RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 GPATCH2Q9NW75 528 aa6.11□□□□□ -1.43
CTDNEP1-204ENST00000570484 NTMQ9P121 344 aa6.11□□□□□ -1.43
CTDNEP1-204ENST00000570484 TMEM181Q9P2C4 612 aa6.11□□□□□ -1.43
CTDNEP1-204ENST00000570484 SUCOQ9UBS9 1254 aaKnown RBP6.11□□□□□ -1.43
CTDNEP1-204ENST00000570484 DKK4Q9UBT3 224 aa6.11□□□□□ -1.43
CTDNEP1-204ENST00000570484 TEKT2Q9UIF3 430 aa6.11□□□□□ -1.43
CTDNEP1-204ENST00000570484 WASF3Q9UPY6 502 aa6.11□□□□□ -1.43
CTDNEP1-204ENST00000570484 LIPT1Q9Y234 373 aa6.11□□□□□ -1.43
CTDNEP1-204ENST00000570484 POLHQ9Y253 713 aa6.11□□□□□ -1.43
CTDNEP1-204ENST00000570484 RP1P56715 2156 aa6.11□□□□□ -1.43
CTDNEP1-204ENST00000570484 PCM1Q15154 2024 aa6.11□□□□□ -1.43
CTDNEP1-204ENST00000570484 ZNF292O60281 2723 aa6.1□□□□□ -1.43
CTDNEP1-204ENST00000570484 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.1□□□□□ -1.43
CTDNEP1-204ENST00000570484 ELOVL7A1L3X0 281 aa6.1□□□□□ -1.43
CTDNEP1-204ENST00000570484 ARGFXA6NJG6 315 aa6.1□□□□□ -1.43
CTDNEP1-204ENST00000570484 A8MVJ9 347 aa6.1□□□□□ -1.43
CTDNEP1-204ENST00000570484 H0YHG0 523 aa6.1□□□□□ -1.43
CTDNEP1-204ENST00000570484 HMGN4O00479 90 aa6.1□□□□□ -1.43
CTDNEP1-204ENST00000570484 ACOX3O15254 700 aa6.1□□□□□ -1.43
CTDNEP1-204ENST00000570484 PDE9AO76083 593 aa6.1□□□□□ -1.43
CTDNEP1-204ENST00000570484 IFNA14P01570 189 aa6.1□□□□□ -1.43
CTDNEP1-204ENST00000570484 SERPINA7P05543 415 aa6.1□□□□□ -1.43
CTDNEP1-204ENST00000570484 OR12D1P0DN82 309 aa6.1□□□□□ -1.43
CTDNEP1-204ENST00000570484 ACP2P11117 423 aa6.1□□□□□ -1.43
CTDNEP1-204ENST00000570484 HSD17B1P14061 328 aa6.1□□□□□ -1.43
CTDNEP1-204ENST00000570484 HPGDP15428 266 aa6.1□□□□□ -1.43
CTDNEP1-204ENST00000570484 GPX2P18283 190 aa6.1□□□□□ -1.43
CTDNEP1-204ENST00000570484 GABRA3P34903 492 aa6.1□□□□□ -1.43
CTDNEP1-204ENST00000570484 TRHRP34981 398 aaPredicted RBP6.1□□□□□ -1.43
CTDNEP1-204ENST00000570484 CASRP41180 1078 aa6.1□□□□□ -1.43
CTDNEP1-204ENST00000570484 GSK3BP49841 420 aa6.1□□□□□ -1.43
CTDNEP1-204ENST00000570484 EMDP50402 254 aa6.1□□□□□ -1.43
CTDNEP1-204ENST00000570484 GPR143P51810 404 aa6.1□□□□□ -1.43
CTDNEP1-204ENST00000570484 NR0B1P51843 470 aaKnown RBP6.1□□□□□ -1.43
CTDNEP1-204ENST00000570484 CORO7P57737 925 aa6.1□□□□□ -1.43
CTDNEP1-204ENST00000570484 RNF4P78317 190 aa6.1□□□□□ -1.43
CTDNEP1-204ENST00000570484 MRPS22P82650 360 aaKnown RBP6.1□□□□□ -1.43
CTDNEP1-204ENST00000570484 MGAT2Q10469 447 aa6.1□□□□□ -1.43
CTDNEP1-204ENST00000570484 AIMP2Q13155 320 aaKnown RBP6.1□□□□□ -1.43
CTDNEP1-204ENST00000570484 FLOT2Q14254 428 aa6.1□□□□□ -1.43
CTDNEP1-204ENST00000570484 DUSP5Q16690 384 aa6.1□□□□□ -1.43
CTDNEP1-204ENST00000570484 VMACQ2NL98 169 aa6.1□□□□□ -1.43
CTDNEP1-204ENST00000570484 LRRC23Q53EV4 343 aaPredicted RBP6.1□□□□□ -1.43
CTDNEP1-204ENST00000570484 DCAF10Q5QP82 559 aa6.1□□□□□ -1.43
CTDNEP1-204ENST00000570484 JMJD6Q6NYC1 403 aaPredicted RBP6.1□□□□□ -1.43
CTDNEP1-204ENST00000570484 C8orf82Q6P1X6 216 aaPredicted RBP6.1□□□□□ -1.43
CTDNEP1-204ENST00000570484 UNQ6494/PRO21346Q6UXR6 183 aa6.1□□□□□ -1.43
CTDNEP1-204ENST00000570484 CCDC81Q6ZN84 652 aa6.1□□□□□ -1.43
CTDNEP1-204ENST00000570484 ERMP1Q7Z2K6 904 aa6.1□□□□□ -1.43
CTDNEP1-204ENST00000570484 WDR53Q7Z5U6 358 aaPredicted RBP6.1□□□□□ -1.43
CTDNEP1-204ENST00000570484 HPS6Q86YV9 775 aa6.1□□□□□ -1.43
CTDNEP1-204ENST00000570484 SLC15A3Q8IY34 581 aa6.1□□□□□ -1.43
CTDNEP1-204ENST00000570484 MICU2Q8IYU8 434 aa6.1□□□□□ -1.43
CTDNEP1-204ENST00000570484 FBXW8Q8N3Y1 598 aa6.1□□□□□ -1.43
CTDNEP1-204ENST00000570484 METTL25Q8N6Q8 603 aa6.1□□□□□ -1.43
CTDNEP1-204ENST00000570484 ZNF321PQ8N8H1 164 aa6.1□□□□□ -1.43
CTDNEP1-204ENST00000570484 ZNF615Q8N8J6 731 aa6.1□□□□□ -1.43
CTDNEP1-204ENST00000570484 TMEM102Q8N9M5 508 aaPredicted RBP6.1□□□□□ -1.43
CTDNEP1-204ENST00000570484 ZNF527Q8NB42 609 aa6.1□□□□□ -1.43
CTDNEP1-204ENST00000570484 SLC16A11Q8NCK7 471 aa6.1□□□□□ -1.43
CTDNEP1-204ENST00000570484 APCDD1LQ8NCL9 501 aa6.1□□□□□ -1.43
CTDNEP1-204ENST00000570484 HIPK4Q8NE63 616 aa6.1□□□□□ -1.43
CTDNEP1-204ENST00000570484 C17orf47Q8NEP4 570 aa6.1□□□□□ -1.43
CTDNEP1-204ENST00000570484 NFKBIDQ8NI38 313 aa6.1□□□□□ -1.43
CTDNEP1-204ENST00000570484 BBS10Q8TAM1 723 aa6.1□□□□□ -1.43
CTDNEP1-204ENST00000570484 NUBPLQ8TB37 319 aa6.1□□□□□ -1.43
CTDNEP1-204ENST00000570484 SLC26A7Q8TE54 656 aa6.1□□□□□ -1.43
CTDNEP1-204ENST00000570484 THAP3Q8WTV1 239 aaPredicted RBP6.1□□□□□ -1.43
CTDNEP1-204ENST00000570484 ZCCHC14Q8WYQ9 949 aaKnown RBP6.1□□□□□ -1.43
CTDNEP1-204ENST00000570484 FIG4Q92562 907 aa6.1□□□□□ -1.43
CTDNEP1-204ENST00000570484 RAB8BQ92930 207 aa6.1□□□□□ -1.43
CTDNEP1-204ENST00000570484 ASB9Q96DX5 294 aa6.1□□□□□ -1.43
CTDNEP1-204ENST00000570484 GIMAP5Q96F15 307 aa6.1□□□□□ -1.43
CTDNEP1-204ENST00000570484 RSRC1Q96IZ7 334 aaKnown RBP6.1□□□□□ -1.43
CTDNEP1-204ENST00000570484 THOC3Q96J01 351 aaKnown RBP6.1□□□□□ -1.43
CTDNEP1-204ENST00000570484 LCORQ96JN0 433 aaPredicted RBP6.1□□□□□ -1.43
CTDNEP1-204ENST00000570484 VSTM2LQ96N03 204 aa6.1□□□□□ -1.43
CTDNEP1-204ENST00000570484 ZNF607Q96SK3 696 aa6.1□□□□□ -1.43
CTDNEP1-204ENST00000570484 WDR77Q9BQA1 342 aaPredicted RBP6.1□□□□□ -1.43
CTDNEP1-204ENST00000570484 MESP1Q9BRJ9 268 aa6.1□□□□□ -1.43
CTDNEP1-204ENST00000570484 LMF2Q9BU23 707 aaKnown RBP6.1□□□□□ -1.43
CTDNEP1-204ENST00000570484 G6PC3Q9BUM1 346 aa6.1□□□□□ -1.43
CTDNEP1-204ENST00000570484 SPATA5L1Q9BVQ7 753 aa6.1□□□□□ -1.43
CTDNEP1-204ENST00000570484 BTBD2Q9BX70 525 aa6.1□□□□□ -1.43
CTDNEP1-204ENST00000570484 CADM1Q9BY67 442 aaKnown RBP6.1□□□□□ -1.43
CTDNEP1-204ENST00000570484 TRIM4Q9C037 500 aa6.1□□□□□ -1.43
CTDNEP1-204ENST00000570484 SEMA4CQ9C0C4 833 aa6.1□□□□□ -1.43
CTDNEP1-204ENST00000570484 PIGUQ9H490 435 aa6.1□□□□□ -1.43
CTDNEP1-204ENST00000570484 TMEM38AQ9H6F2 299 aa6.1□□□□□ -1.43
CTDNEP1-204ENST00000570484 EPS8L2Q9H6S3 715 aa6.1□□□□□ -1.43
CTDNEP1-204ENST00000570484 MMP25Q9NPA2 562 aa6.1□□□□□ -1.43
CTDNEP1-204ENST00000570484 A4GALTQ9NPC4 353 aa6.1□□□□□ -1.43
CTDNEP1-204ENST00000570484 CMTM6Q9NX76 183 aa6.1□□□□□ -1.43
CTDNEP1-204ENST00000570484 GIN1Q9NXP7 522 aa6.1□□□□□ -1.43
CTDNEP1-204ENST00000570484 ZNF639Q9UID6 485 aa6.1□□□□□ -1.43
CTDNEP1-204ENST00000570484 SLC13A4Q9UKG4 626 aa6.1□□□□□ -1.43
CTDNEP1-204ENST00000570484 CBLCQ9ULV8 474 aa6.1□□□□□ -1.43
CTDNEP1-204ENST00000570484 PPIEQ9UNP9 301 aaKnown RBP6.1□□□□□ -1.43
CTDNEP1-204ENST00000570484 DTX4Q9Y2E6 619 aa6.1□□□□□ -1.43
CTDNEP1-204ENST00000570484 WDR45Q9Y484 360 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms