RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 WFDC8Q8IUA0 241 aa8.09□□□□□ -1.11
SMG6-218ENST00000575454 ZBED8Q8IZ13 594 aa8.09□□□□□ -1.11
SMG6-218ENST00000575454 SAMD14Q8IZD0 417 aaPredicted RBP8.09□□□□□ -1.11
SMG6-218ENST00000575454 METTL25Q8N6Q8 603 aa8.09□□□□□ -1.11
SMG6-218ENST00000575454 MAPK1IP1LQ8NDC0 245 aa8.09□□□□□ -1.11
SMG6-218ENST00000575454 STEAP2Q8NFT2 490 aa8.09□□□□□ -1.11
SMG6-218ENST00000575454 RHEBL1Q8TAI7 183 aa8.09□□□□□ -1.11
SMG6-218ENST00000575454 FNDC9Q8TBE3 224 aa8.09□□□□□ -1.11
SMG6-218ENST00000575454 WDR20Q8TBZ3 569 aa8.09□□□□□ -1.11
SMG6-218ENST00000575454 PYROXD1Q8WU10 500 aa8.09□□□□□ -1.11
SMG6-218ENST00000575454 FBXW5Q969U6 566 aa8.09□□□□□ -1.11
SMG6-218ENST00000575454 GMPPAQ96IJ6 420 aaPredicted RBP8.09□□□□□ -1.11
SMG6-218ENST00000575454 BTBD9Q96Q07 612 aa8.09□□□□□ -1.11
SMG6-218ENST00000575454 ATOH8Q96SQ7 321 aa8.09□□□□□ -1.11
SMG6-218ENST00000575454 USB1Q9BQ65 265 aaKnown RBP8.09□□□□□ -1.11
SMG6-218ENST00000575454 FAIM2Q9BWQ8 316 aa8.09□□□□□ -1.11
SMG6-218ENST00000575454 HDHD5Q9BXW7 423 aa8.09□□□□□ -1.11
SMG6-218ENST00000575454 PRRG4Q9BZD6 226 aa8.09□□□□□ -1.11
SMG6-218ENST00000575454 IPPKQ9H8X2 491 aa8.09□□□□□ -1.11
SMG6-218ENST00000575454 LRTM1Q9HBL6 345 aa8.09□□□□□ -1.11
SMG6-218ENST00000575454 HHATLQ9HCP6 504 aa8.09□□□□□ -1.11
SMG6-218ENST00000575454 NMRK1Q9NWW6 199 aa8.09□□□□□ -1.11
SMG6-218ENST00000575454 PPP4R1LQ9P1A2 415 aa8.09□□□□□ -1.11
SMG6-218ENST00000575454 WHRNQ9P202 907 aa8.09□□□□□ -1.11
SMG6-218ENST00000575454 LPAR3Q9UBY5 353 aa8.09□□□□□ -1.11
SMG6-218ENST00000575454 CES1P1Q9UKY3 287 aa8.09□□□□□ -1.11
SMG6-218ENST00000575454 PCDHA9Q9Y5H5 950 aa8.09□□□□□ -1.11
SMG6-218ENST00000575454 AP4B1Q9Y6B7 739 aa8.09□□□□□ -1.11
SMG6-218ENST00000575454 SEC14L5O43304 696 aa8.08□□□□□ -1.12
SMG6-218ENST00000575454 ERAL1O75616 437 aaKnown RBP8.08□□□□□ -1.12
SMG6-218ENST00000575454 SEC31AO94979 1220 aaKnown RBP8.08□□□□□ -1.12
SMG6-218ENST00000575454 LTA4HP09960 611 aaKnown RBP8.08□□□□□ -1.12
SMG6-218ENST00000575454 PYGBP11216 843 aa8.08□□□□□ -1.12
SMG6-218ENST00000575454 PSMB1P20618 241 aaKnown RBP8.08□□□□□ -1.12
SMG6-218ENST00000575454 TCEA1P23193 301 aaKnown RBP8.08□□□□□ -1.12
SMG6-218ENST00000575454 CLK3P49761 638 aaKnown RBP8.08□□□□□ -1.12
SMG6-218ENST00000575454 EMDP50402 254 aa8.08□□□□□ -1.12
SMG6-218ENST00000575454 ALDH18A1P54886 795 aaKnown RBP8.08□□□□□ -1.12
SMG6-218ENST00000575454 CLDN15P56746 228 aa8.08□□□□□ -1.12
SMG6-218ENST00000575454 GPX6P59796 221 aa8.08□□□□□ -1.12
SMG6-218ENST00000575454 DR1Q01658 176 aa8.08□□□□□ -1.12
SMG6-218ENST00000575454 IFT88Q13099 833 aa8.08□□□□□ -1.12
SMG6-218ENST00000575454 GTF2H2Q13888 395 aa8.08□□□□□ -1.12
SMG6-218ENST00000575454 PFKFB4Q16877 469 aa8.08□□□□□ -1.12
SMG6-218ENST00000575454 FAM83EQ2M2I3 478 aa8.08□□□□□ -1.12
SMG6-218ENST00000575454 ERCC6LQ2NKX8 1250 aa8.08□□□□□ -1.12
SMG6-218ENST00000575454 FRG2Q64ET8 278 aa8.08□□□□□ -1.12
SMG6-218ENST00000575454 TTC19Q6DKK2 380 aaPredicted RBP8.08□□□□□ -1.12
SMG6-218ENST00000575454 GTF2IRD2BQ6EKJ0 949 aa8.08□□□□□ -1.12
SMG6-218ENST00000575454 GTF2H2CQ6P1K8 395 aa8.08□□□□□ -1.12
SMG6-218ENST00000575454 FAM111BQ6SJ93 734 aa8.08□□□□□ -1.12
SMG6-218ENST00000575454 DNAJC14Q6Y2X3 702 aaPredicted RBP8.08□□□□□ -1.12
SMG6-218ENST00000575454 GTF2IRD2Q86UP8 949 aa8.08□□□□□ -1.12
SMG6-218ENST00000575454 FADS6Q8N9I5 356 aa8.08□□□□□ -1.12
SMG6-218ENST00000575454 SMAP2Q8WU79 429 aaPredicted RBP8.08□□□□□ -1.12
SMG6-218ENST00000575454 RNF138Q8WVD3 245 aa8.08□□□□□ -1.12
SMG6-218ENST00000575454 ATP6V1E2Q96A05 226 aa8.08□□□□□ -1.12
SMG6-218ENST00000575454 KLHL29Q96CT2 875 aa8.08□□□□□ -1.12
SMG6-218ENST00000575454 HS6ST2Q96MM7 605 aa8.08□□□□□ -1.12
SMG6-218ENST00000575454 FRG2BQ96QU4 278 aa8.08□□□□□ -1.12
SMG6-218ENST00000575454 RHNO1Q9BSD3 238 aa8.08□□□□□ -1.12
SMG6-218ENST00000575454 BEX2Q9BXY8 128 aa8.08□□□□□ -1.12
SMG6-218ENST00000575454 ACTR6Q9GZN1 396 aa8.08□□□□□ -1.12
SMG6-218ENST00000575454 SLCO5A1Q9H2Y9 848 aa8.08□□□□□ -1.12
SMG6-218ENST00000575454 DSN1Q9H410 356 aa8.08□□□□□ -1.12
SMG6-218ENST00000575454 ESRP2Q9H6T0 727 aaKnown RBP8.08□□□□□ -1.12
SMG6-218ENST00000575454 SAYSD1Q9NPB0 183 aa8.08□□□□□ -1.12
SMG6-218ENST00000575454 SMYD2Q9NRG4 433 aa8.08□□□□□ -1.12
SMG6-218ENST00000575454 FAIMQ9NVQ4 179 aa8.08□□□□□ -1.12
SMG6-218ENST00000575454 TMEM160Q9NX00 188 aa8.08□□□□□ -1.12
SMG6-218ENST00000575454 PPP2R2CQ9Y2T4 447 aa8.08□□□□□ -1.12
SMG6-218ENST00000575454 RNF11Q9Y3C5 154 aa8.08□□□□□ -1.12
SMG6-218ENST00000575454 ZNF337Q9Y3M9 751 aa8.08□□□□□ -1.12
SMG6-218ENST00000575454 RNF115Q9Y4L5 304 aa8.08□□□□□ -1.12
SMG6-218ENST00000575454 OR2M5A3KFT3 312 aa8.07□□□□□ -1.12
SMG6-218ENST00000575454 CXorf49A8MYA2 514 aaPredicted RBP8.07□□□□□ -1.12
SMG6-218ENST00000575454 TSPAN2O60636 221 aa8.07□□□□□ -1.12
SMG6-218ENST00000575454 SS18L1O75177 396 aaPredicted RBP8.07□□□□□ -1.12
SMG6-218ENST00000575454 PLAUP00749 431 aa8.07□□□□□ -1.12
SMG6-218ENST00000575454 CD3EP07766 207 aa8.07□□□□□ -1.12
SMG6-218ENST00000575454 DANCRP0C864 163 aa8.07□□□□□ -1.12
SMG6-218ENST00000575454 CT45A8P0DMV1 189 aa8.07□□□□□ -1.12
SMG6-218ENST00000575454 CT45A9P0DMV2 189 aa8.07□□□□□ -1.12
SMG6-218ENST00000575454 MTHFD2P13995 350 aa8.07□□□□□ -1.12
SMG6-218ENST00000575454 PCSK2P16519 638 aa8.07□□□□□ -1.12
SMG6-218ENST00000575454 EVI2BP34910 448 aa8.07□□□□□ -1.12
SMG6-218ENST00000575454 ARL1P40616 181 aaPredicted RBP8.07□□□□□ -1.12
SMG6-218ENST00000575454 SUCLG1P53597 346 aaKnown RBP8.07□□□□□ -1.12
SMG6-218ENST00000575454 GAS1P54826 345 aa8.07□□□□□ -1.12
SMG6-218ENST00000575454 DSCR9P59020 149 aa8.07□□□□□ -1.12
SMG6-218ENST00000575454 TRA2BP62995 288 aaKnown RBP8.07□□□□□ -1.12
SMG6-218ENST00000575454 FASTKD3Q14CZ7 662 aaKnown RBP8.07□□□□□ -1.12
SMG6-218ENST00000575454 TRMT12Q53H54 448 aaKnown RBP8.07□□□□□ -1.12
SMG6-218ENST00000575454 CT45A2Q5DJT8 189 aa8.07□□□□□ -1.12
SMG6-218ENST00000575454 KLC3Q6P597 504 aa8.07□□□□□ -1.12
SMG6-218ENST00000575454 GOLGA7Q7Z5G4 137 aa8.07□□□□□ -1.12
SMG6-218ENST00000575454 METTL4Q8N3J2 472 aa8.07□□□□□ -1.12
SMG6-218ENST00000575454 ZNF675Q8TD23 568 aa8.07□□□□□ -1.12
SMG6-218ENST00000575454 HSD17B8Q92506 261 aa8.07□□□□□ -1.12
SMG6-218ENST00000575454 C11orf24Q96F05 449 aaPredicted RBP8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms