RNA–Protein interactions for RNA: ENST00000573550.5

CDC27-215, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-215ENST00000573550 ZNF829Q3KNS6 432 aaPredicted RBP4.5□□□□□ -1.69
CDC27-215ENST00000573550 KRTAP24-1Q3LI83 254 aa4.5□□□□□ -1.69
CDC27-215ENST00000573550 MS4A13Q5J8X5 152 aa4.5□□□□□ -1.69
CDC27-215ENST00000573550 CDKL4Q5MAI5 379 aa4.5□□□□□ -1.69
CDC27-215ENST00000573550 RBM48Q5RL73 367 aaKnown RBP4.5□□□□□ -1.69
CDC27-215ENST00000573550 CCNYL2Q5T2Q4 361 aa4.5□□□□□ -1.69
CDC27-215ENST00000573550 DUS1LQ6P1R4 473 aaKnown RBP4.5□□□□□ -1.69
CDC27-215ENST00000573550 IYDQ6PHW0 289 aa4.5□□□□□ -1.69
CDC27-215ENST00000573550 TTC33Q6PID6 262 aaPredicted RBP4.5□□□□□ -1.69
CDC27-215ENST00000573550 ZNF773Q6PK81 442 aa4.5□□□□□ -1.69
CDC27-215ENST00000573550 CD300LGQ6UXG3 332 aa4.5□□□□□ -1.69
CDC27-215ENST00000573550 MSANTD1Q6ZTZ1 278 aa4.5□□□□□ -1.69
CDC27-215ENST00000573550 MOB2Q70IA6 237 aa4.5□□□□□ -1.69
CDC27-215ENST00000573550 ADAMTSL2Q86TH1 951 aa4.5□□□□□ -1.69
CDC27-215ENST00000573550 ZFAND4Q86XD8 727 aa4.5□□□□□ -1.69
CDC27-215ENST00000573550 NRROSQ86YC3 692 aa4.5□□□□□ -1.69
CDC27-215ENST00000573550 FAM9CQ8IZT9 166 aa4.5□□□□□ -1.69
CDC27-215ENST00000573550 BEST3Q8N1M1 668 aa4.5□□□□□ -1.69
CDC27-215ENST00000573550 STK40Q8N2I9 435 aa4.5□□□□□ -1.69
CDC27-215ENST00000573550 SVOPLQ8N434 492 aa4.5□□□□□ -1.69
CDC27-215ENST00000573550 FBXO39Q8N4B4 442 aa4.5□□□□□ -1.69
CDC27-215ENST00000573550 CBR4Q8N4T8 237 aa4.5□□□□□ -1.69
CDC27-215ENST00000573550 DHRSXQ8N5I4 330 aa4.5□□□□□ -1.69
CDC27-215ENST00000573550 RNF148Q8N7C7 305 aa4.5□□□□□ -1.69
CDC27-215ENST00000573550 TMEM116Q8NCL8 245 aa4.5□□□□□ -1.69
CDC27-215ENST00000573550 CSNK2A3Q8NEV1 391 aa4.5□□□□□ -1.69
CDC27-215ENST00000573550 OR56A4Q8NGH8 313 aa4.5□□□□□ -1.69
CDC27-215ENST00000573550 OR4L1Q8NH43 312 aa4.5□□□□□ -1.69
CDC27-215ENST00000573550 BBS10Q8TAM1 723 aa4.5□□□□□ -1.69
CDC27-215ENST00000573550 C2orf15Q8WU43 125 aaKnown RBP4.5□□□□□ -1.69
CDC27-215ENST00000573550 RAB2BQ8WUD1 216 aa4.5□□□□□ -1.69
CDC27-215ENST00000573550 UBTD2Q8WUN7 234 aa4.5□□□□□ -1.69
CDC27-215ENST00000573550 ANKRD49Q8WVL7 239 aa4.5□□□□□ -1.69
CDC27-215ENST00000573550 CANT1Q8WVQ1 401 aa4.5□□□□□ -1.69
CDC27-215ENST00000573550 BORCS5Q969J3 196 aa4.5□□□□□ -1.69
CDC27-215ENST00000573550 ITFG2Q969R8 447 aa4.5□□□□□ -1.69
CDC27-215ENST00000573550 PPWD1Q96BP3 646 aaKnown RBP4.5□□□□□ -1.69
CDC27-215ENST00000573550 ISOC1Q96CN7 298 aa4.5□□□□□ -1.69
CDC27-215ENST00000573550 NRBF2Q96F24 287 aa4.5□□□□□ -1.69
CDC27-215ENST00000573550 SPATA17Q96L03 361 aa4.5□□□□□ -1.69
CDC27-215ENST00000573550 ACOX2Q99424 681 aa4.5□□□□□ -1.69
CDC27-215ENST00000573550 KCTD14Q9BQ13 255 aaPredicted RBP4.5□□□□□ -1.69
CDC27-215ENST00000573550 MAGIXQ9H6Y5 334 aa4.5□□□□□ -1.69
CDC27-215ENST00000573550 CWH43Q9H720 699 aa4.5□□□□□ -1.69
CDC27-215ENST00000573550 NOL11Q9H8H0 719 aaKnown RBP4.5□□□□□ -1.69
CDC27-215ENST00000573550 GPN2Q9H9Y4 310 aaPredicted RBP4.5□□□□□ -1.69
CDC27-215ENST00000573550 SEBOXQ9HB31 216 aaPredicted RBP4.5□□□□□ -1.69
CDC27-215ENST00000573550 MID1IP1Q9NPA3 183 aa4.5□□□□□ -1.69
CDC27-215ENST00000573550 ACSS1Q9NUB1 689 aaPredicted RBP4.5□□□□□ -1.69
CDC27-215ENST00000573550 CMTM6Q9NX76 183 aa4.5□□□□□ -1.69
CDC27-215ENST00000573550 GIN1Q9NXP7 522 aa4.5□□□□□ -1.69
CDC27-215ENST00000573550 USE1Q9NZ43 259 aa4.5□□□□□ -1.69
CDC27-215ENST00000573550 NUDT4Q9NZJ9 180 aa4.5□□□□□ -1.69
CDC27-215ENST00000573550 PKD2L2Q9NZM6 624 aa4.5□□□□□ -1.69
CDC27-215ENST00000573550 MARCH4Q9P2E8 410 aaPredicted RBP4.5□□□□□ -1.69
CDC27-215ENST00000573550 UXTQ9UBK9 157 aaPredicted RBP4.5□□□□□ -1.69
CDC27-215ENST00000573550 SUN2Q9UH99 717 aa4.5□□□□□ -1.69
CDC27-215ENST00000573550 PCTPQ9UKL6 214 aa4.5□□□□□ -1.69
CDC27-215ENST00000573550 BLOC1S6Q9UL45 172 aa4.5□□□□□ -1.69
CDC27-215ENST00000573550 PADI3Q9ULW8 664 aa4.5□□□□□ -1.69
CDC27-215ENST00000573550 NAALAD2Q9Y3Q0 740 aa4.5□□□□□ -1.69
CDC27-215ENST00000573550 LOXL2Q9Y4K0 774 aa4.5□□□□□ -1.69
CDC27-215ENST00000573550 SCN8AQ9UQD0 1980 aa4.5□□□□□ -1.69
CDC27-215ENST00000573550 VWA8A3KMH1 1905 aa4.49□□□□□ -1.69
CDC27-215ENST00000573550 CCDC162PA2VCL2 907 aa4.49□□□□□ -1.69
CDC27-215ENST00000573550 CASTOR2A6NHX0 329 aa4.49□□□□□ -1.69
CDC27-215ENST00000573550 LILRA5A6NI73 299 aa4.49□□□□□ -1.69
CDC27-215ENST00000573550 H3BMM5 538 aa4.49□□□□□ -1.69
CDC27-215ENST00000573550 H3BMQ9 156 aa4.49□□□□□ -1.69
CDC27-215ENST00000573550 EI24O14681 340 aa4.49□□□□□ -1.69
CDC27-215ENST00000573550 CLOCKO15516 846 aa4.49□□□□□ -1.69
CDC27-215ENST00000573550 XPNPEP2O43895 674 aa4.49□□□□□ -1.69
CDC27-215ENST00000573550 VPS26AO75436 327 aa4.49□□□□□ -1.69
CDC27-215ENST00000573550 SLC22A3O75751 556 aa4.49□□□□□ -1.69
CDC27-215ENST00000573550 NKX2-2O95096 273 aa4.49□□□□□ -1.69
CDC27-215ENST00000573550 CSPG5O95196 566 aa4.49□□□□□ -1.69
CDC27-215ENST00000573550 TSPAN12O95859 305 aa4.49□□□□□ -1.69
CDC27-215ENST00000573550 GOT2P00505 430 aaKnown RBP4.49□□□□□ -1.69
CDC27-215ENST00000573550 CHRNA1P02708 482 aa4.49□□□□□ -1.69
CDC27-215ENST00000573550 CLEC3BP05452 202 aa4.49□□□□□ -1.69
CDC27-215ENST00000573550 UMODP07911 640 aa4.49□□□□□ -1.69
CDC27-215ENST00000573550 RETP07949 1114 aa4.49□□□□□ -1.69
CDC27-215ENST00000573550 ZDHHC11BP0C7U3 371 aa4.49□□□□□ -1.69
CDC27-215ENST00000573550 MYOD1P15172 320 aa4.49□□□□□ -1.69
CDC27-215ENST00000573550 CD1EP15812 388 aa4.49□□□□□ -1.69
CDC27-215ENST00000573550 ZNF182P17025 639 aaPredicted RBP4.49□□□□□ -1.69
CDC27-215ENST00000573550 TCN1P20061 433 aaPredicted RBP4.49□□□□□ -1.69
CDC27-215ENST00000573550 RPS3P23396 243 aaKnown RBP eCLIP4.49□□□□□ -1.69
CDC27-215ENST00000573550 EEF1DP29692 281 aaKnown RBP4.49□□□□□ -1.69
CDC27-215ENST00000573550 OXTRP30559 389 aa4.49□□□□□ -1.69
CDC27-215ENST00000573550 BSGP35613 385 aa4.49□□□□□ -1.69
CDC27-215ENST00000573550 PTGER3P43115 390 aa4.49□□□□□ -1.69
CDC27-215ENST00000573550 ZFP36L2P47974 494 aaKnown RBP4.49□□□□□ -1.69
CDC27-215ENST00000573550 FASLGP48023 281 aa4.49□□□□□ -1.69
CDC27-215ENST00000573550 ALDH3A2P51648 485 aa4.49□□□□□ -1.69
CDC27-215ENST00000573550 F2RL1P55085 397 aa4.49□□□□□ -1.69
CDC27-215ENST00000573550 ADARB1P78563 741 aaKnown RBP4.49□□□□□ -1.69
CDC27-215ENST00000573550 SLC10A7Q0GE19 358 aa4.49□□□□□ -1.69
CDC27-215ENST00000573550 GK3PQ14409 553 aa4.49□□□□□ -1.69
CDC27-215ENST00000573550 CYTH1Q15438 398 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms