RNA–Protein interactions for RNA: ENST00000577578.5

CSNK1D-206, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 928 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-206ENST00000577578 TIMP3P35625 211 aa11.34□□□□□ -0.59
CSNK1D-206ENST00000577578 FRKP42685 505 aaPredicted RBP11.34□□□□□ -0.59
CSNK1D-206ENST00000577578 ETV4P43268 484 aa11.34□□□□□ -0.59
CSNK1D-206ENST00000577578 GAS1P54826 345 aa11.34□□□□□ -0.59
CSNK1D-206ENST00000577578 CYP27C1Q4G0S4 372 aa11.34□□□□□ -0.59
CSNK1D-206ENST00000577578 ACSF3Q4G176 576 aaPredicted RBP11.34□□□□□ -0.59
CSNK1D-206ENST00000577578 EIPR1Q53HC9 387 aa11.34□□□□□ -0.59
CSNK1D-206ENST00000577578 XKR7Q5GH72 579 aa11.34□□□□□ -0.59
CSNK1D-206ENST00000577578 TMEM107Q6UX40 140 aa11.34□□□□□ -0.59
CSNK1D-206ENST00000577578 MEX3BQ6ZN04 569 aaKnown RBP11.34□□□□□ -0.59
CSNK1D-206ENST00000577578 LIX1LQ8IVB5 337 aa11.34□□□□□ -0.59
CSNK1D-206ENST00000577578 CLYBLQ8N0X4 340 aa11.34□□□□□ -0.59
CSNK1D-206ENST00000577578 FAM83FQ8NEG4 500 aaPredicted RBP11.34□□□□□ -0.59
CSNK1D-206ENST00000577578 OR4N2Q8NGD1 307 aa11.34□□□□□ -0.59
CSNK1D-206ENST00000577578 CDC26Q8NHZ8 85 aa11.34□□□□□ -0.59
CSNK1D-206ENST00000577578 LMF2Q9BU23 707 aaKnown RBP11.34□□□□□ -0.59
CSNK1D-206ENST00000577578 MECRQ9BV79 373 aa11.34□□□□□ -0.59
CSNK1D-206ENST00000577578 UGT2B28Q9BY64 529 aa11.34□□□□□ -0.59
CSNK1D-206ENST00000577578 PARD6BQ9BYG5 372 aa11.34□□□□□ -0.59
CSNK1D-206ENST00000577578 OR2B2Q9GZK3 357 aa11.34□□□□□ -0.59
CSNK1D-206ENST00000577578 KLRF1Q9NZS2 232 aa11.34□□□□□ -0.59
CSNK1D-206ENST00000577578 NTMQ9P121 344 aa11.34□□□□□ -0.59
CSNK1D-206ENST00000577578 MRPS18CQ9Y3D5 142 aaKnown RBP11.34□□□□□ -0.59
CSNK1D-206ENST00000577578 TRAF6Q9Y4K3 522 aa11.34□□□□□ -0.59
CSNK1D-206ENST00000577578 WIF1Q9Y5W5 379 aa11.34□□□□□ -0.59
CSNK1D-206ENST00000577578 NUP214P35658 2090 aaPredicted RBP11.34□□□□□ -0.59
CSNK1D-206ENST00000577578 MED12LQ86YW9 2145 aa11.33□□□□□ -0.6
CSNK1D-206ENST00000577578 TEP1Q99973 2627 aaKnown RBP11.33□□□□□ -0.6
CSNK1D-206ENST00000577578 CD8B2A6NJW9 211 aa11.33□□□□□ -0.6
CSNK1D-206ENST00000577578 TMEM233B4DJY2 109 aa11.33□□□□□ -0.6
CSNK1D-206ENST00000577578 B4DXG7 233 aa11.33□□□□□ -0.6
CSNK1D-206ENST00000577578 CTIFO43310 598 aaKnown RBP11.33□□□□□ -0.6
CSNK1D-206ENST00000577578 SPAG7O75391 227 aa11.33□□□□□ -0.6
CSNK1D-206ENST00000577578 LINC00032P0C843 101 aa11.33□□□□□ -0.6
CSNK1D-206ENST00000577578 CPN1P15169 458 aa11.33□□□□□ -0.6
CSNK1D-206ENST00000577578 CREB1P16220 341 aa11.33□□□□□ -0.6
CSNK1D-206ENST00000577578 CEACAM8P31997 349 aaPredicted RBP11.33□□□□□ -0.6
CSNK1D-206ENST00000577578 KRT20P35900 424 aa11.33□□□□□ -0.6
CSNK1D-206ENST00000577578 MAP3K8P41279 467 aa11.33□□□□□ -0.6
CSNK1D-206ENST00000577578 MRPS22P82650 360 aaKnown RBP11.33□□□□□ -0.6
CSNK1D-206ENST00000577578 SF3B4Q15427 424 aaKnown RBP eCLIP11.33□□□□□ -0.61e-8■■■■■ 27.6
CSNK1D-206ENST00000577578 SLC25A35Q3KQZ1 300 aa11.33□□□□□ -0.6
CSNK1D-206ENST00000577578 WIPI1Q5MNZ9 446 aaPredicted RBP11.33□□□□□ -0.6
CSNK1D-206ENST00000577578 DCST1Q5T197 706 aa11.33□□□□□ -0.6
CSNK1D-206ENST00000577578 NSUN5P2Q63ZY6 315 aa11.33□□□□□ -0.6
CSNK1D-206ENST00000577578 LARP4Q71RC2 724 aaKnown RBP eCLIP11.33□□□□□ -0.6
CSNK1D-206ENST00000577578 PLCZ1Q86YW0 608 aa11.33□□□□□ -0.6
CSNK1D-206ENST00000577578 LACC1Q8IV20 430 aa11.33□□□□□ -0.6
CSNK1D-206ENST00000577578 SLC44A2Q8IWA5 706 aaPredicted RBP11.33□□□□□ -0.6
CSNK1D-206ENST00000577578 DMRTC2Q8IXT2 367 aaPredicted RBP11.33□□□□□ -0.6
CSNK1D-206ENST00000577578 OR10Q1Q8NGQ4 319 aa11.33□□□□□ -0.6
CSNK1D-206ENST00000577578 TWIST2Q8WVJ9 160 aa11.33□□□□□ -0.6
CSNK1D-206ENST00000577578 MTERF3Q96E29 417 aa11.33□□□□□ -0.6
CSNK1D-206ENST00000577578 WDYHV1Q96HA8 205 aa11.33□□□□□ -0.6
CSNK1D-206ENST00000577578 LURAP1Q96LR2 239 aa11.33□□□□□ -0.6
CSNK1D-206ENST00000577578 REEP4Q9H6H4 257 aa11.33□□□□□ -0.6
CSNK1D-206ENST00000577578 EML4Q9HC35 981 aaKnown RBP11.33□□□□□ -0.6
CSNK1D-206ENST00000577578 SERHLQ9NQF3 203 aa11.33□□□□□ -0.6
CSNK1D-206ENST00000577578 DDX18Q9NVP1 670 aaKnown RBP11.33□□□□□ -0.6
CSNK1D-206ENST00000577578 ALKBH4Q9NXW9 302 aa11.33□□□□□ -0.6
CSNK1D-206ENST00000577578 RAB21Q9UL25 225 aa11.33□□□□□ -0.6
CSNK1D-206ENST00000577578 SLC6A5Q9Y345 797 aa11.33□□□□□ -0.6
CSNK1D-206ENST00000577578 C2orf72A6NCS6 295 aa11.32□□□□□ -0.6
CSNK1D-206ENST00000577578 TTC36A6NLP5 189 aa11.32□□□□□ -0.6
CSNK1D-206ENST00000577578 ENO4A6NNW6 628 aa11.32□□□□□ -0.6
CSNK1D-206ENST00000577578 HSPB2A8KAH6 182 aa11.32□□□□□ -0.6
CSNK1D-206ENST00000577578 PIP5K1BO14986 540 aa11.32□□□□□ -0.6
CSNK1D-206ENST00000577578 FADS1O60427 444 aa11.32□□□□□ -0.6
CSNK1D-206ENST00000577578 BPGMP07738 259 aa11.32□□□□□ -0.6
CSNK1D-206ENST00000577578 IL12BP29460 328 aa11.32□□□□□ -0.6
CSNK1D-206ENST00000577578 SRD5A2P31213 254 aa11.32□□□□□ -0.6
CSNK1D-206ENST00000577578 ASMTP46597 345 aa11.32□□□□□ -0.6
CSNK1D-206ENST00000577578 GFRA1P56159 465 aa11.32□□□□□ -0.6
CSNK1D-206ENST00000577578 RPL38P63173 70 aaKnown RBP11.32□□□□□ -0.6
CSNK1D-206ENST00000577578 ZNF844Q08AG5 666 aa11.32□□□□□ -0.6
CSNK1D-206ENST00000577578 ZNF155Q12901 538 aaPredicted RBP11.32□□□□□ -0.6
CSNK1D-206ENST00000577578 GAB1Q13480 694 aa11.32□□□□□ -0.6
CSNK1D-206ENST00000577578 TOMM20Q15388 145 aa11.32□□□□□ -0.6
CSNK1D-206ENST00000577578 HSPB2Q16082 182 aa11.32□□□□□ -0.6
CSNK1D-206ENST00000577578 ZNF385BQ569K4 471 aa11.32□□□□□ -0.6
CSNK1D-206ENST00000577578 POMZP3Q6PJE2 187 aa11.32□□□□□ -0.6
CSNK1D-206ENST00000577578 ZNF551Q7Z340 670 aaPredicted RBP11.32□□□□□ -0.6
CSNK1D-206ENST00000577578 YRDCQ86U90 279 aaKnown RBP11.32□□□□□ -0.6
CSNK1D-206ENST00000577578 NAXEQ8NCW5 288 aa11.32□□□□□ -0.6
CSNK1D-206ENST00000577578 ZPLD1Q8TCW7 415 aa11.32□□□□□ -0.6
CSNK1D-206ENST00000577578 ABTB1Q969K4 478 aaPredicted RBP11.32□□□□□ -0.6
CSNK1D-206ENST00000577578 EFHD2Q96C19 240 aaPredicted RBP11.32□□□□□ -0.6
CSNK1D-206ENST00000577578 PPCDCQ96CD2 204 aa11.32□□□□□ -0.6
CSNK1D-206ENST00000577578 TSSK3Q96PN8 268 aa11.32□□□□□ -0.6
CSNK1D-206ENST00000577578 MCCC2Q9HCC0 563 aa11.32□□□□□ -0.6
CSNK1D-206ENST00000577578 ACSS1Q9NUB1 689 aaPredicted RBP11.32□□□□□ -0.6
CSNK1D-206ENST00000577578 ZNF629Q9UEG4 869 aaPredicted RBP11.32□□□□□ -0.6
CSNK1D-206ENST00000577578 ABCG2Q9UNQ0 655 aa11.32□□□□□ -0.6
CSNK1D-206ENST00000577578 MAPRE3Q9UPY8 281 aa11.32□□□□□ -0.6
CSNK1D-206ENST00000577578 FIS1Q9Y3D6 152 aa11.32□□□□□ -0.6
CSNK1D-206ENST00000577578 OR10H1Q9Y4A9 318 aa11.32□□□□□ -0.6
CSNK1D-206ENST00000577578 HRNRQ86YZ3 2850 aaPredicted RBP11.32□□□□□ -0.6
CSNK1D-206ENST00000577578 AKAP9Q99996 3911 aa11.31□□□□□ -0.6
CSNK1D-206ENST00000577578 MBD3L4A6NDZ8 208 aaPredicted RBP11.31□□□□□ -0.6
CSNK1D-206ENST00000577578 MBD3L3A6NE82 208 aaPredicted RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms