RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 KIF2AO00139 706 aaPredicted RBP16.42■□□□□ 0.22
CHD3-214ENST00000572579 MYL2P10916 166 aa16.42■□□□□ 0.22
CHD3-214ENST00000572579 TCEA1P23193 301 aaKnown RBP16.42■□□□□ 0.22
CHD3-214ENST00000572579 GRK2P25098 689 aa16.42■□□□□ 0.22
CHD3-214ENST00000572579 SRD5A2P31213 254 aa16.42■□□□□ 0.22
CHD3-214ENST00000572579 MPIP34949 423 aa16.42■□□□□ 0.22
CHD3-214ENST00000572579 GAB1Q13480 694 aa16.42■□□□□ 0.22
CHD3-214ENST00000572579 DAZAP2Q15038 168 aaPredicted RBP16.42■□□□□ 0.22
CHD3-214ENST00000572579 TMEM107Q6UX40 140 aa16.42■□□□□ 0.22
CHD3-214ENST00000572579 FAM9CQ8IZT9 166 aa16.42■□□□□ 0.22
CHD3-214ENST00000572579 FAM222BQ8WU58 562 aa16.42■□□□□ 0.22
CHD3-214ENST00000572579 POLDIP3Q9BY77 421 aaKnown RBP16.42■□□□□ 0.22
CHD3-214ENST00000572579 SLC24A3Q9HC58 644 aa16.42■□□□□ 0.22
CHD3-214ENST00000572579 CCM2LQ9NUG4 571 aaPredicted RBP16.42■□□□□ 0.22
CHD3-214ENST00000572579 CLCF1Q9UBD9 225 aa16.42■□□□□ 0.22
CHD3-214ENST00000572579 C19orf53Q9UNZ5 99 aaPredicted RBP16.42■□□□□ 0.22
CHD3-214ENST00000572579 STK38LQ9Y2H1 464 aa16.42■□□□□ 0.22
CHD3-214ENST00000572579 RPH3AQ9Y2J0 694 aaPredicted RBP16.42■□□□□ 0.22
CHD3-214ENST00000572579 ARHGAP21Q5T5U3 1957 aa16.42■□□□□ 0.22
CHD3-214ENST00000572579 ABCA4P78363 2273 aa16.42■□□□□ 0.22
CHD3-214ENST00000572579 MPDZO75970 2070 aa16.41■□□□□ 0.22
CHD3-214ENST00000572579 A0A087WV62 115 aa16.41■□□□□ 0.22
CHD3-214ENST00000572579 CLCA1A8K7I4 914 aa16.41■□□□□ 0.22
CHD3-214ENST00000572579 PLOD2O00469 737 aa16.41■□□□□ 0.22
CHD3-214ENST00000572579 FADS1O60427 444 aa16.41■□□□□ 0.22
CHD3-214ENST00000572579 ABCB7O75027 752 aa16.41■□□□□ 0.22
CHD3-214ENST00000572579 RCBTB2O95199 551 aa16.41■□□□□ 0.22
CHD3-214ENST00000572579 TGM6O95932 706 aa16.41■□□□□ 0.22
CHD3-214ENST00000572579 IL18BPO95998 194 aa16.41■□□□□ 0.22
CHD3-214ENST00000572579 CRHR1P34998 444 aa16.41■□□□□ 0.22
CHD3-214ENST00000572579 NCBP2P52298 156 aaKnown RBP eCLIP16.41■□□□□ 0.22
CHD3-214ENST00000572579 PNLIPRP2P54317 469 aa16.41■□□□□ 0.22
CHD3-214ENST00000572579 ZNF763Q0D2J5 394 aa16.41■□□□□ 0.22
CHD3-214ENST00000572579 FLYWCH1Q4VC44 716 aa16.41■□□□□ 0.22
CHD3-214ENST00000572579 CLEC6AQ6EIG7 209 aa16.41■□□□□ 0.22
CHD3-214ENST00000572579 NOXRED1Q6NXP6 359 aa16.41■□□□□ 0.22
CHD3-214ENST00000572579 Q6ZSR9 355 aa16.41■□□□□ 0.22
CHD3-214ENST00000572579 CDC20BQ86Y33 519 aa16.41■□□□□ 0.22
CHD3-214ENST00000572579 SAMD14Q8IZD0 417 aaPredicted RBP16.41■□□□□ 0.22
CHD3-214ENST00000572579 OR2L13Q8N349 312 aa16.41■□□□□ 0.22
CHD3-214ENST00000572579 FADS6Q8N9I5 356 aa16.41■□□□□ 0.22
CHD3-214ENST00000572579 OR2T11Q8NH01 316 aa16.41■□□□□ 0.22
CHD3-214ENST00000572579 CDC26Q8NHZ8 85 aa16.41■□□□□ 0.22
CHD3-214ENST00000572579 AMDHD1Q96NU7 426 aa16.41■□□□□ 0.22
CHD3-214ENST00000572579 BBS4Q96RK4 519 aa16.41■□□□□ 0.22
CHD3-214ENST00000572579 CXXC4Q9H2H0 198 aa16.41■□□□□ 0.22
CHD3-214ENST00000572579 CLEC4MQ9H2X3 399 aaPredicted RBP16.41■□□□□ 0.22
CHD3-214ENST00000572579 TUBB1Q9H4B7 451 aa16.41■□□□□ 0.22
CHD3-214ENST00000572579 MYNNQ9NPC7 610 aa16.41■□□□□ 0.22
CHD3-214ENST00000572579 OXSMQ9NWU1 459 aa16.41■□□□□ 0.22
CHD3-214ENST00000572579 MRPS18CQ9Y3D5 142 aaKnown RBP16.41■□□□□ 0.22
CHD3-214ENST00000572579 NPIPB8E9PQR5 432 aa16.4■□□□□ 0.22
CHD3-214ENST00000572579 H0YC42 278 aa16.4■□□□□ 0.22
CHD3-214ENST00000572579 GLRA3O75311 464 aa16.4■□□□□ 0.22
CHD3-214ENST00000572579 TMIGD3P0DMS9 266 aaPredicted RBP16.4■□□□□ 0.22
CHD3-214ENST00000572579 ZNF708P17019 499 aa16.4■□□□□ 0.22
CHD3-214ENST00000572579 TPD52P55327 224 aaPredicted RBP16.4■□□□□ 0.22
CHD3-214ENST00000572579 EFR3AQ14156 821 aa16.4■□□□□ 0.22
CHD3-214ENST00000572579 ERCC6LQ2NKX8 1250 aa16.4■□□□□ 0.22
CHD3-214ENST00000572579 ANKRD26P1Q6NSI1 321 aa16.4■□□□□ 0.22
CHD3-214ENST00000572579 APOOLQ6UXV4 268 aa16.4■□□□□ 0.22
CHD3-214ENST00000572579 EPS8L3Q8TE67 593 aaKnown RBP16.4■□□□□ 0.22
CHD3-214ENST00000572579 INTS12Q96CB8 462 aaKnown RBP16.4■□□□□ 0.22
CHD3-214ENST00000572579 ELP4Q96EB1 424 aa16.4■□□□□ 0.22
CHD3-214ENST00000572579 TAS2R9Q9NYW1 312 aa16.4■□□□□ 0.22
CHD3-214ENST00000572579 ST6GALNAC2Q9UJ37 374 aa16.4■□□□□ 0.22
CHD3-214ENST00000572579 A0A1W2PPR1 153 aa16.39■□□□□ 0.21
CHD3-214ENST00000572579 SMIM23A6NLE4 172 aa16.39■□□□□ 0.21
CHD3-214ENST00000572579 EEF1E1-BLOC1S5C9J1V9 151 aa16.39■□□□□ 0.21
CHD3-214ENST00000572579 EEF1E1O43324 174 aaKnown RBP16.39■□□□□ 0.21
CHD3-214ENST00000572579 RSL1D1O76021 490 aaKnown RBP16.39■□□□□ 0.21
CHD3-214ENST00000572579 IGKV1D-16P01601 117 aa16.39■□□□□ 0.21
CHD3-214ENST00000572579 CPA3P15088 417 aa16.39■□□□□ 0.21
CHD3-214ENST00000572579 DPP4P27487 766 aa16.39■□□□□ 0.21
CHD3-214ENST00000572579 EVI2BP34910 448 aa16.39■□□□□ 0.21
CHD3-214ENST00000572579 OPRM1P35372 400 aa16.39■□□□□ 0.21
CHD3-214ENST00000572579 GSTM5P46439 218 aa16.39■□□□□ 0.21
CHD3-214ENST00000572579 SLC18A2Q05940 514 aa16.39■□□□□ 0.21
CHD3-214ENST00000572579 SF3B4Q15427 424 aaKnown RBP eCLIP16.39■□□□□ 0.21
CHD3-214ENST00000572579 ZNF385BQ569K4 471 aa16.39■□□□□ 0.21
CHD3-214ENST00000572579 ZNF551Q7Z340 670 aaPredicted RBP16.39■□□□□ 0.21
CHD3-214ENST00000572579 IFNEQ86WN2 208 aa16.39■□□□□ 0.21
CHD3-214ENST00000572579 TDRPQ86YL5 185 aa16.39■□□□□ 0.21
CHD3-214ENST00000572579 C10orf107Q8IVU9 208 aa16.39■□□□□ 0.21
CHD3-214ENST00000572579 GCNT2Q8N0V5 402 aa16.39■□□□□ 0.21
CHD3-214ENST00000572579 OR2M3Q8NG83 312 aa16.39■□□□□ 0.21
CHD3-214ENST00000572579 FAM76AQ8TAV0 307 aa16.39■□□□□ 0.21
CHD3-214ENST00000572579 WNT2BQ93097 391 aa16.39■□□□□ 0.21
CHD3-214ENST00000572579 CCDC126Q96EE4 140 aa16.39■□□□□ 0.21
CHD3-214ENST00000572579 STMN4Q9H169 189 aaPredicted RBP16.39■□□□□ 0.21
CHD3-214ENST00000572579 DSN1Q9H410 356 aa16.39■□□□□ 0.21
CHD3-214ENST00000572579 GIMAP4Q9NUV9 329 aa16.39■□□□□ 0.21
CHD3-214ENST00000572579 MED11Q9P086 117 aa16.39■□□□□ 0.21
CHD3-214ENST00000572579 PLEKHA6Q9Y2H5 1048 aa16.39■□□□□ 0.21
CHD3-214ENST00000572579 ACANP16112 2415 aa16.38■□□□□ 0.21
CHD3-214ENST00000572579 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.38■□□□□ 0.21
CHD3-214ENST00000572579 GXYLT2A0PJZ3 443 aa16.38■□□□□ 0.21
CHD3-214ENST00000572579 CCDC151A5D8V7 595 aa16.38■□□□□ 0.21
CHD3-214ENST00000572579 H0Y3Z8 333 aa16.38■□□□□ 0.21
CHD3-214ENST00000572579 SCO2O43819 266 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms