RNA–Protein interactions for RNA: ENST00000572205.5

SMG6-210, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-210ENST00000572205 LAMP1P11279 417 aa7.94□□□□□ -1.14
SMG6-210ENST00000572205 G6PDP11413 515 aa7.94□□□□□ -1.14
SMG6-210ENST00000572205 NAGAP17050 411 aa7.94□□□□□ -1.14
SMG6-210ENST00000572205 EFNA1P20827 205 aaPredicted RBP7.94□□□□□ -1.14
SMG6-210ENST00000572205 GRK2P25098 689 aa7.94□□□□□ -1.14
SMG6-210ENST00000572205 PTPN6P29350 595 aa7.94□□□□□ -1.14
SMG6-210ENST00000572205 SLC1A6P48664 564 aa7.94□□□□□ -1.14
SMG6-210ENST00000572205 NCBP2P52298 156 aaKnown RBP eCLIP7.94□□□□□ -1.14
SMG6-210ENST00000572205 MLC1Q15049 377 aa7.94□□□□□ -1.14
SMG6-210ENST00000572205 KRTCAP3Q53RY4 240 aa7.94□□□□□ -1.14
SMG6-210ENST00000572205 DCST1Q5T197 706 aa7.94□□□□□ -1.14
SMG6-210ENST00000572205 AGBL2Q5U5Z8 902 aa7.94□□□□□ -1.14
SMG6-210ENST00000572205 RTL6Q6ICC9 239 aa7.94□□□□□ -1.14
SMG6-210ENST00000572205 OGFOD2Q6N063 350 aa7.94□□□□□ -1.14
SMG6-210ENST00000572205 ZAR1Q86SH2 424 aa7.94□□□□□ -1.14
SMG6-210ENST00000572205 FJX1Q86VR8 437 aa7.94□□□□□ -1.14
SMG6-210ENST00000572205 DOLPP1Q86YN1 238 aa7.94□□□□□ -1.14
SMG6-210ENST00000572205 DDIASQ8IXT1 998 aa7.94□□□□□ -1.14
SMG6-210ENST00000572205 SAMD14Q8IZD0 417 aaPredicted RBP7.94□□□□□ -1.14
SMG6-210ENST00000572205 SLC34A3Q8N130 599 aa7.94□□□□□ -1.14
SMG6-210ENST00000572205 GHDCQ8N2G8 530 aa7.94□□□□□ -1.14
SMG6-210ENST00000572205 FAM109AQ8N4B1 249 aa7.94□□□□□ -1.14
SMG6-210ENST00000572205 ANKRD42Q8N9B4 389 aa7.94□□□□□ -1.14
SMG6-210ENST00000572205 TMBIM1Q969X1 311 aa7.94□□□□□ -1.14
SMG6-210ENST00000572205 TMEM125Q96AQ2 219 aa7.94□□□□□ -1.14
SMG6-210ENST00000572205 COQ8BQ96D53 544 aa7.94□□□□□ -1.14
SMG6-210ENST00000572205 MTERF3Q96E29 417 aa7.94□□□□□ -1.14
SMG6-210ENST00000572205 HSPBAP1Q96EW2 488 aa7.94□□□□□ -1.14
SMG6-210ENST00000572205 TMEM41AQ96HV5 264 aa7.94□□□□□ -1.14
SMG6-210ENST00000572205 TEX37Q96LM6 180 aa7.94□□□□□ -1.14
SMG6-210ENST00000572205 PPP3R2Q96LZ3 170 aa7.94□□□□□ -1.14
SMG6-210ENST00000572205 RILPQ96NA2 401 aa7.94□□□□□ -1.14
SMG6-210ENST00000572205 KLHDC3Q9BQ90 382 aa7.94□□□□□ -1.14
SMG6-210ENST00000572205 AKTIPQ9H8T0 292 aa7.94□□□□□ -1.14
SMG6-210ENST00000572205 EML4Q9HC35 981 aaKnown RBP7.94□□□□□ -1.14
SMG6-210ENST00000572205 GALNT9Q9HCQ5 603 aa7.94□□□□□ -1.14
SMG6-210ENST00000572205 MIEF1Q9NQG6 463 aa7.94□□□□□ -1.14
SMG6-210ENST00000572205 ACSS1Q9NUB1 689 aaPredicted RBP7.94□□□□□ -1.14
SMG6-210ENST00000572205 ENTPD4Q9Y227 616 aa7.94□□□□□ -1.14
SMG6-210ENST00000572205 ZNF780BQ9Y6R6 833 aa7.94□□□□□ -1.14
SMG6-210ENST00000572205 VPS13CQ709C8 3753 aa7.94□□□□□ -1.14
SMG6-210ENST00000572205 A0A1B0GTH9 108 aa7.93□□□□□ -1.14
SMG6-210ENST00000572205 OR6C70A6NIJ9 312 aa7.93□□□□□ -1.14
SMG6-210ENST00000572205 TFECO14948 347 aaPredicted RBP7.93□□□□□ -1.14
SMG6-210ENST00000572205 AKAP10O43572 662 aa7.93□□□□□ -1.14
SMG6-210ENST00000572205 DYRK3O43781 588 aa7.93□□□□□ -1.14
SMG6-210ENST00000572205 FADS1O60427 444 aa7.93□□□□□ -1.14
SMG6-210ENST00000572205 ERLIN1O75477 346 aa7.93□□□□□ -1.14
SMG6-210ENST00000572205 CRCPO75575 148 aa7.93□□□□□ -1.14
SMG6-210ENST00000572205 NKX2-2O95096 273 aa7.93□□□□□ -1.14
SMG6-210ENST00000572205 HSPA4LO95757 839 aa7.93□□□□□ -1.14
SMG6-210ENST00000572205 IL12AP29459 219 aa7.93□□□□□ -1.14
SMG6-210ENST00000572205 GPC1P35052 558 aa7.93□□□□□ -1.14
SMG6-210ENST00000572205 MAN2A2P49641 1150 aa7.93□□□□□ -1.14
SMG6-210ENST00000572205 RNF144AP50876 292 aaPredicted RBP7.93□□□□□ -1.14
SMG6-210ENST00000572205 DCAF7P61962 342 aa7.93□□□□□ -1.14
SMG6-210ENST00000572205 PPIAP62937 165 aaKnown RBP7.93□□□□□ -1.14
SMG6-210ENST00000572205 EMX2Q04743 252 aa7.93□□□□□ -1.14
SMG6-210ENST00000572205 HSPB3Q12988 150 aa7.93□□□□□ -1.14
SMG6-210ENST00000572205 SMU1Q2TAY7 513 aa7.93□□□□□ -1.14
SMG6-210ENST00000572205 IL23RQ5VWK5 629 aa7.93□□□□□ -1.14
SMG6-210ENST00000572205 SLC22A10Q63ZE4 541 aa7.93□□□□□ -1.14
SMG6-210ENST00000572205 APOOLQ6UXV4 268 aa7.93□□□□□ -1.14
SMG6-210ENST00000572205 GK5Q6ZS86 529 aa7.93□□□□□ -1.14
SMG6-210ENST00000572205 FAM47EQ6ZV65 393 aa7.93□□□□□ -1.14
SMG6-210ENST00000572205 SEM1Q6ZVN7 128 aa7.93□□□□□ -1.14
SMG6-210ENST00000572205 CROCCP2Q86T23 111 aa7.93□□□□□ -1.14
SMG6-210ENST00000572205 LRRC34Q8IZ02 419 aa7.93□□□□□ -1.14
SMG6-210ENST00000572205 MEIOBQ8N635 442 aa7.93□□□□□ -1.14
SMG6-210ENST00000572205 WDSUB1Q8N9V3 476 aa7.93□□□□□ -1.14
SMG6-210ENST00000572205 FAM98AQ8NCA5 519 aaKnown RBP7.93□□□□□ -1.14
SMG6-210ENST00000572205 FAM13CQ8NE31 585 aa7.93□□□□□ -1.14
SMG6-210ENST00000572205 OR5M3Q8NGP4 307 aa7.93□□□□□ -1.14
SMG6-210ENST00000572205 RAB3IL1Q8TBN0 382 aa7.93□□□□□ -1.14
SMG6-210ENST00000572205 FAM57AQ8TBR7 257 aa7.93□□□□□ -1.14
SMG6-210ENST00000572205 FAM120BQ96EK7 910 aaKnown RBP7.93□□□□□ -1.14
SMG6-210ENST00000572205 NUF2Q9BZD4 464 aa7.93□□□□□ -1.14
SMG6-210ENST00000572205 STMN4Q9H169 189 aaPredicted RBP7.93□□□□□ -1.14
SMG6-210ENST00000572205 SLC6A15Q9H2J7 730 aa7.93□□□□□ -1.14
SMG6-210ENST00000572205 CENPHQ9H3R5 247 aa7.93□□□□□ -1.14
SMG6-210ENST00000572205 CXorf36Q9H7Y0 433 aa7.93□□□□□ -1.14
SMG6-210ENST00000572205 ZFP64Q9NPA5 681 aa7.93□□□□□ -1.14
SMG6-210ENST00000572205 GPATCH2Q9NW75 528 aa7.93□□□□□ -1.14
SMG6-210ENST00000572205 CNIH4Q9P003 139 aa7.93□□□□□ -1.14
SMG6-210ENST00000572205 TNFRSF10DQ9UBN6 386 aa7.93□□□□□ -1.14
SMG6-210ENST00000572205 PRODH2Q9UF12 536 aa7.93□□□□□ -1.14
SMG6-210ENST00000572205 BCAP29Q9UHQ4 241 aa7.93□□□□□ -1.14
SMG6-210ENST00000572205 PSME2Q9UL46 239 aa7.93□□□□□ -1.14
SMG6-210ENST00000572205 C15orf41Q9Y2V0 281 aa7.93□□□□□ -1.14
SMG6-210ENST00000572205 MEMO1Q9Y316 297 aa7.93□□□□□ -1.14
SMG6-210ENST00000572205 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.93□□□□□ -1.14
SMG6-210ENST00000572205 PKDREJQ9NTG1 2253 aa7.92□□□□□ -1.14
SMG6-210ENST00000572205 GXYLT2A0PJZ3 443 aa7.92□□□□□ -1.14
SMG6-210ENST00000572205 J3QL48 77 aa7.92□□□□□ -1.14
SMG6-210ENST00000572205 AQP7O14520 342 aa7.92□□□□□ -1.14
SMG6-210ENST00000572205 ICOSLGO75144 302 aa7.92□□□□□ -1.14
SMG6-210ENST00000572205 SNUPNO95149 360 aaKnown RBP7.92□□□□□ -1.14
SMG6-210ENST00000572205 CHEK2O96017 543 aa7.92□□□□□ -1.14
SMG6-210ENST00000572205 P04436 131 aa7.92□□□□□ -1.14
SMG6-210ENST00000572205 HPNP05981 417 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms