RAP3-209ENST00000578663 REXO4Q9GZR2 422 aaKnown RBP6.48□□□□□ -1.37
CDK5RAP3-209ENST00000578663 SHARPINQ9H0F6 387 aa6.48□□□□□ -1.37
CDK5RAP3-209ENST00000578663 NT5DC2Q9H857 520 aa6.48□□□□□ -1.37
CDK5RAP3-209ENST00000578663 DNAJC11Q9NVH1 559 aa6.48□□□□□ -1.37
CDK5RAP3-209ENST00000578663 TMCO1Q9UM00 188 aa6.48□□□□□ -1.37
CDK5RAP3-209ENST00000578663 SPACA6W5XKT8 324 aa6.48□□□□□ -1.37
CDK5RAP3-209ENST00000578663 PRR14LQ5THK1 2151 aa6.47□□□□□ -1.37
CDK5RAP3-209ENST00000578663 PLCE1Q9P212 2302 aa6.47□□□□□ -1.37
CDK5RAP3-209ENST00000578663 WDR91A4D1P6 747 aa6.47□□□□□ -1.37
CDK5RAP3-209ENST00000578663 HMGB1P1B2RPK0 211 aaPredicted RBP6.47□□□□□ -1.37
CDK5RAP3-209ENST00000578663 K7EPI3 171 aa6.47□□□□□ -1.37
CDK5RAP3-209ENST00000578663 PPP6CO00743 305 aa6.47□□□□□ -1.37
CDK5RAP3-209ENST00000578663 TM9SF1O15321 606 aa6.47□□□□□ -1.37
CDK5RAP3-209ENST00000578663 EMC8O43402 210 aa6.47□□□□□ -1.37
CDK5RAP3-209ENST00000578663 ATP8B1O43520 1251 aa6.47□□□□□ -1.37
CDK5RAP3-209ENST00000578663 LDB3O75112 727 aa6.47□□□□□ -1.37
CDK5RAP3-209ENST00000578663 TBX6O95947 436 aaPredicted RBP6.47□□□□□ -1.37
CDK5RAP3-209ENST00000578663 CGAP01215 116 aa6.47□□□□□ -1.37
CDK5RAP3-209ENST00000578663 THBDP07204 575 aa6.47□□□□□ -1.37
CDK5RAP3-209ENST00000578663 DANCRP0C864 163 aa6.47□□□□□ -1.37
CDK5RAP3-209ENST00000578663 DHRS4L1P0CG22 281 aa6.47□□□□□ -1.37
CDK5RAP3-209ENST00000578663 VSIG8P0DPA2 414 aa6.47□□□□□ -1.37
CDK5RAP3-209ENST00000578663 SRD5A1P18405 259 aa6.47□□□□□ -1.37
CDK5RAP3-209ENST00000578663 GNAZP19086 355 aa6.47□□□□□ -1.37
CDK5RAP3-209ENST00000578663 TBXA2RP21731 343 aa6.47□□□□□ -1.37
CDK5RAP3-209ENST00000578663 ACVR1BP36896 505 aa6.47□□□□□ -1.37
CDK5RAP3-209ENST00000578663 CASP3P42574 277 aa6.47□□□□□ -1.37
CDK5RAP3-209ENST00000578663 SERPINB4P48594 390 aa6.47□□□□□ -1.37
CDK5RAP3-209ENST00000578663 LHX2P50458 406 aa6.47□□□□□ -1.37
CDK5RAP3-209ENST00000578663 PLA2G16P53816 162 aa6.47□□□□□ -1.37
CDK5RAP3-209ENST00000578663 CASP9P55211 416 aa6.47□□□□□ -1.37
CDK5RAP3-209ENST00000578663 CDH13P55290 713 aa6.47□□□□□ -1.37
CDK5RAP3-209ENST00000578663 GFRA1P56159 465 aa6.47□□□□□ -1.37
CDK5RAP3-209ENST00000578663 SLC37A1P57057 533 aa6.47□□□□□ -1.37
CDK5RAP3-209ENST00000578663 WDR4P57081 412 aaKnown RBP6.47□□□□□ -1.37
CDK5RAP3-209ENST00000578663 LOXL1Q08397 574 aaPredicted RBP6.47□□□□□ -1.37
CDK5RAP3-209ENST00000578663 TOMM20Q15388 145 aa6.47□□□□□ -1.37
CDK5RAP3-209ENST00000578663 BCL2A1Q16548 175 aa6.47□□□□□ -1.37
CDK5RAP3-209ENST00000578663 PDK4Q16654 411 aa6.47□□□□□ -1.37
CDK5RAP3-209ENST00000578663 ZNF678Q5SXM1 525 aa6.47□□□□□ -1.37
CDK5RAP3-209ENST00000578663 VWA1Q6PCB0 445 aa6.47□□□□□ -1.37
CDK5RAP3-209ENST00000578663 AAGABQ6PD74 315 aa6.47□□□□□ -1.37
CDK5RAP3-209ENST00000578663 DNAJC14Q6Y2X3 702 aaPredicted RBP6.47□□□□□ -1.37
CDK5RAP3-209ENST00000578663 ZCCHC23Q6ZST2 131 aa6.47□□□□□ -1.37
CDK5RAP3-209ENST00000578663 GOLGA7Q7Z5G4 137 aa6.47□□□□□ -1.37
CDK5RAP3-209ENST00000578663 YRDCQ86U90 279 aaKnown RBP6.47□□□□□ -1.37
CDK5RAP3-209ENST00000578663 ST13P4Q8IZP2 240 aaPredicted RBP6.47□□□□□ -1.37
CDK5RAP3-209ENST00000578663 TEX9Q8N6V9 391 aa6.47□□□□□ -1.37
CDK5RAP3-209ENST00000578663 SRFBP1Q8NEF9 429 aaKnown RBP6.47□□□□□ -1.37
CDK5RAP3-209ENST00000578663 C17orf47Q8NEP4 570 aa6.47□□□□□ -1.37
CDK5RAP3-209ENST00000578663 OR1J4Q8NGS1 313 aa6.47□□□□□ -1.37
CDK5RAP3-209ENST00000578663 RDH11Q8TC12 318 aa6.47□□□□□ -1.37
CDK5RAP3-209ENST00000578663 ZNF483Q8TF39 744 aaPredicted RBP6.47□□□□□ -1.37
CDK5RAP3-209ENST00000578663 ZC3HAV1LQ96H79 300 aaKnown RBP6.47□□□□□ -1.37
CDK5RAP3-209ENST00000578663 KCNC2Q96PR1 638 aa6.47□□□□□ -1.37
CDK5RAP3-209ENST00000578663 TNFRSF13CQ96RJ3 184 aa6.47□□□□□ -1.37
CDK5RAP3-209ENST00000578663 GAL3ST4Q96RP7 486 aa6.47□□□□□ -1.37
CDK5RAP3-209ENST00000578663 GATA5Q9BWX5 397 aaPredicted RBP6.47□□□□□ -1.37
CDK5RAP3-209ENST00000578663 OR10A4Q9H209 315 aa6.47□□□□□ -1.37
CDK5RAP3-209ENST00000578663 GSTO2Q9H4Y5 243 aa6.47□□□□□ -1.37
CDK5RAP3-209ENST00000578663 ESRP2Q9H6T0 727 aaKnown RBP6.47□□□□□ -1.37
CDK5RAP3-209ENST00000578663 ACTR8Q9H981 624 aa6.47□□□□□ -1.37
CDK5RAP3-209ENST00000578663 CNOT10Q9H9A5 744 aaKnown RBP6.47□□□□□ -1.37
CDK5RAP3-209ENST00000578663 ZBTB26Q9HCK0 441 aa6.47□□□□□ -1.37
CDK5RAP3-209ENST00000578663 TEX10Q9NXF1 929 aaPredicted RBP6.47□□□□□ -1.37
CDK5RAP3-209ENST00000578663 OPTCQ9UBM4 332 aa6.47□□□□□ -1.37
CDK5RAP3-209ENST00000578663 MID2Q9UJV3 735 aa6.47□□□□□ -1.37
CDK5RAP3-209ENST00000578663 PCTPQ9UKL6 214 aa6.47□□□□□ -1.37
CDK5RAP3-209ENST00000578663 LAMP3Q9UQV4 416 aa6.47□□□□□ -1.37
CDK5RAP3-209ENST00000578663 CADP27708 2225 aa6.46□□□□□ -1.37
CDK5RAP3-209ENST00000578663 MYOCOSA0A1B0GUC4 107 aa6.46□□□□□ -1.38
CDK5RAP3-209ENST00000578663 SLC22A20A6NK97 555 aa6.46□□□□□ -1.38
CDK5RAP3-209ENST00000578663 OR7A17O14581 309 aa6.46□□□□□ -1.38
CDK5RAP3-209ENST00000578663 FGF17O60258 216 aa6.46□□□□□ -1.38
CDK5RAP3-209ENST00000578663 OR10H2O60403 315 aa6.46□□□□□ -1.38
CDK5RAP3-209ENST00000578663 ABCB7O75027 752 aa6.46□□□□□ -1.38
CDK5RAP3-209ENST00000578663 ADAM11O75078 769 aa6.46□□□□□ -1.38
CDK5RAP3-209ENST00000578663 H2AFYO75367 372 aaKnown RBP6.46□□□□□ -1.38
CDK5RAP3-209ENST00000578663 SUPT7LO94864 414 aa6.46□□□□□ -1.38
CDK5RAP3-209ENST00000578663 TGM6O95932 706 aa6.46□□□□□ -1.38
CDK5RAP3-209ENST00000578663 PLAUP00749 431 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms