RNA–Protein interactions for RNA: ENST00000578172.1

NDEL1-204, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

Gene NDEL1, Length 3,927 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-204ENST00000578172 BMP7P18075 431 aa12.84□□□□□ -0.35
NDEL1-204ENST00000578172 PTGS2P35354 604 aa12.84□□□□□ -0.35
NDEL1-204ENST00000578172 OPRD1P41143 372 aa12.84□□□□□ -0.35
NDEL1-204ENST00000578172 NAA10P41227 235 aaPredicted RBP12.84□□□□□ -0.35
NDEL1-204ENST00000578172 SMSP52788 366 aa12.84□□□□□ -0.35
NDEL1-204ENST00000578172 HCCSP53701 268 aa12.84□□□□□ -0.35
NDEL1-204ENST00000578172 C1orf61Q13536 156 aa12.84□□□□□ -0.35
NDEL1-204ENST00000578172 METTL2BQ6P1Q9 378 aaKnown RBP12.84□□□□□ -0.35
NDEL1-204ENST00000578172 CNIH2Q6PI25 160 aa12.84□□□□□ -0.35
NDEL1-204ENST00000578172 DEFB119Q8N690 84 aa12.84□□□□□ -0.35
NDEL1-204ENST00000578172 MINDY2Q8NBR6 621 aa12.84□□□□□ -0.35
NDEL1-204ENST00000578172 C9orf43Q8TAL5 461 aaPredicted RBP12.84□□□□□ -0.35
NDEL1-204ENST00000578172 PIGXQ8TBF5 258 aa12.84□□□□□ -0.35
NDEL1-204ENST00000578172 TMEM255BQ8WV15 326 aa12.84□□□□□ -0.35
NDEL1-204ENST00000578172 CDS1Q92903 461 aa12.84□□□□□ -0.35
NDEL1-204ENST00000578172 FGF13Q92913 245 aa12.84□□□□□ -0.35
NDEL1-204ENST00000578172 DHRS1Q96LJ7 313 aa12.84□□□□□ -0.35
NDEL1-204ENST00000578172 ATP13A2Q9NQ11 1180 aa12.84□□□□□ -0.35
NDEL1-204ENST00000578172 NAALAD2Q9Y3Q0 740 aa12.84□□□□□ -0.35
NDEL1-204ENST00000578172 TDRD6O60522 2096 aaKnown RBP12.84□□□□□ -0.35
NDEL1-204ENST00000578172 ZAR1LA6NP61 321 aa12.84□□□□□ -0.35
NDEL1-204ENST00000578172 FAAHO00519 579 aa12.84□□□□□ -0.35
NDEL1-204ENST00000578172 SMAD9O15198 467 aaKnown RBP12.84□□□□□ -0.35
NDEL1-204ENST00000578172 MOSPD3O75425 235 aa12.84□□□□□ -0.35
NDEL1-204ENST00000578172 RAB36O95755 333 aa12.84□□□□□ -0.35
NDEL1-204ENST00000578172 PAHP00439 452 aa12.84□□□□□ -0.35
NDEL1-204ENST00000578172 COX10Q12887 443 aa12.84□□□□□ -0.35
NDEL1-204ENST00000578172 ZNF77Q15935 545 aa12.84□□□□□ -0.35
NDEL1-204ENST00000578172 SYT14P1Q58G82 188 aa12.84□□□□□ -0.35
NDEL1-204ENST00000578172 FAM111BQ6SJ93 734 aa12.84□□□□□ -0.35
NDEL1-204ENST00000578172 RPTNQ6XPR3 784 aa12.84□□□□□ -0.35
NDEL1-204ENST00000578172 LINC01555Q8NAE3 123 aa12.84□□□□□ -0.35
NDEL1-204ENST00000578172 BEST4Q8NFU0 473 aa12.84□□□□□ -0.35
NDEL1-204ENST00000578172 OR52E1Q8NGJ3 308 aa12.84□□□□□ -0.35
NDEL1-204ENST00000578172 OR4C15Q8NGM1 316 aa12.84□□□□□ -0.35
NDEL1-204ENST00000578172 SERHL2Q9H4I8 314 aa12.84□□□□□ -0.35
NDEL1-204ENST00000578172 PHPT1Q9NRX4 125 aaPredicted RBP12.84□□□□□ -0.35
NDEL1-204ENST00000578172 SEC14L4Q9UDX3 406 aa12.84□□□□□ -0.35
NDEL1-204ENST00000578172 STUB1Q9UNE7 303 aa12.84□□□□□ -0.35
NDEL1-204ENST00000578172 WDR45Q9Y484 360 aa12.84□□□□□ -0.35
NDEL1-204ENST00000578172 PCDHGB1Q9Y5G3 927 aa12.84□□□□□ -0.35
NDEL1-204ENST00000578172 MED12Q93074 2177 aa12.84□□□□□ -0.35
NDEL1-204ENST00000578172 A0A087WUU8 490 aa12.84□□□□□ -0.35
NDEL1-204ENST00000578172 A0A1W2PR48 441 aa12.84□□□□□ -0.35
NDEL1-204ENST00000578172 NFATC1O95644 943 aa12.84□□□□□ -0.35
NDEL1-204ENST00000578172 AIFM1O95831 613 aa12.84□□□□□ -0.35
NDEL1-204ENST00000578172 BCL6P41182 706 aa12.84□□□□□ -0.35
NDEL1-204ENST00000578172 TAS2R38P59533 333 aa12.84□□□□□ -0.35
NDEL1-204ENST00000578172 EXOSC7Q15024 291 aaKnown RBP12.84□□□□□ -0.35
NDEL1-204ENST00000578172 OR52E4Q8NGH9 312 aa12.84□□□□□ -0.35
NDEL1-204ENST00000578172 LILRB4Q8NHJ6 448 aa12.84□□□□□ -0.35
NDEL1-204ENST00000578172 HMGB4Q8WW32 186 aa12.84□□□□□ -0.35
NDEL1-204ENST00000578172 SPRYD4Q8WW59 207 aaPredicted RBP12.84□□□□□ -0.35
NDEL1-204ENST00000578172 GPR174Q9BXC1 333 aa12.84□□□□□ -0.35
NDEL1-204ENST00000578172 SNX7Q9UNH6 387 aa12.84□□□□□ -0.35
NDEL1-204ENST00000578172 NOTCH4Q99466 2003 aa12.84□□□□□ -0.35
NDEL1-204ENST00000578172 MPZL2O60487 215 aa12.83□□□□□ -0.35
NDEL1-204ENST00000578172 CXCL10P02778 98 aa12.83□□□□□ -0.35
NDEL1-204ENST00000578172 LAMP2P13473 410 aa12.83□□□□□ -0.35
NDEL1-204ENST00000578172 PSMA3P25788 255 aa12.83□□□□□ -0.35
NDEL1-204ENST00000578172 TALDO1P37837 337 aa12.83□□□□□ -0.35
NDEL1-204ENST00000578172 KHKP50053 298 aa12.83□□□□□ -0.35
NDEL1-204ENST00000578172 WDR45BQ5MNZ6 344 aa12.83□□□□□ -0.35
NDEL1-204ENST00000578172 TANGO2Q6ICL3 276 aa12.83□□□□□ -0.35
NDEL1-204ENST00000578172 CHCHD4Q8N4Q1 142 aa12.83□□□□□ -0.35
NDEL1-204ENST00000578172 TMCO6Q96DC7 493 aa12.83□□□□□ -0.35
NDEL1-204ENST00000578172 CAMK1GQ96NX5 476 aa12.83□□□□□ -0.35
NDEL1-204ENST00000578172 ZNF559Q9BR84 538 aa12.83□□□□□ -0.35
NDEL1-204ENST00000578172 CPNE5Q9HCH3 593 aa12.83□□□□□ -0.35
NDEL1-204ENST00000578172 COL4A6Q14031 1691 aa12.83□□□□□ -0.36
NDEL1-204ENST00000578172 ISPDA4D126 451 aa12.83□□□□□ -0.36
NDEL1-204ENST00000578172 KAT7O95251 611 aa12.83□□□□□ -0.36
NDEL1-204ENST00000578172 SOD1P00441 154 aa12.83□□□□□ -0.36
NDEL1-204ENST00000578172 YES1P07947 543 aa12.83□□□□□ -0.36
NDEL1-204ENST00000578172 HOXB9P17482 250 aaPredicted RBP12.83□□□□□ -0.36
NDEL1-204ENST00000578172 BSGP35613 385 aa12.83□□□□□ -0.36
NDEL1-204ENST00000578172 PRR5P85299 388 aa12.83□□□□□ -0.36
NDEL1-204ENST00000578172 LARS2Q15031 903 aaKnown RBP12.83□□□□□ -0.36
NDEL1-204ENST00000578172 AGAP6Q5VW22 663 aa12.83□□□□□ -0.36
NDEL1-204ENST00000578172 SFTPA2Q8IWL1 248 aa12.83□□□□□ -0.36
NDEL1-204ENST00000578172 C7orf61Q8IZ16 206 aa12.83□□□□□ -0.36
NDEL1-204ENST00000578172 ZNF582Q96NG8 517 aaPredicted RBP12.83□□□□□ -0.36
NDEL1-204ENST00000578172 AMDHD1Q96NU7 426 aa12.83□□□□□ -0.36
NDEL1-204ENST00000578172 AGAP4Q96P64 663 aa12.83□□□□□ -0.36
NDEL1-204ENST00000578172 CCDC3Q9BQI4 270 aa12.83□□□□□ -0.36
NDEL1-204ENST00000578172 MKRN2Q9H000 416 aaKnown RBP12.83□□□□□ -0.36
NDEL1-204ENST00000578172 C3orf14Q9HBI5 128 aa12.83□□□□□ -0.36
NDEL1-204ENST00000578172 SEMA4GQ9NTN9 838 aa12.83□□□□□ -0.36
NDEL1-204ENST00000578172 TNFRSF10DQ9UBN6 386 aa12.83□□□□□ -0.36
NDEL1-204ENST00000578172 SLC7A7Q9UM01 511 aa12.83□□□□□ -0.36
NDEL1-204ENST00000578172 TRAV27A0A087WT01 109 aa12.83□□□□□ -0.36
NDEL1-204ENST00000578172 A0A0B4J203 849 aa12.83□□□□□ -0.36
NDEL1-204ENST00000578172 A0A1B0GVT2 93 aa12.83□□□□□ -0.36
NDEL1-204ENST00000578172 PRAMEF27A3QJZ7 478 aa12.83□□□□□ -0.36
NDEL1-204ENST00000578172 OR5F1O95221 314 aa12.83□□□□□ -0.36
NDEL1-204ENST00000578172 RPL4P36578 427 aaKnown RBP12.83□□□□□ -0.36
NDEL1-204ENST00000578172 SMIM11AP58511 58 aa12.83□□□□□ -0.36
NDEL1-204ENST00000578172 CSNK1G2P78368 415 aa12.83□□□□□ -0.36
NDEL1-204ENST00000578172 IRF4Q15306 451 aa12.83□□□□□ -0.36
NDEL1-204ENST00000578172 ANGPT1Q15389 498 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms